View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4338_low_6 (Length: 222)
Name: NF4338_low_6
Description: NF4338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4338_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 32096904 - 32096719
Alignment:
| Q |
22 |
tcccaatgcctcctcaaatacatcctcttcacagtcccatacctccacaccaaaaaccatgacgaaacctcccctcaaactcatgatgcaggcgttgacc |
121 |
Q |
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| T |
32096904 |
tcccaatgcctcctcaaatacatcctcttcacagtcccatacctccacaccaaaaaccatgacgaaacctcccctcaaactcatgatgcaggcgttgacc |
32096805 |
T |
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| Q |
122 |
cctcctccaagttacgcggcaagggaacaccgcaagacgagctgagcgccaaccatgtcctcgcggagcgacgaagaagagagaaa |
207 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32096804 |
cctcctccaagttacgtggcaagggaacaccgcaagacgagctgagcgccaaccatgtcctcgcggagcgacgaagaagagagaaa |
32096719 |
T |
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