View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4347-Insertion-4 (Length: 541)
Name: NF4347-Insertion-4
Description: NF4347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4347-Insertion-4 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 534; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 534; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 35816201 - 35815668
Alignment:
| Q |
8 |
aaaatatcattcctaacaatttcaacattctcatcagtttcaccaaaaagtaaagaatgcatcatcccatcaaacaccttaatagtcttatcatcactcc |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35816201 |
aaaatatcattcctaacaatttcaacattctcatcagtttcaccaaaaagtaaagaatgcatcatcccatcaaacaccttaatagtcttatcatcactcc |
35816102 |
T |
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| Q |
108 |
tagcttcttcatacaattctctactaacctcaggatcagtaacaacatcagcactaccatgcaacacaataaaaggtagttcaacatcacaaagcttcct |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35816101 |
tagcttcttcatacaattctctactaacctcaggatcagtaacaacatcagcactaccatgcaacacaataaaaggtagttcaacatcacaaagcttcct |
35816002 |
T |
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| Q |
208 |
actcaaaatatcagtaaccctcaaaagctccaccacagtccctaacctaggtttccctctatatctcaaaggattcatttgagcaataaccttcttatga |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35816001 |
actcaaaatatcagtaaccctcaaaagctccaccacagtccctaacctaggtttccctctatatctcaaaggattcatttgagcaataaccttcttatga |
35815902 |
T |
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| Q |
308 |
tcaactttcacagacttatacaaaagatcaggtgtaggaacaataggcaaagttggaaagaatttagctaaaaaagttaaaatctgaggaattggccatt |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35815901 |
tcaactttcacagacttatacaaaagatcaggtgtaggaacaataggcaaagttggaaagaatttagctaaaaaagttaaaatctgaggaattggccatt |
35815802 |
T |
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| Q |
408 |
tgggtctaaccttatcagagattttacacatgggtgctaccaaaatagcaccttgaaacccttttggatcagcaaaatgaatcaaaagactaatagcacc |
507 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35815801 |
tgggtctaaccttatcagagattttacacatgggtgctaccaaaatagcaccttgaaacccttttggatcagcaaaatgaatcaaaagactaatagcacc |
35815702 |
T |
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| Q |
508 |
acccattgattcaccatataaaaaacaaggcaac |
541 |
Q |
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| T |
35815701 |
acccattgattcaccatataaaaaacaaggcaac |
35815668 |
T |
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