View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4346-Insertion-15 (Length: 155)
Name: NF4346-Insertion-15
Description: NF4346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4346-Insertion-15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 124; Significance: 4e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 43331678 - 43331531
Alignment:
| Q |
8 |
attacgagtataataggagtgtgtacacaatgattatatactaatgtgctctaataaaaatctcactcatcataaataacatgtatttgtgcttgtccaa |
107 |
Q |
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| T |
43331678 |
attacgagtataataggagtgtgtacacaatgattatatagtaatgcgctctaataaaaatatcactcatcataaatagcatgtatttgcgcttgtccaa |
43331579 |
T |
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| Q |
108 |
tctttcatcggtggagagaaatttgtctgaacctaaatcgtatgtgtg |
155 |
Q |
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| T |
43331578 |
tctatcatcggtggagagaaatttgtctgaacctaaatcgtatgtgtg |
43331531 |
T |
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Target: chr2 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 6814807 - 6814846
Alignment:
| Q |
25 |
agtgtgtacacaatgattatatactaatgtgctctaataa |
64 |
Q |
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| T |
6814807 |
agtgtgtacacaatggttatataataatgagctctaataa |
6814846 |
T |
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