View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4347_high_4 (Length: 250)
Name: NF4347_high_4
Description: NF4347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4347_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 19218495 - 19218715
Alignment:
| Q |
1 |
taacgaggggacatatcagtatcttccgaggaactgagtcctcgaaacgctgaggaatatgaatgttccaatgagatcgttggcaggaacattgggcacg |
100 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19218495 |
taacgaggggacatatcagtatcttccgtggaactgagtcctcgaaacgctgaggaatatgaatgttccaatgagatcgttggcaggaacattgggcacg |
19218594 |
T |
|
| Q |
101 |
catttggagagcacttttcgaggttactgttacacacttcccttaattagaccatcaacaaggctcatcctgatgatcacatttttgtaccacactaagc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19218595 |
catttggagagcacttttcgaggttactgttacacacttccctcaattagaccatcaacaaggctcatcctgatgatcacatttttgtaccacactaagc |
19218694 |
T |
|
| Q |
201 |
aaatctcaatgtcttttcttc |
221 |
Q |
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|||||||||| |||||||||| |
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| T |
19218695 |
aaatctcaatatcttttcttc |
19218715 |
T |
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