View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4353-Insertion-9 (Length: 350)
Name: NF4353-Insertion-9
Description: NF4353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4353-Insertion-9 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 8 - 350
Target Start/End: Original strand, 3039919 - 3040261
Alignment:
| Q |
8 |
agctattcgaggatggtgatattcctagacagagaaaatttatgggtacagaagaatttatttttggatgaattgcataaggtaagaccaaataggccct |
107 |
Q |
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| T |
3039919 |
agctatttgaggatggtgataatcctagacagggaaaatttatgggtacagaagaatttatttttggatgaattgcataaggtaagaccaaataggccct |
3040018 |
T |
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| Q |
108 |
tacagtttctatgtaaacccttatttcaaccttcacatgatcactctgcttctctttatgacattgactttatattcacttcaactagagaataaaactt |
207 |
Q |
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| T |
3040019 |
tacagtttctatgtaaacccttatttcaaccttcacatggtcactctgcttctctttatgacattgactttatattcacttcaactagagaataaaactt |
3040118 |
T |
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| Q |
208 |
gtcattttgtttcacaataatgatgttctgttctgtctatatgactagatgtaaccgatccaacaaatctacaagtttcaccagaagcagattttgttga |
307 |
Q |
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| T |
3040119 |
gtcattttgtttcacaataatgatgttctgttctgtctatatgactagatgtaaccgatccaacaaatgtacaagtttcaccagaagcagattttgttga |
3040218 |
T |
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| Q |
308 |
accaaaattatttaaattataagagacagtagtcataccactc |
350 |
Q |
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| T |
3040219 |
accaaaattgtttaaattataagagacagtattcataccactc |
3040261 |
T |
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