View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4347_low_8 (Length: 239)
Name: NF4347_low_8
Description: NF4347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4347_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 947290 - 947074
Alignment:
| Q |
23 |
ggcagtgtctgaagtgggaaacaagcaggttatattcaaaggatacatagatggaattcctaaagagactgatatggaactcaatttttcaaataatatt |
122 |
Q |
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| T |
947290 |
ggcagtgtctgaagtgggaaacaagcaggttatattcaaaggatacatagatggaattcctaaagagacagatatggaactcaatttttcaaataatatt |
947191 |
T |
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| Q |
123 |
caattcaatcaacaacttccatcacaagctcttcttgtcaaaaatctttatctctcatgtgatccatatatgcgtggtcgtatgcgtgattttcatggat |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
947190 |
caattcaatcaacaacttccatcacaagctcttcttgtcaaaaatctttatctctcatgtgatccatatatgcgtggtcgtatgcgtgattttcatggat |
947091 |
T |
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| Q |
223 |
cttatattcctcctttt |
239 |
Q |
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||||||||||||||||| |
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| T |
947090 |
cttatattcctcctttt |
947074 |
T |
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