View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4344_low_4 (Length: 243)
Name: NF4344_low_4
Description: NF4344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4344_low_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 37259781 - 37259546
Alignment:
| Q |
11 |
attctggaatgcaattgaaattttatattgtcgtcaaaccctttattaacaca-----cacaaggcctttcatattttatttacgtgggacggctcatat |
105 |
Q |
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| T |
37259781 |
attctggaatgcaattgaaattttatattgtcgtcaaaccctttattaacacaacacacacaaggcctttcatattttatttacgtgggacggctcatat |
37259682 |
T |
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| Q |
106 |
atcttattattattatttttacgatatgatttctttctttaatttgaatgcaccaaaaaaggtataatccataatagtaattgattccactaattaatcc |
205 |
Q |
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| T |
37259681 |
--cttattattattatttttacgatatgatttctttctttaatttgaatgcaccaaaagaggtataatccataatagtaattgattccactaattaatcc |
37259584 |
T |
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| Q |
206 |
aatttgacttgttctctacttctccttattaccaattc |
243 |
Q |
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| T |
37259583 |
aattttacttgttctctacttctccttattactaattc |
37259546 |
T |
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