View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4352-Insertion-10 (Length: 71)
Name: NF4352-Insertion-10
Description: NF4352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4352-Insertion-10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 65; Significance: 3e-29; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-29
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 43186722 - 43186658
Alignment:
| Q |
7 |
attttaaacacagttcgctaaccaaactgcaccagaaagaacaatttgcaccatagttcacaaat |
71 |
Q |
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| T |
43186722 |
attttaaacacagttcgctaaccaaactgcaccagaaagaacaatttgcaccatagttcacaaat |
43186658 |
T |
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Target: chr4 (Bit Score: 28; Significance: 0.0000003; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 28; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 17207002 - 17206955
Alignment:
| Q |
11 |
taaacacagttcgctaaccaaactgcaccagaaagaacaatttgcacc |
58 |
Q |
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| T |
17207002 |
taaacacagtttgcaaaacaaactgtactagaaagaacaatttgcacc |
17206955 |
T |
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