View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4343-Insertion-6 (Length: 347)
Name: NF4343-Insertion-6
Description: NF4343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4343-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 24 - 347
Target Start/End: Original strand, 1923413 - 1923741
Alignment:
| Q |
24 |
gtcacttctatatatagttgttctaaattcaatgt-----gatgatgcatgtacgcactctcaatatgattcaacatgtggtaacacaatttgatggttt |
118 |
Q |
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| T |
1923413 |
gtcacttctatatatagttgttctaaattcaatgtgatgtgatgatgcatgtacgcactctcaatatgattcaacatgtggtaacacaatttgatggttt |
1923512 |
T |
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| Q |
119 |
ggctaaaagttaagcaactctttgtatcgaaattatttgttagaactaattaagattattccaatacaatgcttaattaatcttgatattctgatgataa |
218 |
Q |
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| T |
1923513 |
ggctaaaagttaagcaactctttgtatcgaaattatttgttagaactaattaagattattcaaatagaatgcttaattaatcttgatattttgatgataa |
1923612 |
T |
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| Q |
219 |
caatgcaagtgaataatatgccctctcacatttgctcaagtgttgagagaaataatatcttgactaaaattactaattagtttcagagttctctttagat |
318 |
Q |
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| T |
1923613 |
caatgcaagtgaataatttgccctctcacatttgctcaagtgttgagagaaataatatcttgactaaaattactaattagtttcagagttctctttagat |
1923712 |
T |
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| Q |
319 |
ttaaatttgaataaggtttcaattgttaa |
347 |
Q |
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| T |
1923713 |
ttaaatttgaataagatttcaattgttaa |
1923741 |
T |
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