View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4347-Insertion-11 (Length: 261)
Name: NF4347-Insertion-11
Description: NF4347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4347-Insertion-11 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 48110039 - 48109784
Alignment:
| Q |
8 |
atatctaaactttctggtaatta---tatctttgatgttcaataattaatgcagcacaaacaaatgctattgcaatcannnnnnnnnngtgcaatgccaa |
104 |
Q |
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| T |
48110039 |
atatctaaactttctgataattagtatttctttgatgttcaataattaatgcagcacaaacaaatgctattgcaat-aatttatttttgtgcaatgccaa |
48109941 |
T |
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| Q |
105 |
ttccaaatcatttgaatggaccattataccaaaacacaagcaacagttgttgatgttttcttttctccgcgggtctgttctggagtcacaatcataaaaa |
204 |
Q |
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| T |
48109940 |
ttccaaatcatttgaatggaccattataccaaaacacaagcaacagttgttgatgttttcttttctccgcgggtctgttctggagtcacaatcataaaaa |
48109841 |
T |
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| Q |
205 |
ttgacaactcatataagtcataaccnnnnnnnctctgttcttcaaaaacagtgtatg |
261 |
Q |
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| T |
48109840 |
ttgacaactcatataagtcataacctttttttctctgttcttcaaaaacagtgtatg |
48109784 |
T |
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