View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4354-Insertion-1 (Length: 1081)

Name: NF4354-Insertion-1
Description: NF4354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4354-Insertion-1
NF4354-Insertion-1
[»] chr1 (93 HSPs)
chr1 (490-976)||(17475364-17475833)
chr1 (308-428)||(17475895-17476015)
chr1 (680-972)||(52699513-52699799)
chr1 (665-972)||(5518551-5518852)
chr1 (518-656)||(38811189-38811330)
chr1 (672-972)||(13653581-13653876)
chr1 (666-955)||(20260150-20260434)
chr1 (664-955)||(46960350-46960635)
chr1 (664-972)||(52630495-52630798)
chr1 (668-972)||(48916069-48916368)
chr1 (667-954)||(37436686-37436966)
chr1 (665-955)||(46666431-46666716)
chr1 (664-755)||(12190436-12190527)
chr1 (664-955)||(8331736-8332022)
chr1 (664-959)||(14788445-14788735)
chr1 (665-976)||(24116380-24116683)
chr1 (666-972)||(9115561-9115862)
chr1 (666-972)||(25789487-25789788)
chr1 (665-755)||(5806535-5806625)
chr1 (665-754)||(6911208-6911297)
chr1 (663-755)||(25473976-25474068)
chr1 (668-972)||(31806803-31807093)
chr1 (669-955)||(51445144-51445424)
chr1 (667-972)||(1597389-1597689)
chr1 (842-972)||(2430387-2430521)
chr1 (668-754)||(9832130-9832216)
chr1 (665-755)||(36361506-36361596)
chr1 (842-959)||(39329499-39329620)
chr1 (665-755)||(47031582-47031672)
chr1 (666-755)||(38964938-38965027)
chr1 (842-955)||(32824812-32824930)
chr1 (666-754)||(39930181-39930269)
chr1 (842-972)||(3572612-3572746)
chr1 (842-972)||(9831917-9832051)
chr1 (842-972)||(12190224-12190358)
chr1 (843-972)||(13521213-13521346)
chr1 (843-972)||(19083152-19083285)
chr1 (843-972)||(19131040-19131173)
chr1 (842-972)||(47037348-47037482)
chr1 (665-754)||(29091395-29091484)
chr1 (665-754)||(32824644-32824733)
chr1 (669-972)||(4683421-4683718)
chr1 (842-972)||(39930348-39930482)
chr1 (668-755)||(2430223-2430310)
chr1 (665-972)||(9011208-9011511)
chr1 (665-755)||(45771815-45771905)
chr1 (667-747)||(32202580-32202660)
chr1 (842-972)||(13440285-13440420)
chr1 (802-972)||(20505036-20505213)
chr1 (842-972)||(36361674-36361807)
chr1 (665-755)||(50191023-50191113)
chr1 (842-972)||(11014488-11014622)
chr1 (668-752)||(13932134-13932218)
chr1 (326-428)||(38811006-38811104)
chr1 (666-952)||(47677368-47677648)
chr1 (842-972)||(6978661-6978795)
chr1 (842-955)||(2632744-2632860)
chr1 (669-755)||(38519319-38519405)
chr1 (867-966)||(1007663-1007766)
chr1 (854-972)||(29091569-29091691)
chr1 (845-972)||(35187350-35187481)
chr1 (668-755)||(1228138-1228225)
chr1 (773-972)||(30240832-30241034)
chr1 (842-972)||(38964726-38964860)
chr1 (867-955)||(13931948-13932039)
chr1 (667-721)||(39329347-39329401)
chr1 (664-742)||(49627296-49627374)
chr1 (842-951)||(50190833-50190945)
chr1 (665-745)||(2632576-2632656)
chr1 (895-972)||(52186093-52186172)
chr1 (670-715)||(49824022-49824067)
chr1 (667-755)||(19923722-19923810)
chr1 (668-743)||(35187181-35187257)
chr1 (822-959)||(29769382-29769524)
chr1 (664-743)||(37261541-37261620)
chr1 (667-746)||(52186265-52186344)
chr1 (842-955)||(6911376-6911501)
chr1 (665-719)||(37726805-37726859)
chr1 (922-968)||(37726999-37727045)
chr1 (681-755)||(45813653-45813727)
chr1 (924-972)||(3939517-3939565)
chr1 (919-971)||(37261819-37261871)
chr1 (666-700)||(1007539-1007573)
chr1 (842-906)||(32202428-32202494)
chr1 (668-746)||(48462258-48462336)
chr1 (924-970)||(52276895-52276941)
chr1 (666-727)||(3939225-3939286)
chr1 (772-971)||(38519110-38519312)
chr1 (927-972)||(49822964-49823009)
chr1 (842-897)||(49823021-49823077)
chr1 (707-755)||(49823155-49823203)
chr1 (922-976)||(45772056-45772110)
chr1 (664-697)||(6978519-6978552)
[»] chr4 (84 HSPs)
chr4 (489-665)||(55875202-55875378)
chr4 (665-972)||(13230036-13230338)
chr4 (666-966)||(7258691-7258985)
chr4 (667-955)||(27762963-27763246)
chr4 (665-972)||(39730340-39730642)
chr4 (664-959)||(55968060-55968350)
chr4 (664-972)||(25932166-25932469)
chr4 (665-972)||(35999412-35999714)
chr4 (664-955)||(41859111-41859396)
chr4 (664-972)||(43722989-43723292)
chr4 (664-972)||(45595993-45596296)
chr4 (672-972)||(48518938-48519233)
chr4 (665-972)||(51968505-51968805)
chr4 (667-972)||(41744267-41744568)
chr4 (665-972)||(48879051-48879353)
chr4 (664-755)||(47670087-47670178)
chr4 (665-755)||(45748054-45748144)
chr4 (659-971)||(18405282-18405588)
chr4 (666-755)||(31938128-31938217)
chr4 (664-955)||(42773673-42773959)
chr4 (664-755)||(27555152-27555243)
chr4 (667-972)||(40435628-40435928)
chr4 (842-959)||(6279981-6280102)
chr4 (665-972)||(8321971-8322273)
chr4 (665-755)||(39835566-39835656)
chr4 (781-976)||(18405586-18405785)
chr4 (666-743)||(36860027-36860104)
chr4 (842-972)||(34049644-34049778)
chr4 (842-972)||(45747843-45747977)
chr4 (665-748)||(48873747-48873830)
chr4 (842-972)||(50672952-50673086)
chr4 (668-754)||(18931482-18931568)
chr4 (665-755)||(23686513-23686603)
chr4 (292-428)||(55875008-55875141)
chr4 (773-954)||(36858441-36858627)
chr4 (666-976)||(38394634-38394938)
chr4 (664-755)||(935851-935942)
chr4 (842-955)||(936020-936137)
chr4 (842-955)||(25916097-25916214)
chr4 (673-755)||(50673163-50673245)
chr4 (665-754)||(6280181-6280270)
chr4 (673-754)||(34238214-34238295)
chr4 (842-972)||(23686681-23686815)
chr4 (842-959)||(27942631-27942752)
chr4 (842-955)||(34238018-34238135)
chr4 (842-954)||(39835372-39835488)
chr4 (842-972)||(18931647-18931781)
chr4 (773-972)||(38414032-38414234)
chr4 (842-972)||(47670256-47670390)
chr4 (665-755)||(32953249-32953339)
chr4 (664-755)||(18405128-18405218)
chr4 (842-972)||(32953417-32953551)
chr4 (665-755)||(38413902-38413992)
chr4 (667-755)||(27942465-27942553)
chr4 (666-754)||(30790275-30790362)
chr4 (842-963)||(31937925-31938051)
chr4 (924-976)||(44309740-44309792)
chr4 (867-972)||(30415821-30415930)
chr4 (669-755)||(52469427-52469514)
chr4 (842-959)||(52469592-52469713)
chr4 (673-755)||(37014642-37014724)
chr4 (665-721)||(25916305-25916362)
chr4 (924-972)||(12275958-12276006)
chr4 (666-754)||(36858135-36858222)
chr4 (842-959)||(47426301-47426423)
chr4 (923-976)||(24805128-24805181)
chr4 (924-972)||(10400852-10400900)
chr4 (924-972)||(27555390-27555438)
chr4 (707-755)||(34049856-34049904)
chr4 (842-972)||(39498719-39498853)
chr4 (842-972)||(39502058-39502192)
chr4 (601-665)||(55875388-55875452)
chr4 (772-972)||(18094072-18094277)
chr4 (924-961)||(26165344-26165381)
chr4 (924-972)||(22654524-22654572)
chr4 (842-897)||(27555320-27555376)
chr4 (703-755)||(39498589-39498641)
chr4 (703-755)||(39501928-39501980)
chr4 (842-897)||(48873915-48873971)
chr4 (924-970)||(9327294-9327341)
chr4 (924-970)||(9374053-9374100)
chr4 (928-971)||(54478529-54478572)
chr4 (669-718)||(32713384-32713433)
chr4 (842-953)||(37014451-37014566)
[»] chr3 (63 HSPs)
chr3 (489-665)||(36122110-36122286)
chr3 (665-952)||(8476375-8476657)
chr3 (665-972)||(53165772-53166073)
chr3 (666-972)||(28770257-28770557)
chr3 (665-972)||(26848744-26849046)
chr3 (665-972)||(33217960-33218262)
chr3 (669-959)||(31611045-31611330)
chr3 (664-972)||(11239167-11239470)
chr3 (662-754)||(46359671-46359763)
chr3 (669-955)||(47114921-47115202)
chr3 (667-972)||(1098923-1099222)
chr3 (772-976)||(33647746-33647954)
chr3 (664-755)||(6832181-6832272)
chr3 (664-755)||(40907987-40908078)
chr3 (665-755)||(44952030-44952120)
chr3 (664-972)||(48339804-48340107)
chr3 (665-754)||(6231761-6231850)
chr3 (667-755)||(20414724-20414812)
chr3 (664-972)||(20297514-20297817)
chr3 (666-972)||(27822994-27823298)
chr3 (842-972)||(40908155-40908289)
chr3 (668-754)||(24783934-24784020)
chr3 (667-972)||(31435970-31436269)
chr3 (668-893)||(40584336-40584551)
chr3 (842-955)||(46359842-46359959)
chr3 (668-971)||(43132205-43132502)
chr3 (842-972)||(6231548-6231682)
chr3 (666-954)||(9320513-9320797)
chr3 (664-755)||(10822976-10823067)
chr3 (842-972)||(44952198-44952332)
chr3 (669-755)||(6927817-6927903)
chr3 (672-965)||(38140422-38140710)
chr3 (665-754)||(24574289-24574378)
chr3 (668-755)||(43719184-43719271)
chr3 (667-753)||(32070994-32071080)
chr3 (667-755)||(26849404-26849492)
chr3 (667-747)||(29512324-29512404)
chr3 (842-972)||(28124483-28124617)
chr3 (844-972)||(12228303-12228434)
chr3 (292-424)||(36122346-36122480)
chr3 (667-955)||(12931005-12931287)
chr3 (844-972)||(10822765-10822897)
chr3 (670-755)||(49216027-49216112)
chr3 (842-965)||(18460829-18460956)
chr3 (671-755)||(28124695-28124779)
chr3 (842-971)||(2565508-2565640)
chr3 (667-754)||(12228514-12228601)
chr3 (842-955)||(20414529-20414646)
chr3 (773-954)||(32071267-32071450)
chr3 (842-972)||(24574457-24574599)
chr3 (677-752)||(27093763-27093838)
chr3 (672-754)||(18460582-18460664)
chr3 (842-934)||(19533034-19533130)
chr3 (894-972)||(1246949-1247029)
chr3 (924-961)||(6832014-6832051)
chr3 (671-755)||(21925780-21925864)
chr3 (923-972)||(26085691-26085741)
chr3 (934-972)||(26849202-26849240)
chr3 (923-972)||(28139767-28139816)
chr3 (664-749)||(28693696-28693781)
chr3 (671-752)||(33650276-33650357)
chr3 (664-700)||(19532910-19532946)
chr3 (773-816)||(33650222-33650265)
[»] chr2 (79 HSPs)
chr2 (489-665)||(40567528-40567704)
chr2 (664-972)||(45693910-45694212)
chr2 (668-972)||(28311744-28312042)
chr2 (668-972)||(37233155-37233453)
chr2 (665-972)||(346392-346694)
chr2 (664-955)||(2050587-2050873)
chr2 (665-972)||(6171513-6171815)
chr2 (664-955)||(4559280-4559566)
chr2 (773-972)||(1988132-1988335)
chr2 (665-972)||(11071327-11071629)
chr2 (665-963)||(40569740-40570035)
chr2 (666-972)||(20426530-20426830)
chr2 (665-755)||(14777757-14777847)
chr2 (664-955)||(42674725-42675011)
chr2 (668-954)||(3902182-3902462)
chr2 (667-959)||(17965707-17965994)
chr2 (664-972)||(37192243-37192546)
chr2 (665-972)||(37533675-37533976)
chr2 (665-755)||(41729389-41729479)
chr2 (668-972)||(14832536-14832834)
chr2 (666-754)||(5770370-5770458)
chr2 (842-955)||(41729194-41729311)
chr2 (665-742)||(23943885-23943962)
chr2 (842-972)||(14253412-14253546)
chr2 (667-755)||(39819414-39819502)
chr2 (667-754)||(638318-638405)
chr2 (842-972)||(5770157-5770291)
chr2 (668-755)||(13760692-13760779)
chr2 (673-959)||(27358023-27358303)
chr2 (842-972)||(41750419-41750553)
chr2 (842-972)||(638484-638617)
chr2 (842-955)||(2521565-2521682)
chr2 (842-955)||(14777562-14777679)
chr2 (664-754)||(21737668-21737758)
chr2 (665-755)||(40951118-40951208)
chr2 (670-755)||(9734105-9734190)
chr2 (665-972)||(18713704-18714005)
chr2 (842-972)||(40950906-40951040)
chr2 (842-972)||(9733893-9734027)
chr2 (667-972)||(5002884-5003182)
chr2 (669-747)||(26309993-26310071)
chr2 (673-886)||(4875506-4875710)
chr2 (842-950)||(23944053-23944165)
chr2 (864-972)||(34356747-34356859)
chr2 (673-972)||(45408981-45409274)
chr2 (671-754)||(13790018-13790101)
chr2 (677-751)||(11763663-11763737)
chr2 (367-424)||(40567760-40567817)
chr2 (842-972)||(21737447-21737589)
chr2 (842-972)||(26310157-26310293)
chr2 (894-959)||(25454968-25455035)
chr2 (704-755)||(2521436-2521487)
chr2 (842-972)||(11763418-11763552)
chr2 (842-972)||(39995178-39995320)
chr2 (669-755)||(3254351-3254437)
chr2 (665-755)||(7007307-7007397)
chr2 (673-726)||(2521381-2521434)
chr2 (690-755)||(41750276-41750341)
chr2 (913-972)||(4685144-4685203)
chr2 (864-955)||(39819605-39819703)
chr2 (669-747)||(1623078-1623156)
chr2 (867-972)||(6571602-6571711)
chr2 (823-955)||(25724896-25725033)
chr2 (842-940)||(3254142-3254245)
chr2 (842-906)||(13760857-13760923)
chr2 (772-972)||(37851677-37851882)
chr2 (773-886)||(7007405-7007518)
chr2 (772-976)||(13539488-13539696)
chr2 (673-742)||(41298186-41298255)
chr2 (924-968)||(1723279-1723323)
chr2 (842-971)||(1623273-1623405)
chr2 (772-883)||(13790110-13790221)
chr2 (671-721)||(25724753-25724803)
chr2 (706-755)||(4684945-4684994)
chr2 (923-972)||(4875750-4875799)
chr2 (665-755)||(14403463-14403555)
chr2 (924-972)||(24499418-24499464)
chr2 (665-742)||(25444922-25444999)
chr2 (924-969)||(45693103-45693148)
[»] scaffold0702 (1 HSPs)
scaffold0702 (664-967)||(3617-3915)
[»] scaffold0662 (1 HSPs)
scaffold0662 (664-967)||(4187-4487)
[»] chr7 (79 HSPs)
chr7 (664-955)||(45265112-45265398)
chr7 (666-955)||(35488253-35488537)
chr7 (664-972)||(9947037-9947341)
chr7 (664-972)||(11329714-11330017)
chr7 (665-755)||(44565767-44565857)
chr7 (669-972)||(45045352-45045650)
chr7 (664-972)||(43948966-43949269)
chr7 (665-976)||(5543174-5543479)
chr7 (664-754)||(33378555-33378645)
chr7 (773-972)||(41684069-41684272)
chr7 (665-972)||(48341086-48341386)
chr7 (666-754)||(27214115-27214203)
chr7 (669-963)||(30686048-30686336)
chr7 (842-972)||(25045664-25045798)
chr7 (664-755)||(25924896-25924987)
chr7 (667-754)||(34930727-34930814)
chr7 (669-963)||(37534159-37534447)
chr7 (842-972)||(44565935-44566069)
chr7 (842-953)||(25097959-25098074)
chr7 (666-754)||(48160833-48160921)
chr7 (842-972)||(27213902-27214036)
chr7 (664-755)||(27248014-27248105)
chr7 (664-755)||(28904445-28904536)
chr7 (842-972)||(45448832-45448966)
chr7 (666-743)||(45448665-45448742)
chr7 (842-972)||(25924684-25924818)
chr7 (842-952)||(9814281-9814395)
chr7 (842-972)||(16825401-16825535)
chr7 (773-972)||(22156226-22156430)
chr7 (773-972)||(22212141-22212345)
chr7 (842-972)||(27419271-27419405)
chr7 (842-972)||(40212779-40212913)
chr7 (664-755)||(48313843-48313934)
chr7 (842-955)||(11000592-11000709)
chr7 (842-955)||(27248183-27248300)
chr7 (671-755)||(18823890-18823974)
chr7 (671-755)||(39553910-39553994)
chr7 (664-755)||(17276418-17276509)
chr7 (842-972)||(38396413-38396547)
chr7 (842-972)||(39554073-39554207)
chr7 (864-966)||(45723061-45723167)
chr7 (842-955)||(8419653-8419770)
chr7 (842-967)||(18824036-18824164)
chr7 (664-755)||(31921983-31922076)
chr7 (665-754)||(38396626-38396714)
chr7 (667-755)||(27419483-27419571)
chr7 (842-972)||(34930513-34930648)
chr7 (844-966)||(6656525-6656650)
chr7 (842-972)||(38544084-38544218)
chr7 (842-972)||(41632411-41632545)
chr7 (664-755)||(41632623-41632709)
chr7 (842-972)||(48314012-48314146)
chr7 (923-972)||(10902697-10902746)
chr7 (664-745)||(45722880-45722961)
chr7 (773-955)||(43445947-43446133)
chr7 (772-963)||(45440727-45440922)
chr7 (664-717)||(16916182-16916235)
chr7 (670-755)||(44819981-44820066)
chr7 (842-972)||(28904233-28904367)
chr7 (842-972)||(33378724-33378866)
chr7 (670-747)||(38543920-38543998)
chr7 (669-754)||(31598449-31598534)
chr7 (844-955)||(6656288-6656402)
chr7 (666-753)||(6656731-6656819)
chr7 (842-935)||(31921811-31921908)
chr7 (671-755)||(25097796-25097881)
chr7 (924-972)||(48160638-48160686)
chr7 (704-755)||(8419848-8419899)
chr7 (672-755)||(22156437-22156520)
chr7 (672-755)||(22212352-22212435)
chr7 (665-708)||(40212626-40212669)
chr7 (667-754)||(40385887-40385974)
chr7 (842-952)||(44820144-44820258)
chr7 (924-971)||(47246114-47246161)
chr7 (923-972)||(30871163-30871212)
chr7 (924-976)||(31598653-31598705)
chr7 (668-754)||(45440637-45440720)
chr7 (666-755)||(43446140-43446229)
chr7 (842-910)||(48160685-48160754)
[»] chr5 (52 HSPs)
chr5 (681-966)||(35348579-35348858)
chr5 (665-959)||(29543075-29543364)
chr5 (664-972)||(6091436-6091739)
chr5 (668-972)||(11855702-11856001)
chr5 (665-972)||(18411931-18412233)
chr5 (665-972)||(4765607-4765909)
chr5 (665-972)||(12970577-12970879)
chr5 (664-955)||(22935976-22936262)
chr5 (773-972)||(20962411-20962614)
chr5 (668-972)||(27481082-27481381)
chr5 (842-972)||(8646438-8646572)
chr5 (842-972)||(19065552-19065686)
chr5 (665-755)||(8406616-8406706)
chr5 (491-596)||(1263023-1263123)
chr5 (664-972)||(17251535-17251836)
chr5 (667-755)||(555965-556053)
chr5 (663-972)||(32535657-32535961)
chr5 (842-972)||(36703764-36703898)
chr5 (669-755)||(19065764-19065850)
chr5 (665-755)||(26637280-26637370)
chr5 (665-972)||(14206868-14207170)
chr5 (664-955)||(28602277-28602562)
chr5 (842-972)||(27480900-27481033)
chr5 (669-976)||(31583106-31583404)
chr5 (842-972)||(555753-555887)
chr5 (842-972)||(8406784-8406918)
chr5 (842-972)||(42012226-42012360)
chr5 (668-972)||(1664456-1664754)
chr5 (669-755)||(8646649-8646735)
chr5 (669-739)||(20962286-20962356)
chr5 (323-428)||(1262858-1262960)
chr5 (665-754)||(28429450-28429539)
chr5 (664-754)||(6930363-6930453)
chr5 (665-952)||(43346962-43347243)
chr5 (667-755)||(36703506-36703594)
chr5 (772-959)||(40275815-40276006)
chr5 (842-965)||(6930531-6930657)
chr5 (671-754)||(16720946-16721029)
chr5 (913-972)||(28429666-28429725)
chr5 (924-976)||(3913243-3913295)
chr5 (669-754)||(36978393-36978478)
chr5 (668-753)||(42012445-42012530)
chr5 (924-972)||(26637090-26637138)
chr5 (666-754)||(27079220-27079308)
chr5 (667-755)||(27480735-27480823)
chr5 (664-754)||(35603034-35603123)
chr5 (924-977)||(16720254-16720307)
chr5 (924-972)||(36978218-36978266)
chr5 (924-971)||(19089765-19089812)
chr5 (669-751)||(19089933-19090016)
chr5 (664-694)||(7441577-7441607)
chr5 (913-950)||(35602892-35602929)
[»] chr8 (59 HSPs)
chr8 (666-955)||(38363804-38364088)
chr8 (664-972)||(37392593-37392896)
chr8 (668-972)||(41432464-41432764)
chr8 (664-955)||(35818488-35818774)
chr8 (665-976)||(16218986-16219290)
chr8 (842-972)||(3049899-3050033)
chr8 (664-972)||(38132784-38133088)
chr8 (665-959)||(15226688-15226975)
chr8 (776-972)||(29421536-29421736)
chr8 (667-755)||(18297836-18297924)
chr8 (667-953)||(19160807-19161088)
chr8 (842-972)||(1554401-1554535)
chr8 (664-747)||(12710366-12710449)
chr8 (842-972)||(25837801-25837935)
chr8 (668-755)||(42755592-42755679)
chr8 (842-955)||(16313571-16313688)
chr8 (842-955)||(18298002-18298119)
chr8 (664-972)||(26061865-26062168)
chr8 (665-754)||(32661194-32661283)
chr8 (664-963)||(43872022-43872315)
chr8 (842-972)||(12710535-12710669)
chr8 (664-755)||(16313766-16313857)
chr8 (664-755)||(25837632-25837723)
chr8 (665-755)||(3049731-3049821)
chr8 (665-755)||(26602196-26602286)
chr8 (665-972)||(7930961-7931263)
chr8 (670-755)||(10896475-10896560)
chr8 (667-972)||(18726666-18726967)
chr8 (842-972)||(32660980-32661115)
chr8 (842-972)||(26601985-26602118)
chr8 (667-884)||(37981925-37982134)
chr8 (842-944)||(6805698-6805804)
chr8 (773-971)||(21137180-21137382)
chr8 (668-755)||(5020750-5020837)
chr8 (664-755)||(33533651-33533742)
chr8 (842-972)||(42755757-42755891)
chr8 (665-755)||(25899381-25899471)
chr8 (667-755)||(33444881-33444969)
chr8 (842-972)||(7317265-7317397)
chr8 (664-755)||(40197312-40197403)
chr8 (842-951)||(41228782-41228894)
chr8 (666-755)||(31117785-31117874)
chr8 (862-958)||(25899543-25899642)
chr8 (677-755)||(1554613-1554692)
chr8 (867-976)||(38437369-38437482)
chr8 (849-972)||(33444673-33444798)
chr8 (913-969)||(35394355-35394411)
chr8 (842-972)||(10896264-10896397)
chr8 (842-954)||(5020558-5020674)
chr8 (664-721)||(35394079-35394136)
chr8 (701-751)||(6805889-6805939)
chr8 (668-754)||(21137391-21137476)
chr8 (894-972)||(14763978-14764058)
chr8 (665-755)||(34672083-34672175)
chr8 (667-718)||(12649859-12649910)
chr8 (864-969)||(31117580-31117689)
chr8 (667-752)||(37124073-37124157)
chr8 (708-754)||(35394156-35394202)
chr8 (666-700)||(41228983-41229017)
[»] scaffold0006 (5 HSPs)
scaffold0006 (672-972)||(143342-143637)
scaffold0006 (774-972)||(119143-119344)
scaffold0006 (842-972)||(201815-201949)
scaffold0006 (664-755)||(201647-201738)
scaffold0006 (671-742)||(119051-119122)
[»] chr6 (26 HSPs)
chr6 (667-972)||(16968649-16968949)
chr6 (664-972)||(18897642-18897945)
chr6 (665-755)||(2657422-2657512)
chr6 (665-955)||(1316741-1317025)
chr6 (845-970)||(6705814-6705943)
chr6 (665-747)||(8029025-8029107)
chr6 (665-755)||(10246375-10246465)
chr6 (772-972)||(345878-346084)
chr6 (842-955)||(2657590-2657707)
chr6 (668-755)||(14170740-14170827)
chr6 (665-754)||(7053838-7053927)
chr6 (668-976)||(14781663-14781955)
chr6 (842-972)||(7344130-7344264)
chr6 (842-972)||(14170905-14171037)
chr6 (664-755)||(6706011-6706102)
chr6 (671-755)||(21008238-21008322)
chr6 (681-755)||(7344753-7344827)
chr6 (667-755)||(9762299-9762387)
chr6 (667-727)||(11570071-11570131)
chr6 (842-972)||(7053617-7053759)
chr6 (842-914)||(8029193-8029267)
chr6 (672-755)||(8314623-8314706)
chr6 (924-954)||(8314889-8314919)
chr6 (922-964)||(9760425-9760467)
chr6 (931-972)||(8029316-8029357)
chr6 (894-972)||(21008071-21008151)
[»] scaffold0238 (1 HSPs)
scaffold0238 (842-971)||(23344-23477)
[»] scaffold0189 (2 HSPs)
scaffold0189 (842-972)||(28999-29133)
scaffold0189 (668-755)||(29211-29298)


Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-117; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 490 - 976
Target Start/End: Complemental strand, 17475833 - 17475364
Alignment:
Q  490 agcaatacaaccatattgattaacacaccggtttatttcgttgttgatttcaaagtcaataaatcaacattggctttaaactaccaagacaattgtaagg 589  Q
    ||||||||||||||||||||||| ||||  |||||| ||||||||| ||||||| ||||||||||||||||| ||| ||||| ||||||||| |||||||    
T  17475833 agcaatacaaccatattgattaatacactagtttatatcgttgttgttttcaaaatcaataaatcaacattgacttcaaactgccaagacaactgtaagg 17475734  T
Q  590 atccagctctgattaataataatgatgtgaattagagactttaaataaaggatgagataagattttagataataaagggtgtgtttgtttcaagtttatc 689  Q
    ||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  17475733 atccaactctgattaataataatggtgtgaattagagactccaaataaaggatgagataagattttatatagtaaagggtgtgttcgtttcaagtttatc 17475634  T
Q  690 aaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnnnnngatgtttgcttaacatta 789  Q
    |||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||                ||||||||||||||||||    
T  17475633 aaatttattcctaagaataacattctatggaaaataaaaatggaaattttattccaaggtatttag---------aaaaaaagatgtttgcttaacatta 17475543  T
Q  790 taatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttattcccacccttttcttggg 889  Q
    | |||||| ||||||| ||| ||||||            ||| |||||| |||||||| || |||||| |||| |||||||||||||| |||||||| ||    
T  17475542 tgatattcccgggaactataaaaatag------------gtatttacacaataatttactcccatctctattggaactttattcccactcttttctttgg 17475455  T
Q  890 aaaattt--tctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcgttt 976  Q
     ||||||  | ||||||||||||||  |||||| ||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  17475454 gaaattttatttattcccaggaacattttatacccgggaataaaatttagtaaacttataacaaacataaacatatatatttctatcgttt 17475364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 308 - 428
Target Start/End: Complemental strand, 17476015 - 17475895
Alignment:
Q  308 gtgcgtcacacacgagtggataccaacggtattttacaaacgaaagaaccaataggagcagcctcaaatcatccaatatcaaacaaaaacataaacataa 407  Q
    ||||||||| |||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17476015 gtgcgtcacgcacgggtggataccaacaatattttacaaacgaaagaaccaatcggagcagcctcaaatcatccaatatcaaacaaaaacataaacataa 17475916  T
Q  408 tgacaacattaaagaatgttc 428  Q
    |||||||||||||||||||||    
T  17475915 tgacaacattaaagaatgttc 17475895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 680 - 972
Target Start/End: Complemental strand, 52699799 - 52699513
Alignment:
Q  680 caagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnnnnngatgtttg 779  Q
    |||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||                 | |||||    
T  52699799 caagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggtatttagaaaaaat----------aagtttg 52699710  T
Q  780 cttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttattcccaccc 879  Q
    ||||||||||||||||||  |||||||||  |||||||||  |||||| | |||||| |   ||||||||| ||||||||| | ||||||||||||||||    
T  52699709 cttaacattataatattcctgggaaccatgaaaataggaattataataggaaattactcatgaatttattcccatctccatgggaactttattcccaccc 52699610  T
Q  880 ttttctt--gggaaaattttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||  || ||||| ||||||||||||||||   |||||| ||| ||||||||| |||||||||||||||||||||| ||||| |||| |||||    
T  52699609 ttttctttgggaaaaatgttctattcccaggaacgttttatacccgggaataaaattcagtaaacttgtaacaaacataggcatgtgtattcctatc 52699513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 5518852 - 5518551
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||| ||||||||| ||||||| ||||||||||| |  |||||||||||||||||| |||||||||| ||||||||||||||||||||||             
T  5518852 agggtctgtttgtttgaagtttaccaaatttattcattggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaat-- 5518755  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
            ||||| | ||||| |||||| ||||   ||||||||| ||||||| |  |||||| |||| || |    ||||||||||||||||||| | |    
T  5518754 --------atgttcggttaactttataacattcctaggaaccataaaaatagggattataataggtaactatatataaatttattctcatctccatggga 5518663  T
Q  865 actttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||||||||||  |||| ||| |||||||||||||||||||||||||||||||| |||     
T  5518662 actttattcccacctttttccttgggaaaatttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcata 5518563  T
Q  961 tatatttctatc 972  Q
    ||||||||||||    
T  5518562 tatatttctatc 5518551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 518 - 656
Target Start/End: Original strand, 38811189 - 38811330
Alignment:
Q  518 cggtttatttcgttgttgatttcaaagtcaataaatcaacattggctttaaactaccaagacaattgtaaggatc---cagctctgattaataataatga 614  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||   |||||||||||||||||||||     
T  38811189 cggtttatatcgttgttgatttcaaagtcaataaatcaacattgacttcaaattaccaagacaattgtaatgatccagcagctctgattaataataatgg 38811288  T
Q  615 tgtgaattagagactttaaataaaggatgagataagatttta 656  Q
    ||| |||||||||||  |||||||||||||||||||||||||    
T  38811289 tgtaaattagagactccaaataaaggatgagataagatttta 38811330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 672 - 972
Target Start/End: Original strand, 13653581 - 13653876
Alignment:
Q  672 gtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatg-gaaattttattccaaggtatttagnnnnnnnnnnnnnnn 770  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||| |||||||||| |                   
T  13653581 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtatttggaaaaaat-------- 13653672  T
Q  771 ngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaacttta 870  Q
      ||||||| ||||| |||||||||||   ||||||||| || |||| |  |||||| |||| ||||    ||||||||||||||||||| | |||||||    
T  13653673 --atgtttggttaactttataatattcctaggaaccataaaattagggattataataggtaactacatatgaatttattctcatctccatgggaacttta 13653770  T
Q  871 ttcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatt 966  Q
    |||||||| ||||||| || |||||||  |||||||||||||||||  |||  ||| |||||||||||||||||||||||||||| || |||| ||||||    
T  13653771 ttcccaccattttctttgggaaattttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacgtatacatatatatt 13653870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 666 - 955
Target Start/End: Complemental strand, 20260434 - 20260150
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||  ||||||              
T  20260434 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagaaatttaggaaaaat--- 20260338  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgta 864  Q
           ||||||||||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| | |    
T  20260337 -------atgtttgcttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggga 20260245  T
Q  865 actttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    |||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||    
T  20260244 actttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 20260150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 664 - 955
Target Start/End: Original strand, 46960350 - 46960635
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||| |||||||||  || ||||||||||| |||||||            
T  46960350 aagggtgtgtttgtttcaaatttatcaaatttattcctaggaataacattctttggaatataaagatgagaaatttattccaagatatttagaaaaaaa- 46960448  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgt 863  Q
            |||||||| |||||||||||||||||    ||||| || ||||||     |||||| ||||||||||   | |||||| |||||| ||| |     
T  46960449 --------gatgtttggttaacattataatattccaatgaaccttaaaaatagagtttataataggtaattacacacaattttatt-tcatcttcatggg 46960539  T
Q  864 aactttattcccacccttttc-ttgggaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||    
T  46960540 aactttattcccacccttttcattgggaaaacttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 46960635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 52630495 - 52630798
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||            
T  52630495 aagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat- 52630593  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| |||||||||  |||||| ||||       || ||||||||||||||||||| |    
T  52630594 ---------atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaactatttatgaatttattctcatctccatgg 52630684  T
Q  863 taactttattcccacccttttcttgggaaaa--ttttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     ||||||||||||||||||||||| |  |||  |||||||||||||||||||  |||||| ||  |||||||||||||||||||||||||||||||||||    
T  52630685 gaactttattcccacccttttctttgagaaattttttctattcccaggaacattttatacccgagaataaaatttagtaaacttgtaacaaacatagaca 52630784  T
Q  959 tgtatatttctatc 972  Q
    | || ||| |||||    
T  52630785 tatacattcctatc 52630798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 668 - 972
Target Start/End: Complemental strand, 48916368 - 48916069
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| ||| |||||||||  ||||||||||||||||||||||                
T  48916368 gtgtgtttgtttcaagtttatcaaatttattcttaggaataacattccttagaatataaagatgagaattttattccaaggtatttagaaaaaaat---- 48916273  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
         ||||||| ||||| |||||||||||   | ||||||| ||||||| |  |||||| | || ||||    ||||||||| ||||||||| | ||||    
T  48916272 -----atgtttggttaactttataatattcctagaaaccataaaaatagggattataataggcaactacatatgaatttattcccatctccatgggaact 48916178  T
Q  868 ttattcccacccttttcttgggaaaa--ttttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    ||||||||| |||| |||| || |||  ||||||||||||| |||||  |||||| || ||||||||||||||||||||||||||||||||| ||| ||     
T  48916177 ttattcccatccttatctttgggaaattttttctattcccatgaacattttatacccgaaaataaaatttagtaaacttgtaacaaacataggcatatac 48916078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 667 - 954
Target Start/End: Complemental strand, 37436966 - 37436686
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||| |||||               
T  37436966 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaatatggaaattttatttcaaggtgtttaggaaaaat---- 37436871  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaac 866  Q
          ||||||| ||||| |||||||||||   ||||||||| ||||| | |  ||||||  ||| ||      ||||||||||||||||||| | |||    
T  37436870 ------atgtttggttaactttataatattcttaggaaccataaaaataaggattataatagataactatttatgaatttattctcatctccatgggaac 37436777  T
Q  867 tttattcccacccttttc-ttgggaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacata 954  Q
    ||||||| |||||||||| ||||||||||||||||||| ||| ||||  |||||  || ||||||||||||||||||||||||||||||||    
T  37436776 tttattctcacccttttctttgggaaaattttctattctcagtaacattttatatccgaaaataaaatttagtaaacttgtaacaaacata 37436686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 665 - 955
Target Start/End: Original strand, 46666431 - 46666716
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  |||||||||| |||| ||||||             
T  46666431 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaat-- 46666528  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| |     
T  46666529 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 46666620  T
Q  864 aactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||    
T  46666621 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 46666716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 12190527 - 12190436
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  12190527 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaatataaagatgggaattttattccaaggaatttag 12190436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 664 - 955
Target Start/End: Original strand, 8331736 - 8332022
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| | ||||||            
T  8331736 aagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaagaatttaggaaaaat- 8331834  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||||||||||||| |    
T  8331835 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgg 8331925  T
Q  863 taactttattcccacccttttcttgggaa--aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     ||||||||||||||||||||| | | ||    |||||||||||||||||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  8331926 gaactttattcccacccttttccttgaaattttttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgcaacaaacatag 8332022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 664 - 959
Target Start/End: Original strand, 14788445 - 14788735
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||||||| ||||||||| ||||| ||||||            
T  14788445 aagggtgtgtttgttttaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggcaaaat- 14788543  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| |    
T  14788544 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 14788634  T
Q  863 taactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| |||| ||||||||||||||||||||||||||||||    
T  14788635 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaatataatttagtaaacttgtaacaaacatagaca 14788734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 665 - 976
Target Start/End: Complemental strand, 24116683 - 24116380
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||| |||||||||  ||||||||| |||||||| |||             
T  24116683 agggtgtgtttgttttaagtttaacaaatttattcttaagaataacattccttagaatataaagatgagaattttatttcaaggtatatag--------- 24116593  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
           |||||||||||||||||| ||||||   || ||||||| |||||||||  |||||| ||||||||||   ||| ||||||||||| ||| | |    
T  24116592 -aaaaaagatgtttgcttaacattaaaatatttttggaaaccataaaaataggaattataataggtaattacacataaatatattctcatcttcatggga 24116494  T
Q  865 actttattcccacccttttcttgggaaa--attttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
     |||||||||| |||||||||| || ||   |||| ||||  |||||||   |||||| ||| ||||||||||||||||||||| ||||||||| |||      
T  24116493 gctttattccctcccttttctttgggaattcttttttatttacaggaacgttttatacccgggaataaaatttagtaaacttgtgacaaacataaaca-- 24116396  T
Q  961 tatatttctatcgttt 976  Q
    ||||||||||||||||    
T  24116395 tatatttctatcgttt 24116380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 666 - 972
Target Start/End: Original strand, 9115561 - 9115862
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||              
T  9115561 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat--- 9115657  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgta 864  Q
           ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| | |    
T  9115658 -------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggga 9115750  T
Q  865 actttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| |||     
T  9115751 actttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcata 9115850  T
Q  961 tatatttctatc 972  Q
    || |||||||||    
T  9115851 tacatttctatc 9115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 666 - 972
Target Start/End: Original strand, 25789487 - 25789788
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||              
T  25789487 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat--- 25789583  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgta 864  Q
           ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| | |    
T  25789584 -------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggga 25789676  T
Q  865 actttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| |||     
T  25789677 actttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcata 25789776  T
Q  961 tatatttctatc 972  Q
    || |||||||||    
T  25789777 tacatttctatc 25789788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 5806625 - 5806535
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  5806625 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 5806535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 665 - 754
Target Start/End: Original strand, 6911208 - 6911297
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  6911208 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 6911297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 663 - 755
Target Start/End: Original strand, 25473976 - 25474068
Alignment:
Q  663 aaagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||| | ||||||    
T  25473976 aaagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaagaatttag 25474068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 668 - 972
Target Start/End: Complemental strand, 31807093 - 31806803
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||| ||||||||| |||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||| |||||||||||                
T  31807093 gtgtgtttatttcaagttgatcaaatttatttctaagaataatatttcttggaacataaagatgaaaattttattctaaggtatttagaaaaaat----- 31806999  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
         ||||||||||||||||||||||||  ||||||||||| ||||       ||||||  |||||||||   ||||| ||||||||| ||| | ||||    
T  31806998 -----atgtttgcttaacattataatatttgcgggaaccataaaaat------tataatagataattacacatgaatttgttctcatcttcatgggaact 31806910  T
Q  868 ttattcccacccttttcttgggaaa--attttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    ||||| |||||||||| || || ||   ||||||||||||||||||   ||||  |||  |||||||||||||||||  ||||||||||||  |||||||    
T  31806909 ttatttccacccttttatttgggaatttttttctattcccaggaacgttttatgttcgagaataaaatttagtaaac--gtaacaaacataagcatgtat 31806812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 669 - 955
Target Start/End: Complemental strand, 51445424 - 51445144
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnn 768  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||  ||||||||||||||| ||||||                 
T  51445424 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatatatagatgagaattttattccaaggaatttaggaaaaat------ 51445331  T
Q  769 nnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaact 867  Q
        ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||||||||||||| | ||||    
T  51445330 ----atgtttggttacctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaact 51445235  T
Q  868 ttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||  |||||||  | |||||| |||||||||||||||||||||||||    
T  51445234 ttattcccacccttttccttgggaaattttttctattcccaggaacattttatactaag-aataaattttagtaaacttgtaacaaacatag 51445144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 667 - 972
Target Start/End: Complemental strand, 1597689 - 1597389
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||||||||||| ||||||||||  || ||||||||||||||| || |||||||||| ||||||||||||||| ||||||               
T  1597689 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaat---- 1597594  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaa 865  Q
          ||||||| ||||| |||||||||||   ||||||||| ||||| | |  |||||| ||||       || ||||||||| ||||| ||| | ||    
T  1597593 ------atgtttggttaactttataatattcttaggaaccataaaaatatggattataataggtaaactatttatgaatttattcccatcttcatgggaa 1597500  T
Q  866 ctttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||||||  |||  ||| |||||||||||||||||||||||||||||||| ||| |    
T  1597499 ctttattcccaccctttttcttggaaaaatttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacataggcatat 1597400  T
Q  962 atatttctatc 972  Q
    | ||| |||||    
T  1597399 acattcctatc 1597389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 2430387 - 2430521
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  2430387 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 2430486  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  2430487 aacttgtaacaaacataggcatatacattcctatc 2430521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 668 - 754
Target Start/End: Complemental strand, 9832216 - 9832130
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  9832216 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattcctcggaatataaagatgggaattttattccaaggaattta 9832130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 36361506 - 36361596
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||| ||||||    
T  36361506 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaaatgggaattttattccaaggaatttag 36361596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 842 - 959
Target Start/End: Original strand, 39329499 - 39329620
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | |||||||||||||||||||| | ||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  39329499 aatttattcccatctccatgggaactttattcccaccctttttcatgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 39329598  T
Q  938 aacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||||    
T  39329599 aacttgtaacaaacatagacat 39329620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 47031582 - 47031672
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||    
T  47031582 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttag 47031672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 666 - 755
Target Start/End: Complemental strand, 38965027 - 38964938
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  38965027 gggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 38964938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 32824812 - 32824930
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc--ttgggaaaatttt-ctattcccaggaaca--ttatactcggaaataaaatttagt 936  Q
    ||||||||| ||||| ||| | |||||||||||||||||||||  |||||||| |||| |||||||||||||||  |||||| |||||||||||||||||    
T  32824812 aatttattcccatcttcatgggaactttattcccacccttttcctttgggaaattttttctattcccaggaacaatttatacccggaaataaaatttagt 32824911  T
Q  937 aaacttgtaacaaacatag 955  Q
    |||||||||||||||||||    
T  32824912 aaacttgtaacaaacatag 32824930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 666 - 754
Target Start/End: Original strand, 39930181 - 39930269
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  39930181 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgggaattttattccaaggaattta 39930269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 3572746 - 3572612
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||| ||    
T  3572746 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaata 3572647  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  3572646 aacttgtaacaaacataggcatatacattcctatc 3572612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 9832051 - 9831917
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||| |||||||||||||||||  ||||   | |||||| |||||||    
T  9832051 aatttattcccatctccatgggaactttattcccacccttttccttgggaaaatttttctattcccaggaacattttataccaaggaataaattttagta 9831952  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  9831951 aacttgtaacaaacataggcatatacatttctatc 9831917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 12190358 - 12190224
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||| ||| | ||||||||||||||| ||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  12190358 aatttattcccatcttcatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 12190259  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| |||||| ||| |||||    
T  12190258 aacttgtaacaaacataggcatgtacattcctatc 12190224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 843 - 972
Target Start/End: Original strand, 13521213 - 13521346
Alignment:
Q  843 atttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    ||||||||||||||   | | ||||||||| ||||||||||||| || |||||||  ||||||||| |||||||  |||||||  |||||||||||||||    
T  13521213 atttattctcatctttctggaaactttatttccacccttttctttgggaaattttttctattcccaagaacattttatactcgtgaataaaatttagtaa 13521312  T
Q  939 acttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||| |||||||||||||||||||    
T  13521313 acttgtaacaaacacagacatgtatatttctatc 13521346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 843 - 972
Target Start/End: Complemental strand, 19083285 - 19083152
Alignment:
Q  843 atttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    |||||||||||| | | | | ||||||||| ||||||||||||| || |||||||  ||||| |||||||||||  |||||||  |||||||||||||||    
T  19083285 atttattctcatatgcctggaaactttatttccacccttttctttgggaaattttttctatttccaggaacattttatactcgtgaataaaatttagtaa 19083186  T
Q  939 acttgtaacaaacatagacatgtatatttctatc 972  Q
    |||| |||||||||||||||||||||||||||||    
T  19083185 acttataacaaacatagacatgtatatttctatc 19083152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 843 - 972
Target Start/End: Complemental strand, 19131173 - 19131040
Alignment:
Q  843 atttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    |||||||||||| | | | | ||||||||| ||||||||||||| || |||||||  ||||| |||||||||||  |||||||  |||||||||||||||    
T  19131173 atttattctcatatgcctggaaactttatttccacccttttctttgggaaattttttctatttccaggaacattttatactcgtgaataaaatttagtaa 19131074  T
Q  939 acttgtaacaaacatagacatgtatatttctatc 972  Q
    |||| |||||||||||||||||||||||||||||    
T  19131073 acttataacaaacatagacatgtatatttctatc 19131040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 47037348 - 47037482
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  47037348 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 47037447  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| ||||||||||||    
T  47037448 aacttgtaacaaacataggcatatatatttctatc 47037482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 665 - 754
Target Start/End: Original strand, 29091395 - 29091484
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||  || |||||||||| |||||||||||||||||||||    
T  29091395 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttaaaatataaagatgggaattttattccaaggtattta 29091484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 665 - 754
Target Start/End: Original strand, 32824644 - 32824733
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||| ||||  ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  32824644 agggtgtgtttgtttcaaatttacgaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 32824733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 669 - 972
Target Start/End: Complemental strand, 4683718 - 4683421
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnn 768  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||  |||||| |||||||||| ||||||||||||||| ||||||                 
T  4683718 tgtgattgtttcaagtttatcaaatttatttctaagaataacattttttggaatataaagatgggaattttattccaaggaatttaggaaaaat------ 4683625  T
Q  769 nnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgtaact 867  Q
        ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| | ||||    
T  4683624 ----atgtttggttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattcacatctccatgggaact 4683529  T
Q  868 ttattcccacccttttcttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtata 964  Q
    |||||||| || |||| ||||||||  ||||||||||| |||||||  |||||  ||| |||||||||||||||| ||||||||||||||| ||| || |    
T  4683528 ttattccccccttttttttgggaaattttttctattcctaggaacattttatatccgggaataaaatttagtaaatttgtaacaaacataggcatataca 4683429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 39930348 - 39930482
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| | ||||| ||||  |||||||||||||||||  ||||   | |||||| |||||||    
T  39930348 aatttattctcatctccatggaaactttattcccacccttttccttggaaatttttttctattcccaggaacattttataccaaggaataaattttagta 39930447  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  39930448 aacttgtaacaaacataggcatatacatttctatc 39930482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 668 - 755
Target Start/End: Original strand, 2430223 - 2430310
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||| ||||||    
T  2430223 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttattccaaggaatttag 2430310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 9011511 - 9011208
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||| ||||||||||||||||||  || |||||| |||||| |||||||||||||| ||||||| ||| || ||||||||             
T  9011511 agggtgtgtttgttttaagtttatcaaatttatttttaggaataatattcctcggaacataaagatgaaaattttcttctaaagtatttagaaaaaaaaa 9011412  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
            |||||||||||||||||||||||||  ||  |||||| ||||| |||  |||||| | |||||| |   ||||||||| || | | || | |    
T  9011411 a-------atgtttgcttaacattataatattcctggagaccata-aaataagaattataataggaaattactcatgaatttattcccaccactatggga 9011320  T
Q  865 actttattcccacccttttctt--gggaaaattttctattcccaggaa---cattatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||| |||||||||||  || ||||||||| |||| || |||     |||||| || |||||||||||||||||||||||| ||||||||||||    
T  9011319 actttattccgacccttttctttgggaaaaattttcgattctcacgaaaccttttatac-cgaaaataaaatttagtaaacttgtaataaacatagacat 9011221  T
Q  960 gtatatttctatc 972  Q
    ||||||| |||||    
T  9011220 gtatattcctatc 9011208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 45771815 - 45771905
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||| || |||||||||||||| ||  ||||||||||||||||||||||    
T  45771815 agggtgtgtttgtttcaagtttaccaaatttattcccatgaataacctttcttggaacataaaggtgagaattttattccaaggtatttag 45771905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 667 - 747
Target Start/End: Complemental strand, 32202660 - 32202580
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaag 747  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||  ||||||||||||||    
T  32202660 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaag 32202580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 13440285 - 13440420
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaa---aattttctattcccaggaaca--ttatactcggaaataaaatttagt 936  Q
    ||||||||||||||| ||| | ||||||||| ||||||||||||| ||||     |||||||||| ||||||||  |||||||||  |||||||||||||    
T  13440285 aatttattctcatcttcatggaaactttatttccacccttttctttggaatttttttttctattctcaggaacattttatactcgtgaataaaatttagt 13440384  T
Q  937 aaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||| || |||||||||||| ||| ||||||||||||    
T  13440385 aaaattctaacaaacatagtcatttatatttctatc 13440420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 802 - 972
Target Start/End: Complemental strand, 20505213 - 20505036
Alignment:
Q  802 gaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttattcccacccttttcttgggaaaattttct-- 899  Q
    |||||||| ||||||| |  |||||||||| ||||||   |||||||| |||||| ||| | | |||||||  |||| ||||||| || || |||| |      
T  20505213 gaaccataaaaatagggattataatatgtagttacacatgaatttattttcatcttcatggaagctttattttcacctttttctttggtaattttttttt 20505114  T
Q  900 ---attcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
       ||||||||||| |||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20505113 cttattcccaggaatattttatactcgtgaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 20505036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 36361674 - 36361807
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    |||||| |||||||||||| | |||||||||||| || ||| ||||||||| |||| ||||||| |||||||||  ||||  || |||||||||||||||    
T  36361674 aatttactctcatctccatgggaactttattccccccttttccttgggaaattttttctattcctaggaacattttatacctgggaataaaatttagtaa 36361773  T
Q  939 acttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||| ||| || ||| |||||    
T  36361774 acttgtaacaaacataggcatatacattcctatc 36361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 50191113 - 50191023
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||  ||||||||| | ||| ||||||    
T  50191113 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttatttcgaggaatttag 50191023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 11014622 - 11014488
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||| |||   ||||||||| |||||||||||||  |||| ||||  |||||||||| ||||||  |||  ||  |||| |||||| ||    
T  11014622 aatttattctcatcttcatgagaactttatttccacccttttcttttgaaatttttttctattcccagaaacattttatatccgtgaatataatttatta 11014523  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||||||||||||    
T  11014522 aacttgtaacaaacatagacatgtatatttctatc 11014488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 668 - 752
Target Start/End: Complemental strand, 13932218 - 13932134
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatt 752  Q
    ||||||||||||||||||||||||||||||| | | ||||||||||| ||| || ||||||||||||| |||||| |||||||||    
T  13932218 gtgtgtttgtttcaagtttatcaaatttatttcaaggaataacattcattgaaatataaagatggaaactttatttcaaggtatt 13932134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 38811006 - 38811104
Alignment:
Q  326 gataccaacggtattttacaaacgaaagaaccaataggagcagcctcaaatcatccaatatcaaacaaaaacataaacataatgacaacattaaagaatg 425  Q
    ||||||||| |||||||||||| | ||||| ||| | ||||   ||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  38811006 gataccaacagtattttacaaatgtaagaatcaacatgagc---ctcaaat-attcaatatcaaacaaaaacataaacataatgacaacattaaagaatg 38811101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 666 - 952
Target Start/End: Original strand, 47677368 - 47677648
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    |||||||||| ||| |||||||| |||||||||| || |||||| ||| ||||||| |||||||||  |||||||||||||| ||||||               
T  47677368 gggtgtgtttatttaaagtttatgaaatttattcttaggaataaaatttcttggaatataaagatgagaattttattccaagatatttaaaaaaaat--- 47677464  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataa-tttattctcatctccattgta 864  Q
           ||||||| ||||| || ||||||||   |||||| || ||||||| |  ||||||||||||||||| |||| ||||||| ||||| ||| | |    
T  47677465 -------atgtttggttaactttgtaatattctaaggaaccttaaaaatagggattataatatgtaattacac-ataattttattcccatcttcatggga 47677556  T
Q  865 actttattcccacccttttc-ttgggaaaa-ttttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaaca 952  Q
    |||||||||||| ||||| | ||||||||| ||||||||||   ||||||  |||||| |||||||||||||||||||| || |||||||||    
T  47677557 actttattcccatcctttcctttgggaaaacttttctattcaatggaacattttatacccggaaataaaatttagtaaatttataacaaaca 47677648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 6978661 - 6978795
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacattatactcgga--aataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| ||| |||| |||| |||||||| | |||||| ||  || |  |||||| |||||||    
T  6978661 aatttattctcatctccatggaaactttattcccacccttttccttgagaaattttttctattccctgaaacattttatacgaaggaataaattttagta 6978760  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  6978761 aacttgtaacaaacataggcatatacatttctatc 6978795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 2632744 - 2632860
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||| ||| ||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||| ||    
T  2632744 aatttattcacatctccatgggaactttattcc-accattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaata 2632842  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  2632843 aacttgtaacaaacatag 2632860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 669 - 755
Target Start/End: Complemental strand, 38519405 - 38519319
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||| |||| ||||||||||| || ||||||||||  |||||||||||| ||| |||||||||||||| ||||||||    
T  38519405 tgtgtttgtttcaaatttaccaaatttattcgtaggaataacattttttggaacataaaaatgaaaattttattccaatgtatttag 38519319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 867 - 966
Target Start/End: Original strand, 1007663 - 1007766
Alignment:
Q  867 tttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    ||||||| ||||||||| ||||| |||||||| |||||||||||||||||  |||  ||| |||||||||||||||||||||||||||| ||||||| ||    
T  1007663 tttattctcaccctttttcttggtaaaatttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacctagacatata 1007762  T
Q  963 tatt 966  Q
    ||||    
T  1007763 tatt 1007766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 972
Target Start/End: Original strand, 29091569 - 29091691
Alignment:
Q  854 tctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacattat--actcggaaataaaatttagtaaacttgtaacaa 949  Q
    ||||||| | ||||||||||||||| |||| || || |||||||  ||||||| | ||||||| |  |||||  ||||||||||||||||||||||||||    
T  29091569 tctccatgggaactttattcccacctttttttttgggaaattttttctattccgatgaacattttttactcgagaataaaatttagtaaacttgtaacaa 29091668  T
Q  950 acatagacatgtatatttctatc 972  Q
    |||||||||| ||||||| ||||    
T  29091669 acatagacatatatatttttatc 29091691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 845 - 972
Target Start/End: Original strand, 35187350 - 35187481
Alignment:
Q  845 ttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaac 940  Q
    ||||||| |||||||| | |||||||||||||||||| || |||||||| |||| ||||||||| |||||||  ||||   | |||||| ||||||||||    
T  35187350 ttattcttatctccatgggaactttattcccacccttctccttgggaaattttttctattcccacgaacattttataccaaggaataaattttagtaaac 35187449  T
Q  941 ttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||| |||| || |||||||||    
T  35187450 ttgtaacaaacataaacatatacatttctatc 35187481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 668 - 755
Target Start/End: Complemental strand, 1228225 - 1228138
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||| ||||||| |||||||||| ||| ||||||| |||||||||| |||||||||  ||||||||||||| | ||||||    
T  1228225 gtgtgtttgttttaagtttaccaaatttatttctatgaataaccttccttggaatataaagatgagaattttattccaaagaatttag 1228138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 773 - 972
Target Start/End: Original strand, 30240832 - 30241034
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||| |||||||||||    |||||||| || |||| |  |||||| |||||||||    ||||||||||||||| |||   |||||||||    
T  30240832 atgtttggttaactttataatattcctaagaaccataaaagtagggattataataggtaattacatataaatttattctcatcttcatgagaactttatt 30240931  T
Q  873 cccacccttttcttgggaaaatttt--ctattcccaggaacattatactc-ggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttct 969  Q
    | ||| |||||||| || || ||||  |||||||||  ||| || || || || ||||||||||| |||||||||||||||||||| ||| |||||||||    
T  30240932 ctcactcttttctttgggaatttttttctattcccaataactttttattccgggaataaaatttaataaacttgtaacaaacataggcatatatatttct 30241031  T
Q  970 atc 972  Q
    |||    
T  30241032 atc 30241034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 38964860 - 38964726
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttt-tcttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    |||||||||  |||||||| | ||||||||||||||||||| |||||||||| |||| |||||||||||||||||  ||||   | |||||| ||| |||    
T  38964860 aatttattccaatctccatgggaactttattcccaccctttctcttgggaaattttttctattcccaggaacattttataccaaggaataaatttttgta 38964761  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||  ||| || |||||||||    
T  38964760 aacttgtaacaaacataagcatatacatttctatc 38964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 867 - 955
Target Start/End: Complemental strand, 13932039 - 13931948
Alignment:
Q  867 tttattcccacccttttctt--gggaaaattttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    ||||||||||||||||||||  || |||  |||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  13932039 tttattcccacccttttctttaggaaaacatttctattcc-aggaacattttatacccggaaataaaatttagtaaacttgtaacaaacatag 13931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 667 - 721
Target Start/End: Original strand, 39329347 - 39329401
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaa 721  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  39329347 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaa 39329401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 664 - 742
Target Start/End: Original strand, 49627296 - 49627374
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttatt 742  Q
    |||| |||||||||||||| |||| ||||||||||  ||||||||||||| ||||||| |||||||||| |||||||||    
T  49627296 aaggatgtgtttgtttcaaatttaccaaatttatttttaagaataacatttcttggaatataaagatgggaattttatt 49627374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 842 - 951
Target Start/End: Complemental strand, 50190945 - 50190833
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||| ||| | ||||||||||||||| ||||| |||||||| |||| ||||||| |||||||||  |||| ||| ||||||||||||||    
T  50190945 aatttattc-catcttcatgggaactttattcccacctttttccttgggaaattttttctattccaaggaacattttatacccgggaataaaatttagta 50190847  T
Q  938 aacttgtaacaaac 951  Q
    ||||||||||||||    
T  50190846 aacttgtaacaaac 50190833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 665 - 745
Target Start/End: Original strand, 2632576 - 2632656
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattcca 745  Q
    ||||||| |||||||||||||||  ||||||||| ||| |||||||||||||| ||| ||||| |||| ||||||||||||    
T  2632576 agggtgtatttgtttcaagtttactaaatttatttctaggaataacattccttagaatataaatatgggaattttattcca 2632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 895 - 972
Target Start/End: Complemental strand, 52186172 - 52186093
Alignment:
Q  895 tttctattcccaggaacattatac--tcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||| |||||| ||   |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  52186172 tttctattcccagaaacattttatcgtcgggaataaaatttagtaaacttgtaacaaatatagacatatatatttctatc 52186093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 49824067 - 49824022
Alignment:
Q  670 gtgtttgtttcaagtttatcaaatttattcctaagaataacattcc 715  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  49824067 gtgtttgtttcaagtttatcaaatttattcctaggaataacattcc 49824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 667 - 755
Target Start/End: Complemental strand, 19923810 - 19923722
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||| ||||| ||||||||||||  ||  ||||||||| ||| |||||||||||||  |||||||||| ||| |||||||    
T  19923810 ggtgtgtttgttttaagttcatcaaatttatttttagaaataacatttcttagaacataaagatgagaattttattctaagatatttag 19923722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 668 - 743
Target Start/End: Original strand, 35187181 - 35187257
Alignment:
Q  668 gtgtgtttgtttcaa-gtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattc 743  Q
    ||||||||||||||| ||||| ||||||||||| || |||||| ||| |||| || |||||||||||||||||||||    
T  35187181 gtgtgtttgtttcaaagtttaccaaatttattcttaggaataatatttcttgaaatataaagatggaaattttattc 35187257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 822 - 959
Target Start/End: Original strand, 29769382 - 29769524
Alignment:
Q  822 ataatatgtaattacacgataatttattctcatctccattgtaactttattcccaccctttt--cttgggaaaatt-ttctattcccaggaacattata- 917  Q
    |||||| ||||||||||   |||||||| |||||| ||| | ||||||||||||||||||||   || |||||||| ||||||| ||||||||||| ||     
T  29769382 ataataggtaattacacatgaatttattttcatcttcatggaaactttattcccaccctttttctttaggaaaattgttctattgccaggaacattttat 29769481  T
Q  918 ctcgga-aataaaatttagtaaacttgtaacaaacatagacat 959  Q
     ||  | |||||||||||||||  |||||||||||||||||||    
T  29769482 gtcaaagaataaaatttagtaattttgtaacaaacatagacat 29769524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 664 - 743
Target Start/End: Original strand, 37261541 - 37261620
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattc 743  Q
    |||| ||||||||||||||||||||||||||||||  || || |||||||| |||||| ||||| |||  ||||||||||    
T  37261541 aaggatgtgtttgtttcaagtttatcaaatttatttttatgattaacattcattggaatataaatatgtgaattttattc 37261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 667 - 746
Target Start/End: Complemental strand, 52186344 - 52186265
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaa 746  Q
    ||||| ||||||| ||||||| ||||||||||   | |||||||||||||||||| |||||||||  |||||||||||||    
T  52186344 ggtgtatttgttttaagtttaccaaatttattttaaggaataacattccttggaatataaagatgagaattttattccaa 52186265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 6911376 - 6911501
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca----------ttatactcggaaataaa 929  Q
    ||||||||| |||||| || | ||||||||||||||| |||| |||||||||  |||||||||||||||||||          |||||| | | ||||||    
T  6911376 aatttattcccatctctatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatacccaggaataaa 6911475  T
Q  930 atttagtaaacttgtaacaaacatag 955  Q
    ||||||||||||||||||||||||||    
T  6911476 atttagtaaacttgtaacaaacatag 6911501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 665 - 719
Target Start/End: Original strand, 37726805 - 37726859
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttgg 719  Q
    ||||||||||||||||||||| |  ||||||||||||| ||||||||||||||||    
T  37726805 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 37726859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 922 - 968
Target Start/End: Original strand, 37726999 - 37727045
Alignment:
Q  922 gaaataaaatttagtaaacttgtaacaaacatagacatgtatatttc 968  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||    
T  37726999 gaaataaaatttagaaaacttgtaacaaacatagatatgtatatttc 37727045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 45813727 - 45813653
Alignment:
Q  681 aagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||| || ||||||||||| ||| || |||||||||  |||||||||  |||||||||||    
T  45813727 aagtttatcaaatttattcttaggaataacattcattgaaatataaagatgtgaattttattttaaggtatttag 45813653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 924 - 972
Target Start/End: Original strand, 3939517 - 3939565
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  3939517 aataaaatttagcaaacttgtaacaaacataagcatgtatatttctatc 3939565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 919 - 971
Target Start/End: Original strand, 37261819 - 37261871
Alignment:
Q  919 tcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctat 971  Q
    |||| ||||||||||| |||||||||||||||||||  |||||||||||||||    
T  37261819 tcgggaataaaatttaataaacttgtaacaaacatatgcatgtatatttctat 37261871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 666 - 700
Target Start/End: Original strand, 1007539 - 1007573
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcc 700  Q
    |||||||||||||||||||||||||||||||||||    
T  1007539 gggtgtgtttgtttcaagtttatcaaatttattcc 1007573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 842 - 906
Target Start/End: Complemental strand, 32202494 - 32202428
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattccca 906  Q
    ||||||||| ||||||||| | |||||||||||||||||||| |||||||||  |||||||||||||    
T  32202494 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattccca 32202428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 668 - 746
Target Start/End: Original strand, 48462258 - 48462336
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaa 746  Q
    |||| ||||||| ||||||||||||||||||  || ||||||||||| |||||  |||||||||  |||| ||||||||    
T  48462258 gtgtatttgttttaagtttatcaaatttatttttatgaataacattctttggagtataaagatgagaattatattccaa 48462336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 924 - 970
Target Start/End: Original strand, 52276895 - 52276941
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttcta 970  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||    
T  52276895 aataaaatttagtaaacttgtaacaaatataggcatggatatttcta 52276941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 666 - 727
Target Start/End: Original strand, 3939225 - 3939286
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaa 727  Q
    |||||||||||||| ||||||||||||| ||||  || ||||||||||| |||||| |||||    
T  3939225 gggtgtgtttgttttaagtttatcaaatatatttttaggaataacattctttggaatataaa 3939286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 772 - 971
Target Start/End: Complemental strand, 38519312 - 38519110
Alignment:
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaatt-acacgataatttattctcatctccattgtaacttta 870  Q
    |||||||| |||||||||||||||||  || ||||||| ||||||| |  |||||| |||||| | ||   ||||| | || || || || | |||||||    
T  38519312 gatgtttgtttaacattataatattcttggaaaccataaaaatagggattataataggtaatttatacatgaatttttcctaatttc-atgggaacttta 38519214  T
Q  871 ttcccac-ccttttctt-gggaaaattttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatt 966  Q
    ||||||  ||||||||| ||||||||||| | ||||||  ||||||  ||||  || |||||||||||||||||||||||||||||||  ||| | ||||    
T  38519213 ttcccaaaccttttctttgggaaaatttt-tcttcccaaaaacattttatacctgggaataaaatttagtaaacttgtaacaaacataagcatctgtatt 38519115  T
Q  967 tctat 971  Q
    |||||    
T  38519114 tctat 38519110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 927 - 972
Target Start/End: Complemental strand, 49823009 - 49822964
Alignment:
Q  927 aaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||    
T  49823009 aaaatttagtaaacttgtaacaaacataggcatatacatttctatc 49822964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 842 - 897
Target Start/End: Complemental strand, 49823077 - 49823021
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt 897  Q
    |||||||| |||||||||| | |||||||||||||||||||| ||||||||| ||||    
T  49823077 aatttattatcatctccatgggaactttattcccacccttttccttgggaaattttt 49823021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 707 - 755
Target Start/End: Complemental strand, 49823203 - 49823155
Alignment:
Q  707 taacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||| |||||||||| |||||||||||| || ||||||    
T  49823203 taacattccttggaatataaagatgggaattttattccatggaatttag 49823155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 922 - 976
Target Start/End: Original strand, 45772056 - 45772110
Alignment:
Q  922 gaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcgttt 976  Q
    ||||||||||||| ||||||| ||||||||||| | ||| |||||| ||||||||    
T  45772056 gaaataaaatttaataaacttataacaaacataaatatgcatatttatatcgttt 45772110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 664 - 697
Target Start/End: Original strand, 6978519 - 6978552
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttat 697  Q
    |||||||||||||||||||||||| |||||||||    
T  6978519 aagggtgtgtttgtttcaagtttaccaaatttat 6978552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 1e-68; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 489 - 665
Target Start/End: Original strand, 55875202 - 55875378
Alignment:
Q  489 gagcaatacaaccatattgattaacacaccggtttatttcgttgttgatttcaaagtcaataaatcaacattggctttaaactaccaagacaattgtaag 588  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  55875202 gagcaatacaaccatattgattaacacactggtttatatcgttattgatttcaaagtcaataaatcaacattggcttcaaactaccaagacaattgtaac 55875301  T
Q  589 gatccagctctgattaataataatgatgtgaattagagactttaaataaaggatgagataagattttagataataaa 665  Q
    ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||| ||||    
T  55875302 gatccagatctgattaataataatggtgtgaattagagactctaaataaaggatgatataagattttatatagtaaa 55875378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 13230338 - 13230036
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||             
T  13230338 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat-- 13230241  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| |     
T  13230240 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 13230149  T
Q  864 aactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| |||||||||||||||||||||||||||||||| |||    
T  13230148 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcat 13230049  T
Q  960 gtatatttctatc 972  Q
     || |||||||||    
T  13230048 atacatttctatc 13230036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 666 - 966
Target Start/End: Original strand, 7258691 - 7258985
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| |||| ||||||||||||||||||||                
T  7258691 gggtgtgtttgtttcaagtttatcaaatttattctcaggaataacattccttggaatataaatatgggaattttattccaaggtattt----------ga 7258780  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaa 865  Q
          |||||||| |||||||| ||||||||   ||||||||| ||||  | || |||||| ||| |||||    ||||||||| ||| | ||| | ||    
T  7258781 ataaaagatgtttggttaacattttaatattccaaggaaccataaaaattaggactataataagtagttacaaatgaatttattcccatattcatgggaa 7258880  T
Q  866 ctttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    |||||||||||| ||||||||  | |||||||  |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  7258881 ctttattcccactcttttcttttggaaattttttctattcccaggaacattttatacgcggaaataaaatttagtaaacttgtaacaaacaaagacatgt 7258980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 667 - 955
Target Start/End: Complemental strand, 27763246 - 27762963
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||| ||||||               
T  27763246 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagataggaattttattccaaggaatttaggaaaaat---- 27763151  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaa 865  Q
          ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| | ||    
T  27763150 ------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaa 27763057  T
Q  866 ctttattcccacccttttc-ttgggaaa-attttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||    
T  27763056 ctttattcccacccttttccttgggaaatattttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 27762963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 39730642 - 39730340
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||             
T  39730642 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat-- 39730545  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||||| |||||||||||   ||||||||  ||||||| |  |||||| || || ||      ||||||||| |||||||||       
T  39730544 --------atgtttggttaactttataatattcctaggaaccatgaaaatagggattataataggtaaactatttatgaatttattcccatctccatgtg 39730453  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  39730452 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacat 39730353  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  39730352 atacattcctatc 39730340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 664 - 959
Target Start/End: Complemental strand, 55968350 - 55968060
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  55968350 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaat- 55968252  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  55968251 ---------atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 55968161  T
Q  863 taactttattcccaccc-ttttcttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||| ||||| |||||||  |||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||| |||||    
T  55968160 gaactttattcccaccctttttcatgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacagagaca 55968061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 25932166 - 25932469
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||||| || |||||||||| ||||||||||||||| ||||||            
T  25932166 aagggtgtgtttgtttcaagtttcccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaat- 25932264  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  25932265 ---------atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 25932355  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| ||    
T  25932356 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggca 25932455  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  25932456 tatacatttctatc 25932469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 35999412 - 35999714
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||             
T  35999412 agggtttgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat-- 35999509  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |     
T  35999510 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 35999601  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| |||    
T  35999602 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcat 35999701  T
Q  960 gtatatttctatc 972  Q
     || |||||||||    
T  35999702 atacatttctatc 35999714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 664 - 955
Target Start/End: Complemental strand, 41859396 - 41859111
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||| ||||| ||||||            
T  41859396 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatttcaaggaatttaggaaaaat- 41859298  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  41859297 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 41859207  T
Q  863 taactttattcccaccctttt-cttgggaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||  || ||||||||  ||||||||||||||||||||||    
T  41859206 gaactttattcccacccttttccttgggaaatttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacatag 41859111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 43722989 - 43723292
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||| | ||||||            
T  43722989 aagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaagaatttaggaaaaat- 43723087  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||||||||||||| |    
T  43723088 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgg 43723178  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||| ||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| ||    
T  43723179 gaactttattctcacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggca 43723278  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  43723279 tatacatttctatc 43723292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 45595993 - 45596296
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  45595993 aagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat- 45596091  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||| ||||| |    
T  45596092 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatttccatgg 45596182  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| ||    
T  45596183 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggca 45596282  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  45596283 tatacatttctatc 45596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 672 - 972
Target Start/End: Complemental strand, 48519233 - 48518938
Alignment:
Q  672 gtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnnnnn 771  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||                    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgtgaattttattccaaggaatttaggaaaaat--------- 48519143  T
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaacttta 870  Q
     ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| | |||||||    
T  48519142 -atgtttggttagctttataatattcctaggaaccataaaaataggtattataataggtaaactatttatgaatttattcccatctccatgggaacttta 48519044  T
Q  871 ttcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatt 966  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||  ||||  || |||||||||||||||||||||||||||||||| ||| || |||    
T  48519043 ttcccacccttttccttgggaaattttttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatatacatt 48518944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 51968505 - 51968805
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| | || ||||||||  |||||||||||||||||| |||             
T  51968505 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttcgtacgtaaagatgagaattttattccaaggtatatag--------- 51968595  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
           |||||||| ||||||||||||||||   | |||||||| ||||| | |  |||  |||||||||||    || |||||  ||||| ||| | |    
T  51968596 -aaaaaagatgtttgtttaacattataatatttctgagaaccataaaaataaggattata--atgtaattacatatgaaattatttccatcttcatggga 51968692  T
Q  865 actttattcccaccctttt--cttgggaaa-attttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||   |||||||| |||||||||||||||||||   ||||||||   |||||||||||| ||||||||||||||||||| |||    
T  51968693 actttattcccaccctttttctttgggaaacattttctattcccaggaacgttttatactcaagaataaaatttagcaaacttgtaacaaacataggcat 51968792  T
Q  960 gtatatttctatc 972  Q
    | |||||||||||    
T  51968793 gcatatttctatc 51968805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 667 - 972
Target Start/End: Complemental strand, 41744568 - 41744267
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||| |||||||||  ||||||||||||||| ||||||               
T  41744568 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattcattggaatataaagatgagaattttattccaaggaatttaggaaaaat---- 41744473  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaa 865  Q
          ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||    |  || ||||||||||||||||||| | ||    
T  41744472 ------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactaattatgaatttattctcatctccataggaa 41744379  T
Q  866 ctttattcccaccctttt-cttgggaaa-attttctattcccaggaacattata---ctcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| ||   |   |||||||| ||||||||||||||||||||||||| |||     
T  41744378 ctttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaagaaataaattttagtaaacttgtaacaaacataggcata 41744279  T
Q  961 tatatttctatc 972  Q
    || |||||||||    
T  41744278 tacatttctatc 41744267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 48879051 - 48879353
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||||| || |||             
T  48879051 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgtaggaaaaat-- 48879148  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |     
T  48879149 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 48879240  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| |||    
T  48879241 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcat 48879340  T
Q  960 gtatatttctatc 972  Q
     || |||||||||    
T  48879341 atacatttctatc 48879353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 47670087 - 47670178
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  47670087 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 47670178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 45748144 - 45748054
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  45748144 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 45748054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 659 - 971
Target Start/End: Complemental strand, 18405588 - 18405282
Alignment:
Q  659 taataaagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnn 758  Q
    |||| |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||||||||||||||  ||| ||||||       
T  18405588 taattaagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatggaaattttattctcaggaatttaggaa 18405489  T
Q  759 nnnnnnnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctc 857  Q
                  ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||||||||||    
T  18405488 aaat----------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctc 18405399  T
Q  858 cattgtaactttattcccaccctttt-cttgggaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacata 954  Q
    ||| | |||||||||| ||||||||| ||||| ||  |||| ||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||    
T  18405398 catgggaactttattctcacccttttccttggaaattttttttattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacata 18405299  T
Q  955 gacatgtatatttctat 971  Q
    | ||| || ||||||||    
T  18405298 ggcatatacatttctat 18405282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 666 - 755
Target Start/End: Complemental strand, 31938217 - 31938128
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  31938217 gggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttggaatttaaagatgaaaattttattccaaggtatttag 31938128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 664 - 955
Target Start/End: Original strand, 42773673 - 42773959
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    ||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||||  |||||||||| ||||||||||||||| ||||||            
T  42773673 aagggcgtgtttgtttcaagtttaccaaatttattcctagaaataacattccttggagtataaagatgggaattttattccaaggaatttaggaaaaat- 42773771  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  42773772 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 42773862  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||||||| |||||||||  |||| ||| ||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||    
T  42773863 gaactttattcccacccttttccttgggaaattttttttatccccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 42773959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 27555152 - 27555243
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  27555152 aagggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 27555243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 667 - 972
Target Start/End: Original strand, 40435628 - 40435928
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||||||||||| ||||||||||  || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||               
T  40435628 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat---- 40435723  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgtaa 865  Q
          ||||||| ||||| |||||||||||   ||||||||| ||||||  |  |||||| || || ||      ||||||||| |||||| || | ||    
T  40435724 ------atgtttggttaactttataatattcctaggaaccataaaaatagagattataataggtaaactatttatgaatttattcccatctctatgggaa 40435817  T
Q  866 ctttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| ||| |    
T  40435818 ctttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat 40435917  T
Q  962 atatttctatc 972  Q
    | |||||||||    
T  40435918 acatttctatc 40435928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 842 - 959
Target Start/End: Complemental strand, 6280102 - 6279981
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| |||||||||   ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  6280102 aatttattcccatctccatgagaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 6280003  T
Q  938 aacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||||    
T  6280002 aacttgtaacaaacatagacat 6279981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 8321971 - 8322273
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| ||||||||||  || ||||||||||| |||||| |||||||||  ||||||||| ||||| ||||||             
T  8321971 agggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttggaatataaagatgagaattttattacaaggaatttaggaaaaat-- 8322068  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | ||||||||||||  ||||||||| ||||||| |  |||||| || |||||      ||||||||||||||||||| |     
T  8322069 --------atgtttggttagctttataatattcataggaaccataaaaatagggattataataggtaaattatttatgaatttattctcatctccatggg 8322160  T
Q  864 aactttattcccacccttttcttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||| | |||||   ||||||||||||| ||| |  ||||||   | |||||| |||||||||||||||||||||||||||||    
T  8322161 aactttattcccacccttttccttggaaatttttttctattcccaagaatattttataccaaggaataaattttagtaaacttgtaacaaacatagacat 8322260  T
Q  960 gtatatttctatc 972  Q
     || |||||||||    
T  8322261 atacatttctatc 8322273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 39835656 - 39835566
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  39835656 agggtgtgtttgtttcaagtttaccaaatttatttctatgaataacattccttggaatataaagatgggaattttattccaaggaatttag 39835566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 781 - 976
Target Start/End: Original strand, 18405586 - 18405785
Alignment:
Q  781 ttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttattcccaccct 880  Q
    ||||||||||||||||    ||||||||| ||||||  |  |||||| ||||||||||    |||||||| |||||  ||   |||||||||||||||||    
T  18405586 ttaacattataatatttctaggaaccataaaaatagagattataataggtaattacacatggatttattcccatcttaatgagaactttattcccaccct 18405685  T
Q  881 tttctt--gggaaaattttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcgttt 976  Q
    ||||||  || ||||||||||||||| |||||||||  ||||   |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  18405686 tttctttaggaaaaattttctattcctaggaacattttatacctagaaataaaattttgtaaacttgtaacaaacatagatatgtatatttatatcgttt 18405785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 666 - 743
Target Start/End: Complemental strand, 36860104 - 36860027
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattc 743  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  36860104 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaacataaaaatggaaattttattc 36860027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 34049778 - 34049644
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||| |||| ||||||||| |||| |||||||||||||||||  |||| | | ||||||||||||||    
T  34049778 aatttattcccatctccatgggaactttattcccaccatttttcttgggaaattttttctattcccaggaacattttataccctggaataaaatttagta 34049679  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || ||| |||||    
T  34049678 aacttgtaacaaacatagacatatacattcctatc 34049644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 45747977 - 45747843
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | |||||||||||| |||||||| |||||||| |||| ||||||| |||||||||  |||| ||| ||||||||||||||    
T  45747977 aatttattctcatctccatgggaactttattcccccccttttccttgggaaattttttctattcctaggaacattttatacccgggaataaaatttagta 45747878  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  45747877 aacttgtaacaaacataggcatatacattcctatc 45747843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 665 - 748
Target Start/End: Original strand, 48873747 - 48873830
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaagg 748  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||| |||||||||||    
T  48873747 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaagg 48873830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 50673086 - 50672952
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||| ||||||  |||| ||  ||||||||||||||    
T  50673086 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttatacccgagaataaaatttagta 50672987  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || ||| |||||    
T  50672986 aacttgtaacaaacatagacatatacattcctatc 50672952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 668 - 754
Target Start/End: Original strand, 18931482 - 18931568
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  18931482 gtgtgtttgttttaagtttatcaaatttattcttaggaataacattccttggaatataaagatagaaattttattccaaggaattta 18931568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 23686513 - 23686603
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||| || |||||||||| ||||||||||||||| ||||||    
T  23686513 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgaaatataaagatgggaattttattccaaggaatttag 23686603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 292 - 428
Target Start/End: Original strand, 55875008 - 55875141
Alignment:
Q  292 aactagtctagtgctcgtgcgtcacacacgagtggataccaacggtattttacaaacgaaagaaccaataggagcagcctcaaatcatccaatatcaaac 391  Q
    |||||||||||||| ||||||| |||| || ||||||||||||  ||||||||||| || |||| ||| ||||||    ||| || ||||||||||||||    
T  55875008 aactagtctagtgcccgtgcgtgacacgcgggtggataccaacaatattttacaaatgagagaatcaacaggagct---tcagattatccaatatcaaac 55875104  T
Q  392 aaaaacataaacataatgacaacattaaagaatgttc 428  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  55875105 aaaaacaaaaacataacgacaacattaaagaatgttc 55875141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 773 - 954
Target Start/End: Complemental strand, 36858627 - 36858441
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||||||||||||||| ||| ||||||| ||||||| |  ||||||||||||||||    || |||||||||||| ||| | |||||||||    
T  36858627 atgtttgtttaacattataatattcccggaaaccataaaaatagggattataatatgtaattacatatgaaattattctcatcttcatgggaactttatt 36858528  T
Q  873 cccacccttttcttggga---aaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacata 954  Q
    ||||||||||| || | |      |||||||||| ||||||||  |||||| |||  ||||||||||||||||||||||||||||||    
T  36858527 cccacccttttatttgaattttttttttctattctcaggaacattttatacccgggcataaaatttagtaaacttgtaacaaacata 36858441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 666 - 976
Target Start/End: Original strand, 38394634 - 38394938
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    |||||||||||||||||||||| |||||||||| |||||| ||| ||| ||| ||||||||| |||  ||||||||| ||||||||||||              
T  38394634 gggtgtgtttgtttcaagtttaccaaatttatttctaagactaatatttcttagaacataaatatgagaattttatttcaaggtatttag---------- 38394723  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaa 865  Q
          ||||||||||||| |||||||||||   |||||||||| |||||||||  |||||| | |||||| |   ||||||||  |||||| ||   ||    
T  38394724 aaaaaagatgtttgcttaatattataatatttttgggaaccataaaaataggaattataataggaaattactcatgaatttatttccatctctatcagaa 38394823  T
Q  866 ctttattccca-cccttttcttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
    ||||||||||| |||||||||| || ||   |||| |||| |||| || |  ||||||| || |||||||||||||||||||||||||||||||  ||||    
T  38394824 ctttattcccaccccttttctttgggaatttttttatatttccagaaatattttatactagg-aataaaatttagtaaacttgtaacaaacataagcatg 38394922  T
Q  961 tatatttctatcgttt 976  Q
    |||||| | |||||||    
T  38394923 tatattcccatcgttt 38394938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 935851 - 935942
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||| | ||||||||||||| | ||||||    
T  935851 aagggtgtgtttgtttcaagtttaccaaatttattcttaagaataacatttcttggaatataaagataggaattttattccaaagaatttag 935942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 936020 - 936137
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacattata--ctcggaaataaaatttagta 937  Q
    ||||||||||||| ||||| | |||||||||||||||||||| |||| |||| |||| ||||||||||||||||| ||  | ||| ||||||||||||||    
T  936020 aatttattctcatttccatgggaactttattcccaccctttttcttgtgaaattttttctattcccaggaacattttatgcccgggaataaaatttagta 936119  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  936120 aacttgtaacaaacatag 936137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 842 - 955
Target Start/End: Complemental strand, 25916214 - 25916097
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||| ||| | ||||||||||||||||||||| |||||||| |||| |||||||||| ||||||  |||| ||| ||||||||||||||    
T  25916214 aatttattcccatcttcatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttatacccgggaataaaatttagta 25916115  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  25916114 aacttgtaacaaacatag 25916097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 673 - 755
Target Start/End: Complemental strand, 50673245 - 50673163
Alignment:
Q  673 tttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||  ||||||||||||||| ||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagatgagaattttattccaaggaatttag 50673163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 665 - 754
Target Start/End: Complemental strand, 6280270 - 6280181
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||| || | ||||||||||||||| |||||    
T  6280270 agggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaaaataggaattttattccaaggaattta 6280181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 673 - 754
Target Start/End: Complemental strand, 34238295 - 34238214
Alignment:
Q  673 tttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||  ||||||||||||||| |||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacattccttggaatataaagatgagaattttattccaaggaattta 34238214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 23686681 - 23686815
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||| || |||  ||||   | |||||| |||||||    
T  23686681 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaatattttataccaaggaataaattttagta 23686780  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| ||||||||||||    
T  23686781 aacttgtaacaaacataggcatatatatttctatc 23686815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 842 - 959
Target Start/End: Original strand, 27942631 - 27942752
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||||||| || || | |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||||||||    
T  27942631 aatttattctcatttcaatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 27942730  T
Q  938 aacttgtaacaaacatagacat 959  Q
    ||||| ||| ||||||| ||||    
T  27942731 aacttataataaacataaacat 27942752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 842 - 955
Target Start/End: Complemental strand, 34238135 - 34238018
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaat-tttctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||| | |||||||||||| |||||||  ||||   | |||||| |||||||    
T  34238135 aatttattctcatctccatgggaactttattcccacccttttccttgggaaattgtttctattcccaagaacattttataccaaggaataaattttagta 34238036  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  34238035 aacttgtaacaaacatag 34238018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 842 - 954
Target Start/End: Complemental strand, 39835488 - 39835372
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    |||||||||| |||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  39835488 aatttattctaatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 39835389  T
Q  938 aacttgtaacaaacata 954  Q
    |||||||||||||||||    
T  39835388 aacttgtaacaaacata 39835372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 18931647 - 18931781
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||| ||||  | ||||| ||||  |||||||||||||||||  |||| ||| ||||||||||||||    
T  18931647 aatttattcccatctccatgggaactttattcccaccatttttcttggaaatttttttctattcccaggaacattttatacacgggaataaaatttagta 18931746  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||| || ||||||||||||| || ||| |||||    
T  18931747 aacttataccaaacatagacatatacattcctatc 18931781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 773 - 972
Target Start/End: Original strand, 38414032 - 38414234
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    |||||||  |||| |||||||||||   | ||||||| |||||||||  |||||| |||| ||||    ||||||||  |||||||||   |||||||||    
T  38414032 atgtttgggtaactttataatattcttagaaaccataaaaataggaattataataggtaactacatatgaatttattaccatctccatgagaactttatt 38414131  T
Q  873 cccacccttttc-ttgggaaaattttc-tattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttc 968  Q
    |||||||||||| |||||||| ||||  ||||||| | ||||||  ||||  |||| ||||||||||||||||| | |||||||||||||||||||||||    
T  38414132 cccacccttttccttgggaaattttttatattcccggaaacattttatacatggaa-taaaatttagtaaacttattacaaacatagacatgtatatttc 38414230  T
Q  969 tatc 972  Q
    ||||    
T  38414231 tatc 38414234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 47670256 - 47670390
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||| ||| | ||||||||| ||||| ||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  47670256 aatttattctcatcttcatggaaactttatttccaccattttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 47670355  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  47670356 aacttgtaacaaacataggcatatacatttctatc 47670390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 32953249 - 32953339
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||| ||||||||||||||||||| |||||||| |||  ||||| |||| |||||| |||||||||| ||||||||||||||| ||||||    
T  32953249 agggtatgtttgtttcaagtttatctaatttatttctagaaataatattcattggaatataaagatgggaattttattccaaggaatttag 32953339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 18405128 - 18405218
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||| ||||||  ||||||||||| || ||||||||||||||| || |||||||||| || | |||||||||||||||||    
T  18405128 aagggtgtgtttgttttaagtttgccaaatttattcttaggaataacattccttgaaatataaagatgggaa-tgtattccaaggtatttag 18405218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 32953417 - 32953551
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| |||||||||   ||||||||||||||| ||||| |||||||| |||| ||||||| |||||||||  |||| ||  ||||||||||||||    
T  32953417 aatttattcccatctccatgagaactttattcccaccattttccttgggaaattttttctattcctaggaacattttatacccgagaataaaatttagta 32953516  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||| |||| ||| || ||| |||||    
T  32953517 aacttgtaacaaagataggcatatacattcctatc 32953551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 38413902 - 38413992
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||| |||||||||||||||||| |||||||| |  ||  ||||||||||||||||| |||||||||  ||||| ||||||||||||||||    
T  38413902 agggcgtgtttgtttcaagtttaccaaatttaattttagaaataacattccttggaatataaagatgagaatttaattccaaggtatttag 38413992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 667 - 755
Target Start/End: Original strand, 27942465 - 27942553
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||  | |||| ||||| |||  ||||||||| ||||| ||||||    
T  27942465 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttttaggaatataaatatgagaattttatttcaaggaatttag 27942553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 666 - 754
Target Start/End: Original strand, 30790275 - 30790362
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||| ||||||| |||||||||  || |||||||||| |||||||    
T  30790275 gggtgtgtttgtttcaagtttagcaaatttatttctaggagtaacatt-cttggaatataaagatgagaaatttattccaaagtattta 30790362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 842 - 963
Target Start/End: Complemental strand, 31938051 - 31937925
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt--cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagt 936  Q
    ||||||||||||||||||| | ||||||||||||||||||||  ||||| |||  |||| |||||||| |||||  ||||| | || ||||||||||| |    
T  31938051 aatttattctcatctccatgggaactttattcccaccctttttccttggaaaattttttttattcccaagaacattttatatttgggaataaaatttaat 31937952  T
Q  937 aaacttgtaacaaacatagacatgtat 963  Q
    |||||| |||||||||||  |||||||    
T  31937951 aaacttctaacaaacatatgcatgtat 31937925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 924 - 976
Target Start/End: Original strand, 44309740 - 44309792
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcgttt 976  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  44309740 aataaaatttagtaaccttgtaacaaacatagacatgcatatttctatcgttt 44309792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 867 - 972
Target Start/End: Original strand, 30415821 - 30415930
Alignment:
Q  867 tttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    |||||||||||| ||||||| || |||||||  ||||||| | |||||||  ||| | || ||||||||||||||||||||||||||||| |||||| ||    
T  30415821 tttattcccaccattttctttgggaaattttttctattccaaagaacattttatatttgggaataaaatttagtaaacttgtaacaaacacagacatata 30415920  T
Q  963 tatttctatc 972  Q
    |||| |||||    
T  30415921 tattcctatc 30415930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 669 - 755
Target Start/End: Original strand, 52469427 - 52469514
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattcc-ttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||| ||||| ||||||||||||| || |||||||||||| |||||| |||||||| |||||||||| ||||  |||||||    
T  52469427 tgtgtttgttttaagttaatcaaatttattcttaggaataacattcctttggaatataaagattgaaattttataccaaaatatttag 52469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 959
Target Start/End: Original strand, 52469592 - 52469713
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaat--tttctattcccaggaacattatact--cggaaataaaatttagta 937  Q
    ||||||||  ||||||||| | |||||||||||||||  |||| | ||||||   |||||||||| || |||||| || |  ||||||||||||||| ||    
T  52469592 aatttatttccatctccatgggaactttattcccaccaatttccttggaaaaaaatttctattcctagaaacattttattgccggaaataaaatttaata 52469691  T
Q  938 aacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||||    
T  52469692 aacttgtaacaaacatagacat 52469713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 673 - 755
Target Start/End: Complemental strand, 37014724 - 37014642
Alignment:
Q  673 tttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||  |||||||||||||||||||| |||  |||||| |||||||||  |||||||||| ||| |||||||    
T  37014724 tttgtttcaagtttacaaaatttattcctaagaataatattttttggaatataaagatgcgaattttattcgaagatatttag 37014642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 665 - 721
Target Start/End: Complemental strand, 25916362 - 25916305
Alignment:
Q  665 agggtgtgtttgtttc-aagtttatcaaatttattcctaagaataacattccttggaa 721  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  25916362 agggtgtgtttgtttctaagtttaccaaatttattcctaggaataacattccttggaa 25916305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 924 - 972
Target Start/End: Complemental strand, 12276006 - 12275958
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  12276006 aataaaatttagtaaacttgtaacaaacataaacatatatatttctatc 12275958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 666 - 754
Target Start/End: Original strand, 36858135 - 36858222
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||| ||||| ||||||||| |||||||||| |||||||||||||||||| || | | |||||| ||||| ||| |||||||||||    
T  36858135 gggtgtgcttgttacaagtttataaaatttattcttaagaataacattccttgtaatacacagatgggaatttcatt-caaggtattta 36858222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 842 - 959
Target Start/End: Complemental strand, 47426423 - 47426301
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt--cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagt 936  Q
    |||||||| |||||| ||| | ||||||||| ||||||||||  ||||  || ||||| ||||| |||||||||||  |||    |||||||||||||||    
T  47426423 aatttattttcatcttcatgggaactttattgccacccttttttcttgataatatttttctatttccaggaacattttatatcaagaaataaaatttagt 47426324  T
Q  937 aaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||||||    
T  47426323 aaacttgtaacaaacatagacat 47426301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 923 - 976
Target Start/End: Complemental strand, 24805181 - 24805128
Alignment:
Q  923 aaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcgttt 976  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| | ||||||    
T  24805181 aaataaaatttagtaaatttgtaacaaacataaacatgtatatttttttcgttt 24805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 924 - 972
Target Start/End: Complemental strand, 10400900 - 10400852
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||||    
T  10400900 aataaaatttagtaaacttgtaataaacatagacatatacatttctatc 10400852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 924 - 972
Target Start/End: Original strand, 27555390 - 27555438
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||    
T  27555390 aataaaatttagtaaacttgtaacaaacatagacatatacattcctatc 27555438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 707 - 755
Target Start/End: Complemental strand, 34049904 - 34049856
Alignment:
Q  707 taacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  34049904 taacattccttggaatataaagatgggaattttattccaaggaatttag 34049856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 39498719 - 39498853
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| |||||| ||   ||||||||| ||||||||||| | ||||  ||||  ||||||||| |||||||  ||||   | |||||| |||||||    
T  39498719 aatttattcccatctctatgagaactttatttccacccttttccttggaattttttttctattcccatgaacattttataccaaggaataaattttagta 39498818  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||| |||| || |||||||||    
T  39498819 aacttgtaacaaacataaacatatacatttctatc 39498853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 39502058 - 39502192
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| |||||| ||   ||||||||| ||||||||||| | ||||  ||||  ||||||||| |||||||  ||||   | |||||| |||||||    
T  39502058 aatttattcccatctctatgagaactttatttccacccttttccttggaattttttttctattcccatgaacattttataccaaggaataaattttagta 39502157  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||| |||| || |||||||||    
T  39502158 aacttgtaacaaacataaacatatacatttctatc 39502192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 601 - 665
Target Start/End: Original strand, 55875388 - 55875452
Alignment:
Q  601 attaataataatgatgtgaattagagactttaaataaaggatgagataagattttagataataaa 665  Q
    ||||||||||||  |||||||||||||||  ||||||||||| ||||||||||||| ||| ||||    
T  55875388 attaataataattgtgtgaattagagactccaaataaaggataagataagattttatatagtaaa 55875452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 772 - 972
Target Start/End: Original strand, 18094072 - 18094277
Alignment:
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttat 871  Q
    |||||||  ||||||||||||||||    |||| |||| ||||| |||  |||||| ||| ||||||   ||||||||||||||| ||| | ||||||||    
T  18094072 gatgtttagttaacattataatatttttaggaatcataaaaatatgaattataataggtagttacacatgaatttattctcatcttcatgggaactttat 18094171  T
Q  872 tcccacccttttcttgggaa----aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatat 965  Q
    || |||| ||||||| ||||      ||||||||||| || ||||  |||||| || |||||||| ||||||||||| || ||||||||   | ||||||    
T  18094172 tctcaccattttctttggaattttttttttctattcctagaaacattttatacccgaaaataaaa-ttagtaaacttctagcaaacataagaaggtatat 18094270  T
Q  966 ttctatc 972  Q
    |||||||    
T  18094271 ttctatc 18094277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 924 - 961
Target Start/End: Original strand, 26165344 - 26165381
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  26165344 aataaaatttagtaaacttgtaacaaacataaacatgt 26165381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 924 - 972
Target Start/End: Complemental strand, 22654572 - 22654524
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||| ||||| ||||||||| |||||||| ||||||||||||||||    
T  22654572 aataaaaattagttaacttgtaataaacataggcatgtatatttctatc 22654524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 842 - 897
Target Start/End: Original strand, 27555320 - 27555376
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt 897  Q
    ||||||||| ||||||||| | |||||||||||||||||||| ||||||||| ||||    
T  27555320 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttt 27555376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 703 - 755
Target Start/End: Original strand, 39498589 - 39498641
Alignment:
Q  703 agaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||| |||||||||  |||||||||| |||| ||||||    
T  39498589 agaataacattccttggaatataaagatgagaattttattctaaggaatttag 39498641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 703 - 755
Target Start/End: Original strand, 39501928 - 39501980
Alignment:
Q  703 agaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||| |||||||||  |||||||||| |||| ||||||    
T  39501928 agaataacattccttggaatataaagatgagaattttattctaaggaatttag 39501980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 842 - 897
Target Start/End: Original strand, 48873915 - 48873971
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt 897  Q
    ||||||||| ||||||||| | |||||||||||||||||||| ||||||||| ||||    
T  48873915 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttt 48873971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 924 - 970
Target Start/End: Complemental strand, 9327341 - 9327294
Alignment:
Q  924 aataaaatttagtaaacttgtaa-caaacatagacatgtatatttcta 970  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  9327341 aataaaatttagtaaacttataaacaaacatagacatatatatttcta 9327294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 924 - 970
Target Start/End: Complemental strand, 9374100 - 9374053
Alignment:
Q  924 aataaaatttagtaaacttgtaa-caaacatagacatgtatatttcta 970  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  9374100 aataaaatttagtaaacttataaacaaacatagacatatatatttcta 9374053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 928 - 971
Target Start/End: Original strand, 54478529 - 54478572
Alignment:
Q  928 aaatttagtaaacttgtaacaaacatagacatgtatatttctat 971  Q
    ||||||||||||||| ||||||||||| || |||||||||||||    
T  54478529 aaatttagtaaacttataacaaacatacacgtgtatatttctat 54478572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 669 - 718
Target Start/End: Original strand, 32713384 - 32713433
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttg 718  Q
    ||||||||||| |||||| ||||||||||| |||| |||||| |||||||    
T  32713384 tgtgtttgttttaagtttgtcaaatttatttctaaaaataacgttccttg 32713433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 842 - 953
Target Start/End: Complemental strand, 37014566 - 37014451
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaa--ttttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||||||||| |||   ||||||||| |||| |||||||| || |||  ||||||||||| | |||||  ||||||  ||| |||||||||| ||    
T  37014566 aatttattctcatcttcatgagaactttatttccactcttttctttgggaaattttttctattcctatgaacatgttatacctggatataaaatttaata 37014467  T
Q  938 aacttgtaacaaacat 953  Q
    ||||  ||||||||||    
T  37014466 aactcataacaaacat 37014451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 2e-61; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 489 - 665
Target Start/End: Complemental strand, 36122286 - 36122110
Alignment:
Q  489 gagcaatacaaccatattgattaacacaccggtttatttcgttgttgatttcaaagtcaataaatcaacattggctttaaactaccaagacaattgtaag 588  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||     
T  36122286 gagcaatacaaccatattgattaacacaccgatttatatcgttgttgatttcaaagtcaataaatcaacattgagttcaaactaccaagacaattgtaat 36122187  T
Q  589 gatccagctctgattaataataatgatgtgaattagagactttaaataaaggatgagataagattttagataataaa 665  Q
     |||||||||| ||||||||||||| |||||||||||||||  |||||||||||||||||| |||||| ||| ||||    
T  36122186 aatccagctctcattaataataatggtgtgaattagagactccaaataaaggatgagataaaattttatatagtaaa 36122110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 665 - 952
Target Start/End: Complemental strand, 8476657 - 8476375
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||             
T  8476657 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatggaaattttattccaaggaatttaggaaaaat-- 8476560  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |     
T  8476559 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 8476468  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaaca 952  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||    
T  8476467 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaaca 8476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 53166073 - 53165772
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||  |||||||||||||||||||||             
T  53166073 agggtgtgtttgtttcaagtttatccaatttatttctaagaataacattccttgaaatataaagatgggtattttattccaaggtatttaggaaaaat-- 53165976  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
            ||||||| ||||| |||||||||||   |||| |||| ||||||  |  |||||| |||| ||      ||||||||||||||||||| | |    
T  53165975 --------atgtttggttaaccttataatattcctaggaatcataaaaatagatattataataggtaactatttatgaatttattctcatctccatggga 53165884  T
Q  865 actttattcccaccc-ttttcttgg-gaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
    ||||||||||||||| |||||||||  |||||||||||||||||| ||||  |||||  ||| |||||||||||||||||||||||||||||||  |||     
T  53165883 actttattcccaccctttttcttggaaaaaattttctattcccagaaacattttatatccgggaataaaatttagtaaacttgtaacaaacataagcata 53165784  T
Q  961 tatatttctatc 972  Q
    |||||| |||||    
T  53165783 tatattcctatc 53165772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 666 - 972
Target Start/End: Complemental strand, 28770557 - 28770257
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||              
T  28770557 gggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaacataatgatgagaattttattccaaggtatatag---------- 28770468  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaa 865  Q
          |||||||| ||||| ||||||||||  ||||||||||| ||||||| |  |||||| |||||||||    || | |||| ||||| |||   ||    
T  28770467 aaaaatgatgtttgtttaacgttataatattatcgggaaccataaaaatagggattataataggtaattacatatgaaatcattcccatcttcatgagaa 28770368  T
Q  866 ctttattcccacccttttc-ttgggaaaa-ttttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    ||||||||||||| ||||| ||||||||| ||||||||| | ||||||   |||||| | | ||| |||||||||||||||||| ||||||||||||||     
T  28770367 ctttattcccaccattttctttgggaaaatttttctattgctaggaacgttttatacccaggaatcaaatttagtaaacttgtaccaaacatagacatgc 28770268  T
Q  962 atatttctatc 972  Q
    |||||||||||    
T  28770267 atatttctatc 28770257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 26848744 - 26849046
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||             
T  26848744 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat-- 26848841  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||| ||||| |     
T  26848842 --------atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatttccatggg 26848933  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||| |||    
T  26848934 aactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcat 26849033  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  26849034 atacattcctatc 26849046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 33218262 - 33217960
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||             
T  33218262 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat-- 33218165  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| |||||| || |     
T  33218164 --------atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctctatggg 33218073  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||||||| ||||||||||| |||| ||||||||||||||| |||    
T  33218072 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttatactcgggaataaaatttaataaatttgtaacaaacataggcat 33217973  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  33217972 atacattcctatc 33217960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 669 - 959
Target Start/End: Complemental strand, 31611330 - 31611045
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnn 768  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||                 
T  31611330 tgtgtttgtttcaagtttaccaaatttattcttatgaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaat------ 31611237  T
Q  769 nnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaact 867  Q
        ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| | ||||    
T  31611236 ----atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccataggaact 31611141  T
Q  868 ttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||| | ||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||    
T  31611140 ttattcccaccctttttcatgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacat 31611045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 664 - 972
Target Start/End: Complemental strand, 11239470 - 11239167
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||            
T  11239470 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat- 11239372  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  11239371 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 11239281  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| ||    
T  11239280 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggca 11239181  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  11239180 tatacatttctatc 11239167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 662 - 754
Target Start/End: Original strand, 46359671 - 46359763
Alignment:
Q  662 taaagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  46359671 taaagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 46359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 669 - 955
Target Start/End: Complemental strand, 47115202 - 47114921
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnn 768  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||                 
T  47115202 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat------ 47115109  T
Q  769 nnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgtaact 867  Q
        ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| | ||||    
T  47115108 ----atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaact 47115013  T
Q  868 ttattcccaccctttt-cttgggaa-aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    |||||||||||||||| ||||||||   |||| |||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  47115012 ttattcccacccttttccttgggaatttttttttatttccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacatag 47114921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 667 - 972
Target Start/End: Original strand, 1098923 - 1099222
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||               
T  1098923 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat---- 1099018  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaac 866  Q
          |||||||  || | ||||||||||    ||||||||| ||||||| |  |||||| |||| ||      ||||||||| ||||||||| | |||    
T  1099019 ------atgtttggctagctttataatatttctaggaaccataaaaatagggattataataggtaaatatttatgaatttattcccatctccatgggaac 1099112  T
Q  867 tttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| |||||||||||||||||||||||||  || ||    
T  1099113 tttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagggatata 1099212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 772 - 976
Target Start/End: Complemental strand, 33647954 - 33647746
Alignment:
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttat 871  Q
    ||||||||||||| |||||||||||| ||  ||||||| |||||| ||  ||||||  ||||||||||  ||||||||||||||| ||  | ||||||||    
T  33647954 gatgtttgcttaatattataatattctcgaaaaccataaaaatagaaattataatagataattacacgtgaatttattctcatcttcaaggaaactttat 33647855  T
Q  872 tcccacccttttcttgggaaa--attttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatattt 967  Q
    | |||| |||||||| |||||   |||| ||||| ||| |||   |||||| | | ||||||||||||||||||||||||||||||||| ||||||||||    
T  33647854 ttccactcttttctttggaaatttttttatattctcagaaacgttttatacccaggaataaaatttagtaaacttgtaacaaacatagagatgtatattt 33647755  T
Q  968 ctatcgttt 976  Q
    ||| |||||    
T  33647754 ctaacgttt 33647746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 6832272 - 6832181
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||    
T  6832272 aagggtgtgtttgtttcaaatttaccaaatttattcctaagaataacattacttggaatataaagatgagaattttattccaaggtatttag 6832181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 40907987 - 40908078
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||||||| ||||||||||||||| ||||||    
T  40907987 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaaggaatttag 40908078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 44952030 - 44952120
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  44952030 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 44952120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 664 - 972
Target Start/End: Complemental strand, 48340107 - 48339804
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||  ||||||||||||||| ||||||            
T  48340107 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttattccaaggaatttaggaaaaat- 48340009  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  48340008 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 48339918  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||||||| |||||||||  ||||||||||||| |||||  ||||||   | |||||| ||||||||||||||||||||||||| ||    
T  48339917 gaactttattcccacccttttccttgggaaattttttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataggca 48339818  T
Q  959 tgtatatttctatc 972  Q
    | || |||| ||||    
T  48339817 tatacatttatatc 48339804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 665 - 754
Target Start/End: Complemental strand, 6231850 - 6231761
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| | ||||||||||||||| |||||    
T  6231850 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagataggaattttattccaaggaattta 6231761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 667 - 755
Target Start/End: Complemental strand, 20414812 - 20414724
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| | ||||||    
T  20414812 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaagaatttag 20414724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 20297514 - 20297817
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||| ||||||| ||||||||||| || ||||||||||| |||||| |||||||||| ||||||||| ||||| ||||||            
T  20297514 aagggtgtgtttgttttaagtttaccaaatttattcttaggaataacattctttggaatataaagatgggaattttatttcaaggaatttaggaaaaat- 20297612  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| || || |||||||||||   ||||||||| ||||||| |  |||||| || |||||      ||||||||| ||||||||| |    
T  20297613 ---------atgtttggttgactttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatctccatgg 20297703  T
Q  863 taactttattcccacccttttcttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     ||||||||||||||||||||| | |||||   |||||||||||||||||||  ||||||   | |||||| |||| |||||||||||||||||||| ||    
T  20297704 gaactttattcccacccttttccttggaaatttttttctattcccaggaacattttataccaaggaataaattttaataaacttgtaacaaacataggca 20297803  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  20297804 tatacatttctatc 20297817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 666 - 972
Target Start/End: Original strand, 27822994 - 27823298
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    |||||||||||||||||||||| ||||||||||  || ||||||||||| || ||||||||| |||  |||||||||  |||||||||||              
T  27822994 gggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttcgaacataaatatgagaattttattttaaggtatttagaaaaaaaaaa 27823093  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaa 865  Q
           || ||||||||||||||||||||||   | || |||| ||||| | |  |||| | ||||||||||   ||||| ||||||||| |||   ||    
T  27823094 a------atatttgcttaacattataatattcctagaaatcataaaaatatggattataacaggtaattacacatgaatttgttctcatcttcatgagaa 27823187  T
Q  866 ctttattcccacccttttc-ttgggaaaatttt-ctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
     |||||||||||||||||| ||||||||||||| ||||| | | ||||   |||||||||| ||||||||||||||||||| || ||||||||||||| |    
T  27823188 ttttattcccacccttttctttgggaaaattttcctatttcgatgaacgttttatactcgggaataaaatttagtaaacttatagcaaacatagacattt 27823287  T
Q  962 atatttctatc 972  Q
    |||||||||||    
T  27823288 atatttctatc 27823298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 40908155 - 40908289
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||| ||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  40908155 aatttattcccatcttcatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 40908254  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  40908255 aacttgtaacaaacataggcatatacattcctatc 40908289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 668 - 754
Target Start/End: Original strand, 24783934 - 24784020
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||    
T  24783934 gtgtgtttgtttcaagtttaccaaatttattcataagaataacattccttggaatataaagatgagaattttattctaaggtattta 24784020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 667 - 972
Target Start/End: Complemental strand, 31436269 - 31435970
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||||||||||| |||||||||||||   |||||||||| || ||| |||||||| | |||||||||||||||||| |||               
T  31436269 ggtgtgtttgtttcaagtttaccaaatttattcctggaaataacattctttagaatataaagataggaattttattccaaggtatatagaaaaaac---- 31436174  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaac 866  Q
          ||||||| |||   ||||||||||    |||| |||| ||||| | |  |||||| |||| ||||  | ||||||||||||||||||| | |||    
T  31436173 ------atgtttggttagttttataatatttcttggaatcataaaaataaggattataataggtaactacattagaatttattctcatctccatgggaac 31436080  T
Q  867 tttattcccacccttttctt-gggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    ||||||||||||  |||||| ||||||||||| |||||  ||||||||||  |||| | | |||||||||||||||||||||||||||||||| ||| ||    
T  31436079 tttattcccaccaatttctttgggaaaatttttctattttcaggaacattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatata 31435980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 668 - 893
Target Start/End: Original strand, 40584336 - 40584551
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||  || |||||||| | ||||||||| |||||||||||                 
T  40584336 gtgtgtttgtttcaagtgtaacaaatttattcctaagaataacattccttcaaatataaagataggaattttatttcaaggtattta----------aaa 40584425  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataa-tttattctcatctccattgtaac 866  Q
        |||||||| |||||||||||||||||   |||||| || |||||||||  |||||| || ||||||| |||| ||||||| ||||||||| | |||    
T  40584426 aaaagatgtttggttaacattataatattccaaggaaccttaaaaataggaaatataataggtgattacac-ataattttattcccatctccatgggaac 40584524  T
Q  867 tttattcccacccttttcttgggaaaa 893  Q
    |||||||||||| ||||||| ||||||    
T  40584525 tttattcccaccattttctttggaaaa 40584551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 46359842 - 46359959
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaa-attttctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| ||||||||||| || |||||||  |||| ||| ||||||||||||||    
T  46359842 aatttattcccatctccatgggaactttattcccacccttttccttgggaaatattttctattcacaagaacattttatacccgggaataaaatttagta 46359941  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  46359942 aacttgtaacaaacatag 46359959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 668 - 971
Target Start/End: Complemental strand, 43132502 - 43132205
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    ||||||||||||||||||||  |||||||||| || |||||||||||||||||| |||||||||  ||||||||||||||||||||||                
T  43132502 gtgtgtttgtttcaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtatttaggaaaaat----- 43132408  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
         ||||||| ||||| |||||||||||   ||||||||  ||||||| |  |||||| |||| ||      |||||| |||||||||| | | ||||    
T  43132407 -----atgtttggttaactttataatattcctaggaaccatgaaaatagggattataataggtaactatttatgaatttaatctcatctccgtgggaact 43132313  T
Q  868 ttattcccaccctttt-cttggg-aaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
     ||||||||||||||| |||||| |||| ||| ||||| |||| |||  ||||||  | |||||||||||| |||||||||||||||||||| ||| |||    
T  43132312 ctattcccacccttttccttgggaaaaaatttatattctcaggtacattttatacatgaaaataaaatttaataaacttgtaacaaacataggcatatat 43132213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 6231682 - 6231548
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||| ||||| |||||||| |||| ||||||| |||||||||  |||| ||| ||||||||||||||    
T  6231682 aatttattcccatctccatgggaactttattcccaccattttcattgggaaattttttctattccaaggaacattttatacccgggaataaaatttagta 6231583  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  6231582 aacttgtaacaaacataggcatatacattcctatc 6231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 666 - 954
Target Start/End: Complemental strand, 9320797 - 9320513
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattcc-aaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||||||| |||||||||  ||||||||||| |||| ||||||             
T  9320797 gggtgtgtttgtttcaagtttatgaaatttattcataggaataacattccttggaatataaagatgagaattttattcctaaggaatttaggaaaaat-- 9320700  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| | ||||||| || || ||      ||||||||  ||||||||| |     
T  9320699 --------atgtttggttagctttataatattcctaggaaccataaaaatagggatcataataagtaaactatttatgaatttatttccatctccatggg 9320608  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacata 954  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| |  |||||| ||| |||||||||||||||||||||||||||||||    
T  9320607 aactttattcccacctttttccttaggaaattttttctattcccaggaatattttatacccgggaataaaatttagtaaacttgtaacaaacata 9320513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 10823067 - 10822976
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||  || |||||||||  ||||||||||||||||||||||    
T  10823067 aagggtgtgtttgtttcaagtttagcaaatttatttctaggaataacattccttacaatataaagatgagaattttattccaaggtatttag 10822976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 44952198 - 44952332
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||| ||||||  ||||   | |||||| |||||||    
T  44952198 aatttattctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttataccaaggaataaattttagta 44952297  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  44952298 aacttgtaacaaacataggcatatacatttctatc 44952332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 669 - 755
Target Start/End: Original strand, 6927817 - 6927903
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||||||||| |||||||||  |||||||||| |||||||||||    
T  6927817 tgtgtttgttttaagtttatcaaatttattactaggaataacattccttggaatataaagatgagaattttattctaaggtatttag 6927903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 672 - 965
Target Start/End: Complemental strand, 38140710 - 38140422
Alignment:
Q  672 gtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnnnnn 771  Q
    ||||||||||| ||||| ||||||||| ||| |||||||||||||||||| |||||| ||  |||||||||||||||||| |||                    
T  38140710 gtttgtttcaattttataaaatttatttctaggaataacattccttggaatataaaggtgtgaattttattccaaggtatatagaaaaaa---------- 38140621  T
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttat 871  Q
    |||||||| |||||||||||||||||  |||||||  | ||||| | |  |||||| | ||||||||   || |||||||||||| || || ||||||||    
T  38140620 gatgtttgattaacattataatattcctgggaacctaaaaaataaggattataataggaaattacacatgaacttattctcatcttca-tggaactttat 38140522  T
Q  872 tcccacccttttcttggg--aaaattttctattcccaggaaca----ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatat 965  Q
    || |||||||||||| ||  |||| |||||||||| |||||||    |||||||||  |||||| | |||||||||| |||||||||| ||||| |||||    
T  38140521 tctcacccttttctttggaaaaaaatttctattcctaggaacatattttatactcgtcaataaattatagtaaacttataacaaacattgacatatatat 38140422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 665 - 754
Target Start/End: Original strand, 24574289 - 24574378
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||| || |||||||||  ||||||||||||||| |||||    
T  24574289 agggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgagaattttattccaaggaattta 24574378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 668 - 755
Target Start/End: Complemental strand, 43719271 - 43719184
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||| ||  ||||||||||||||| ||||||    
T  43719271 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagttgagaattttattccaaggaatttag 43719184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 667 - 753
Target Start/End: Original strand, 32070994 - 32071080
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattt 753  Q
    |||| |||||||| || ||||||||||||||||||| |||||||||| ||||||| |||||||||  ||||||||||||||||||||    
T  32070994 ggtgggtttgttttaaatttatcaaatttattcctatgaataacatttcttggaatataaagatgagaattttattccaaggtattt 32071080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 667 - 755
Target Start/End: Complemental strand, 26849492 - 26849404
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||| ||||||| ||||||||||  || |||||| ||| ||||||| |||||||||||||||||||| ||||||||||||    
T  26849492 ggtgtgtttgttttaagtttaccaaatttatttttaggaataatatttcttggaatataaagatggaaattttatttcaaggtatttag 26849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 667 - 747
Target Start/End: Original strand, 29512324 - 29512404
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaag 747  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||| ||||    
T  29512324 ggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttatttcaag 29512404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 28124617 - 28124483
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaattttc-tattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||| ||| | ||||||||||||||||||||| |||||||| ||||  |||||| |||||||||  |||| ||| ||||||||||||||    
T  28124617 aatttattcccatcttcatgggaactttattcccacccttttccttgggaaattttttatattccgaggaacattttatacccgggaataaaatttagta 28124518  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||| |||||||||||| ||| || ||| |||||    
T  28124517 aacttataacaaacataggcatatacattcctatc 28124483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 844 - 972
Target Start/End: Complemental strand, 12228434 - 12228303
Alignment:
Q  844 tttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacattat--actcggaaataaaatttagtaaa 939  Q
    ||||||||||||||||| | |||||||||| |||| ||||||| ||||| ||||  |||||||||| |||||| |  || ||  ||||||||||||||||    
T  12228434 tttattctcatctccatgggaactttattctcacc-ttttctttggaaatttttttctattcccagaaacattttgtacccgagaataaaatttagtaaa 12228336  T
Q  940 cttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||| |||||||| ||| ||||||||||||    
T  12228335 cttgtaataaacataggcatatatatttctatc 12228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 292 - 424
Target Start/End: Complemental strand, 36122480 - 36122346
Alignment:
Q  292 aactagtctagtgctcgtgcgt----cacacacgagtggataccaacggtattttacaaacgaaagaaccaataggagcagcctcaaatcatccaatatc 387  Q
    |||||||||||||| |||||||    ||| |||| ||||||||||||  ||||||| ||| ||||||||||||| ||||   ||||||| ||| |||||     
T  36122480 aactagtctagtgcccgtgcgtgacgcacgcacgggtggataccaacaatattttataaatgaaagaaccaatatgagc---ctcaaattatctaatata 36122384  T
Q  388 aaacaaaaa-cataaacataatgacaacattaaagaat 424  Q
    ||| ||||| ||||||||||||||||||||||||||||    
T  36122383 aaagaaaaaacataaacataatgacaacattaaagaat 36122346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 667 - 955
Target Start/End: Complemental strand, 12931287 - 12931005
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    |||||||||||||||||| || ||||||||||||||| | |||||||| ||  |||||||||||  |||  |||||| ||||||||||                
T  12931287 ggtgtgtttgtttcaagtgtaccaaatttattcctaaaagtaacattctttataacataaagataaaaaaattattctaaggtattta----------aa 12931198  T
Q  767 nnnnngatgtttgcttaacattataata-ttcacgggaaccatataaataggaaccataatatgtaattacacgataa-tttattctcatctccattgta 864  Q
         |||||||| |||| ||||||||| |||| || || | || ||||| | |  |||||| |||||||||| |||| ||||||| |||||| || | |    
T  12931197 aaaaagatgtttgattaaaattataatatttcaaggaaatcttaaaaataaggaatataataggtaattacac-ataattttattcccatctctatggga 12931099  T
Q  865 actttattcccacccttttc-ttgggaaaa-ttttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    |||||||||||||| ||||| ||| ||||| |||||||||||||  ||||  |||||| ||| ||||||||||||||||||||||||||||||||    
T  12931098 actttattcccaccattttctttgagaaaacttttctattcccataaacattttatac-cgggaataaaatttagtaaacttgtaacaaacatag 12931005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 844 - 972
Target Start/End: Complemental strand, 10822897 - 10822765
Alignment:
Q  844 tttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaa 939  Q
    ||||||| |||||||||   ||||||||||||||||||||| | || |||||||  |||||||||||||||||  |||| ||| |||    |||||||||    
T  10822897 tttattcccatctccatgaaaactttattcccacccttttcctagggaaattttttctattcccaggaacattttatacccgggaattttttttagtaaa 10822798  T
Q  940 cttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||| || | |||||||    
T  10822797 cttgtaacaaacatagacatatacacttctatc 10822765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 670 - 755
Target Start/End: Original strand, 49216027 - 49216112
Alignment:
Q  670 gtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||| ||||||  |||| |||||| || ||||||  |||||||||| |||||||||| ||||||||||||||||||||||    
T  49216027 gtgtttgttttaagttttccaaaattattcttaggaataatgttccttggaatataaagatgggaattttattccaaggtatttag 49216112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 842 - 965
Target Start/End: Original strand, 18460829 - 18460956
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttctt-gggaaaatttt-ctattcccaggaacattatactcggaa--ataaaatttagta 937  Q
    |||||||| |||||||||    ||||||||| ||||| ||||||| ||||||||||| |||||||||| |||||| ||  |  ||  |||||||||||||    
T  18460829 aatttattttcatctccaagagaactttatttccaccattttctttgggaaaatttttctattcccagaaacattttataccaaagaataaaatttagta 18460928  T
Q  938 aacttgtaacaaacatagacatgtatat 965  Q
    |||||||||||||||||||||| |||||    
T  18460929 aacttgtaacaaacatagacatatatat 18460956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 671 - 755
Target Start/End: Complemental strand, 28124779 - 28124695
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||| ||||||||||  || || ||||||||||||||| ||||| |||  ||||||||||||||| ||||||    
T  28124779 tgtttgtttcaagtttaccaaatttatttttaggattaacattccttggaatataaatatgagaattttattccaaggaatttag 28124695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 971
Target Start/End: Complemental strand, 2565640 - 2565508
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttggg--aaaattttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    |||||| |||||||| ||| | ||||||||||||||| ||||||| ||  ||||||||||||||| || ||||  |||||| ||||||| |||||||  |    
T  2565640 aatttactctcatcttcatgggaactttattcccaccattttctttggaaaaaattttctattccaagaaacattttatacccggaaat-aaatttaaca 2565542  T
Q  938 aacttgtaacaaacatagacatgtatatttctat 971  Q
    ||||||||||||||| ||  || |||||||||||    
T  2565541 aacttgtaacaaacacaggtatatatatttctat 2565508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 667 - 754
Target Start/End: Complemental strand, 12228601 - 12228514
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||| |||||||||||||||||||| |  ||||||||||  ||| || |||||||||  |||||||||| ||||||||||    
T  12228601 ggtgtgtttgttacaagtttatcaaatttattcttgggaataacattatttgaaatataaagatgagaattttattctaaggtattta 12228514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 842 - 955
Target Start/End: Complemental strand, 20414646 - 20414529
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaa-aattttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | |||||||||||||||||||| ||||||||   |||| |||| ||| |||||  |||||| ||| ||||||||||||||    
T  20414646 aatttattcccatctccatgggaactttattcccacccttttccttgggaatttttttttatttccaagaacattttatacccgggaataaaatttagta 20414547  T
Q  938 aacttgtaacaaacatag 955  Q
    || || ||||||||||||    
T  20414546 aatttataacaaacatag 20414529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 773 - 954
Target Start/End: Original strand, 32071267 - 32071450
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||| |||||||||||   ||||||||| |||||   |  |||||| |||| ||||    ||||||||||||||||||| |||||||||||    
T  32071267 atgtttggttaactttataatattcctaggaaccataaaaataaagattataataggtaactacatacaaatttattctcatctccat-gtaactttatt 32071365  T
Q  873 cccacccttttcttgg-gaaaat-tttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacata 954  Q
    | | ||||||||||   |||||| |||||||| ||| |||||||  |||| |  ||||||||||||||||||||||||||||||||    
T  32071366 ctcgcccttttctttaagaaaatctttctatttccatgaacatttcataccca-aaataaaatttagtaaacttgtaacaaacata 32071450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 24574457 - 24574599
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacc-cttttcttgggaaa-attttctattcccaggaaca----------ttatactcggaaataaa 929  Q
    ||||||||||||||||||| | |||||||||||||||  |||||||||||||  ||||||||| |||| ||||          |||||| | | ||||||    
T  24574457 aatttattctcatctccatgggaactttattcccaccatttttcttgggaaattttttctatttccagaaacattttatcattttatacccaggaataaa 24574556  T
Q  930 atttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||| ||| || ||| |||||    
T  24574557 atttagtaaacttgtaacaaacataggcatatacattcctatc 24574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 677 - 752
Target Start/End: Original strand, 27093763 - 27093838
Alignment:
Q  677 tttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatt 752  Q
    ||||| ||||||||||||||||| ||| ||||| ||||||| ||| |||||||||  ||||||||| |||||||||    
T  27093763 tttcatgtttatcaaatttattcttaaaaataatattccttagaatataaagatgtgaattttatttcaaggtatt 27093838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 672 - 754
Target Start/End: Original strand, 18460582 - 18460664
Alignment:
Q  672 gtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||||||| ||| ||||||||||  | | || |||||||||  ||||| ||| |||||||||||    
T  18460582 gtttgtttcaagtttatcaaatttatttctacgaataacatttttcgaaatataaagatgagaatttgattacaaggtattta 18460664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 842 - 934
Target Start/End: Original strand, 19533034 - 19533130
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttggg--aaaattttctattcccaggaaca--ttatactcggaaataaaattta 934  Q
    ||||||||| ||||||||  | ||||||||||||||||||||| | ||  |||| ||||||||||||||||||  |||||| ||| |||||||||||    
T  19533034 aatttattcccatctccaaggaaactttattcccacccttttccttggaaaaaaatttctattcccaggaacattttatacccgggaataaaattta 19533130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 894 - 972
Target Start/End: Complemental strand, 1247029 - 1246949
Alignment:
Q  894 ttttctattcccaggaacattatactc--ggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||| ||||||||||| || ||  || |||||||||||||||||||||||||||||||  ||| | ||||||||||    
T  1247029 ttttctattaccaggaacattttattcttgggaataaaatttagtaaacttgtaacaaacataagcatatgtatttctatc 1246949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 924 - 961
Target Start/End: Complemental strand, 6832051 - 6832014
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6832051 aataaaatttagtaaacttgtaacaaacatagacatgt 6832014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 671 - 755
Target Start/End: Complemental strand, 21925864 - 21925780
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||| ||||||||||  ||  | ||| ||||||  |||||||||||| |||||||||||  |||||||||||    
T  21925864 tgtttgtttcaagtttaccaaatttatttttagaagtaagattcctcagaacataaagatcgaaattttattataaggtatttag 21925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 972
Target Start/End: Original strand, 26085691 - 26085741
Alignment:
Q  923 aaataaaatttagtaaacttgt-aacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  26085691 aaataaaatttagtaaacttgtaaaaaaacatagtcatgtatatttctatc 26085741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 934 - 972
Target Start/End: Complemental strand, 26849240 - 26849202
Alignment:
Q  934 agtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  26849240 agtaaacttgtaacaaacatagacatatatatttctatc 26849202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 972
Target Start/End: Complemental strand, 28139816 - 28139767
Alignment:
Q  923 aaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||| ||| |||||||||||||||  ||||||||||||||||    
T  28139816 aaataaaatttactaatcttgtaacaaacataagcatgtatatttctatc 28139767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 664 - 749
Target Start/End: Complemental strand, 28693781 - 28693696
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggt 749  Q
    ||||||||||||||||||| ||||  |||||||||||||  |||||  ||||||| ||| | ||||||  ||||||||| ||||||    
T  28693781 aagggtgtgtttgtttcaaatttactaaatttattcctagaaataattttccttgaaactttaagatgagaattttatttcaaggt 28693696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 752
Target Start/End: Complemental strand, 33650357 - 33650276
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatt 752  Q
    ||||||||||||||||| ||||||||||  || ||||||||||  ||| ||  ||||||||  |||||||||| ||||||||    
T  33650357 tgtttgtttcaagtttaccaaatttatttttatgaataacattatttgaaatctaaagatgagaattttattctaaggtatt 33650276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 664 - 700
Target Start/End: Original strand, 19532910 - 19532946
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcc 700  Q
    |||||||||||||||||||||||| ||||||||||||    
T  19532910 aagggtgtgtttgtttcaagtttaccaaatttattcc 19532946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 816
Target Start/End: Complemental strand, 33650265 - 33650222
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaatag 816  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||    
T  33650265 atgtttgcttaacattataatattctcggaaaccataaaaatag 33650222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 1e-56; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 489 - 665
Target Start/End: Complemental strand, 40567704 - 40567528
Alignment:
Q  489 gagcaatacaaccatattgattaacacaccggtttatttcgttgttgatttcaaagtcaataaatcaacattggctttaaactaccaagacaattgtaag 588  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| || | |||||||||| ||||||||     
T  40567704 gagcaatacaaccatattgattaaaacaccgatttatatcgttgttgatttcaaagtcaataaatcaacattgggttcatactaccaagataattgtaac 40567605  T
Q  589 gatccagctctgattaataataatgatgtgaattagagactttaaataaaggatgagataagattttagataataaa 665  Q
    ||||||||||||||||||||||||  |||||||||||||||  | |||||||||||||||| |||||| ||| ||||    
T  40567604 gatccagctctgattaataataattgtgtgaattagagactccatataaaggatgagataaaattttatatagtaaa 40567528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 45693910 - 45694212
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||| ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||| ||||              
T  45693910 aaggatgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaacataaagatgagaattttattccaaggcattt---------- 45693999  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgt 863  Q
             |||||||||||||||||||||||||  |||||||||| |||||||||  |||||    |||||| |   |||||||| |||||||||| |     
T  45694000 taaaaaaaaatgtttgcttaacattataatattcctgggaaccataaaaataggaattataattgcaaattactcatgaatttattttcatctccatggg 45694099  T
Q  864 aactttattcccacccttttc-ttgggaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||| ||  |||| ||| ||||||||||||||||||||||||||||||||||||    
T  45694100 aactttattcccacccttttccttgggaaaaattttctattcccatgaacgttttatacccgggaataaaatttagtaaacttgtaacaaacatagacat 45694199  T
Q  960 gtatatttctatc 972  Q
    || |||| |||||    
T  45694200 gtgtattcctatc 45694212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 668 - 972
Target Start/End: Complemental strand, 28312042 - 28311744
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||||||||||                
T  28312042 gtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaat----- 28311948  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
         ||||||| ||||| |||||||||||   ||||||||  ||||||| |  |||||| |||| ||      ||||||||| ||||||||  | ||||    
T  28311947 -----atgtttggttaactttataatattcctaggaaccatgaaaatagggattataataggtaactatttatgaatttattcccatctccacgggaact 28311853  T
Q  868 ttattcccacccttttc-ttgggaaa-attttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||  |||| ||| ||||||||| |||||||||||||||||||||| ||| |||    
T  28311852 ttattcccacccttttccttgggaaagattttctattcccaggaacattttatacccgggaataaaattcagtaaacttgtaacaaacataggcatatat 28311753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 668 - 972
Target Start/End: Original strand, 37233155 - 37233453
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||                
T  37233155 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaat----- 37233249  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
         ||||||| ||||| |||||||||||   ||||||||  ||||| | |  |||||| |||| ||      ||||||||| ||||||||| | ||||    
T  37233250 -----atgtttggttaactttataatattcctaggaaccatgaaaataaggattataataggtaactatttatgaatttattcccatctccatgggaact 37233344  T
Q  868 ttattcccaccctttt-cttgggaa-aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||| ||| |||    
T  37233345 ttattcccacccttttccttgggaacgattttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatat 37233444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 346694 - 346392
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||             
T  346694 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat-- 346597  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |     
T  346596 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 346505  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||||| |||||||||||||||||||| |||    
T  346504 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcat 346405  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  346404 atacattcctatc 346392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 664 - 955
Target Start/End: Original strand, 2050587 - 2050873
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  2050587 aagggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat- 2050685  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatg-taattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   |||| |||| |||||||||  |||||| |  |||||      ||||||||| ||||||||| |    
T  2050686 ---------atgtttggttagctttataatattcctaggaatcataaaaataggaattataataggaaaattatttatgaatttattcccatctccatgg 2050776  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||    
T  2050777 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 2050873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 6171513 - 6171815
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||             
T  6171513 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat-- 6171610  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |     
T  6171611 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 6171702  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||| |||| |||||||||  |||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||| |||    
T  6171703 aactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcat 6171802  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  6171803 atacattcctatc 6171815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 664 - 955
Target Start/End: Original strand, 4559280 - 4559566
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  4559280 aagggtgtgtttgtttcaagtttaccaaatttatttctaagaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat- 4559378  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  4559379 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 4559469  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||  ||||||||||||||||||||||    
T  4559470 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaataaagtaaacttgtaacaaacatag 4559566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 773 - 972
Target Start/End: Original strand, 1988132 - 1988335
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||| |||||||||||   ||||||| | ||||||| |  |||||| |||| || |  | ||||||||||||||||||| | |||||||||    
T  1988132 atgtttggttaactttataatattccttggaaccaaaaaaatagggattataataggtaactatataagaatttattctcatctccatggaaactttatt 1988231  T
Q  873 cccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttc 968  Q
    |||||||||||| ||| ||||||||| ||||||||| |||||||  |||  ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  1988232 cccacccttttccttgagaaaatttttctattcccaagaacattttatatccggaaataaaatttaataaacttgtaacaaacataggcatgtatatttc 1988331  T
Q  969 tatc 972  Q
    ||||    
T  1988332 tatc 1988335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 11071327 - 11071629
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||| || |||||||||| ||||||||||||||| ||||||             
T  11071327 agggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaat-- 11071424  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgt 863  Q
            ||||||| ||||| |||||||||||   ||||||||| ||||| | |  |||||| ||||       || ||||||||| ||||| ||| |     
T  11071425 --------atgtttggttaactttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattcccatcttcatggg 11071516  T
Q  864 aactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||||||||||  |||| ||| |||||||||||||||||||||||||||||||| |||    
T  11071517 aactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcat 11071616  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  11071617 atacattcctatc 11071629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 665 - 963
Target Start/End: Original strand, 40569740 - 40570035
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||| | ||| |||||||||||||||||||||||             
T  40569740 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatatatatatgtaaattttattccaaggtatttag--------- 40569830  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
           |||||||| ||||||||||||| |||   ||||||  | ||||||| |  |||||| ||||||| ||   | ||||||| ||| ||||| | |    
T  40569831 -aaaaaagatgtttggttaacattataatgttccaaggaacctcaaaaatagggattataataggtaattatacatgattttattcccatttccatggga 40569929  T
Q  865 a---ctttattcccacccttttctt--gggaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagac 957  Q
    |   ||||||||||||| |||||||  || |||||||||||||||||||||||  |||||| ||| |||||||||||  ||||||||||||||||||| |    
T  40569930 acttctttattcccaccattttctttgggaaaaattttctattcccaggaacattttatacccgggaataaaatttaacaaacttgtaacaaacataggc 40570029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 666 - 972
Target Start/End: Complemental strand, 20426830 - 20426530
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||| ||||||||              
T  20426830 gggtgtgtttgtttaaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatttcaatgtatttagaaaaaat--- 20426734  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaa 865  Q
           ||||||| ||||| |||||||||||     ||||||| ||||||  |  |||||| |||| ||      ||||||||||||||||||| | ||    
T  20426733 -------atgtttggttaactttataatattcctaccaaccataaaaatagagattataataggtaactatttatgaatttattctcatctccataggaa 20426641  T
Q  866 ctttattcccacccttttc-ttgggaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||||||||  |||  |||  ||||||||||||||||||||||||||||||| ||| |    
T  20426640 ctttattctcacccttttccttgggaaaaattttctattcccaggaacattttatatccggggataaaatttagtaaacttgtaacaaacataggcatat 20426541  T
Q  962 atatttctatc 972  Q
    | ||| |||||    
T  20426540 aaattcctatc 20426530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 14777847 - 14777757
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  14777847 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 14777757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 664 - 955
Target Start/End: Complemental strand, 42675011 - 42674725
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||| |||||||| | ||||||||||||||| ||||||            
T  42675011 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttcttggaatataaagataggaattttattccaaggaatttaggaaaaat- 42674913  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||| ||||| |    
T  42674912 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatttccatgg 42674822  T
Q  863 taactttattcccaccc-ttttcttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||| |||||||||||||  |||||||||||||||||||  |||| | ||| ||||||||||||||||||||||||||||||||    
T  42674821 gaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatgcccgggaataaaatttagtaaacttgtaacaaacatag 42674725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 668 - 954
Target Start/End: Original strand, 3902182 - 3902462
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||||||||||| || |||||||  || ||||||||||||||| || |||||||||| |||||||||||||| |||||||                
T  3902182 gtgtgtttgtttcaagtttaccatatttatttttaggaataacattccttgaaatataaagatgggaattttattccaagatatttagaaaaaat----- 3902276  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
         ||||||| ||||| ||||||||||||| ||||||||| ||||||| |  |||||| |||| || |    ||||||||||||||||||  | ||||    
T  3902277 -----atgtttggttaactttataatattcacaggaaccataaaaatagggattataataggtaactatatatgaatttattctcatctccaagggaact 3902371  T
Q  868 ttattcccacccttttcttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacata 954  Q
    ||||||||||| ||||||| || ||   |||||||||||||||||||  ||| ||  |  |||||||||||||||||||||||||||||||    
T  3902372 ttattcccaccattttctttgggaatttttttctattcccaggaacattttaaacctgagaataaaatttagtaaacttgtaacaaacata 3902462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 667 - 959
Target Start/End: Original strand, 17965707 - 17965994
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||               
T  17965707 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat---- 17965802  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgtaa 865  Q
          ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| |||||| || | ||    
T  17965803 ------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctctatgggaa 17965896  T
Q  866 ctttattcccaccc-ttttcttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||| ||||| |||||||  ||||||||||| |||||||  |||||| ||| |||||||||| |||||||||||||||||||||||||    
T  17965897 ctttattcccaccctttttcatgggaaattttttctattcctaggaacattttatacccgggaataaaatttggtaaacttgtaacaaacatagacat 17965994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 37192243 - 37192546
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||            
T  37192243 aagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat- 37192341  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      |||||||||  |||||||| |    
T  37192342 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattccaatctccatgg 37192432  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| |||| |||||||||||||||||||||||    
T  37192433 aaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttaataaacttgtaacaaacatagaca 37192532  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  37192533 tatacatttctatc 37192546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 37533675 - 37533976
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    |||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||| | |||||||| ||||||||||||||| ||||||             
T  37533675 agggtgtgtttgtttcaagtttactaaatttatttctaggaataacattccttggaataaaaagatgggaattttattccaaggaatttaggaaaatt-- 37533772  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgt 863  Q
            ||||||| ||| | ||||| |||||  |||||||||| ||||||| |  |||||| |||| |     || ||||||||| ||||||||| |     
T  37533773 --------atgtttggttagctttata-tattcctgggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatctccatggg 37533863  T
Q  864 aactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| || || |||||||  ||||||| |||||||||  |||| | | ||||||||||||||||||||||||||||||||||||    
T  37533864 aactttattcccacccttttttttgggaaattttttctattccaaggaacattttatacccaggaataaaatttagtaaacttgtaacaaacatagacat 37533963  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  37533964 atacattcctatc 37533976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 41729479 - 41729389
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  41729479 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 41729389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 668 - 972
Target Start/End: Original strand, 14832536 - 14832834
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||  || |||||||||  ||||||||||| || |||||||                
T  14832536 gtgtgtttgtttcaagtttaccaaatttatttccaagaataacattccttaaaatataaagatgataattttattcctagatatttagaaaaaat----- 14832630  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
         ||||||| ||| | |||||||||||    |||||||| ||||| | |  |||||| | ||||||     |||||||||||||||| ||   ||||    
T  14832631 -----atgtttggttagctttataatattcctatgaaccataaaaataaggattataataggaaattacgtataaatttattctcatctcaatgagaact 14832725  T
Q  868 ttattcccacccttttctt-gggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||||  ||||  || ||||||||||||||||||| |||||||||||| ||| |||    
T  14832726 ttattcccacccttttctttgggaaaatttttctattcccaagaacattttatacctgggaataaaatttagtaaacttttaacaaacataggcatatat 14832825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 666 - 754
Target Start/End: Complemental strand, 5770458 - 5770370
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| | ||||||||||||||| |||||    
T  5770458 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagataggaattttattccaaggaattta 5770370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 842 - 955
Target Start/End: Complemental strand, 41729311 - 41729194
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||   || ||||||||||||||    
T  41729311 aatttattctcatctccatggaaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatatctggcaataaaatttagta 41729212  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  41729211 aacttgtaacaaacatag 41729194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 665 - 742
Target Start/End: Original strand, 23943885 - 23943962
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttatt 742  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  23943885 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 23943962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 14253412 - 14253546
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||| |||   || ||||||| |||||||||||| |  |||||||  |||||||||  ||||||  |||||||| ||||||||||||||    
T  14253412 aatttattctcatcttcatgaaaattttattcacacccttttctttgagaaattttttctattcccataaacattttatactcgggaataaaatttagta 14253511  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| ||||||||||||    
T  14253512 aacttgtaacaaacatagacatatatatttctatc 14253546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 667 - 755
Target Start/End: Original strand, 39819414 - 39819502
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||| |||| ||||||||||| || ||||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  39819414 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacattctttggaatataaagatggaaattttattcccaggtatttag 39819502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 667 - 754
Target Start/End: Original strand, 638318 - 638405
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||| || ||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  638318 ggtgtgtttgatttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 638405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 5770291 - 5770157
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||| ||| | ||||||||||||||| |||| ||||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  5770291 aatttattcccatcttcatgggaactttattcccaccatttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 5770192  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  5770191 aacttgtaacaaacataggcatatacattcctatc 5770157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 668 - 755
Target Start/End: Original strand, 13760692 - 13760779
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||  |||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  13760692 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 13760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 673 - 959
Target Start/End: Complemental strand, 27358303 - 27358023
Alignment:
Q  673 tttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnnnnng 772  Q
    ||||||| ||||||| |||||||||||||| ||||||||||  |||||| |||||||||  ||||||||| ||||||||||||                     
T  27358303 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttatttcaaggtatttagcaaaaat---------- 27358214  T
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||  |||||||||||   ||||||||| ||||| | |  |||||| |||| ||      |||||||||||||||| || | |||||||||    
T  27358213 atgtttgattaaatttataatattcctaggaaccataaaaataaggattataataggtaactatttatgaatttattctcatctctatgggaactttatt 27358114  T
Q  873 cccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||| ||||| ||||||| ||||||||| ||| |||  ||||  || ||||||||||||||||||||||||||||||||||||    
T  27358113 cccacccttttccttgggtaaatttttctattcccatgaatattttatacctgggaataaaatttagtaaacttgtaacaaacatagacat 27358023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 41750419 - 41750553
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  41750419 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 41750518  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  41750519 aacttgtaacaaacataggcatatacatttctatc 41750553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 638484 - 638617
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaattttc-tattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    |||||||||||||||||||   |||||||||||| || ||| ||||||||| ||||  |||||| |||||||||  |||| |||||||||||||||||||    
T  638484 aatttattctcatctccatgagaactttattccccccttttccttgggaaattttttatattcctaggaacattttatacccggaaataaaatttagtaa 638583  T
Q  939 acttgtaacaaacatagacatgtatatttctatc 972  Q
    || |||||||||||||||||| || ||| |||||    
T  638584 acctgtaacaaacatagacatatacattcctatc 638617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 2521565 - 2521682
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | || |||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| | | ||||||||||||||    
T  2521565 aatttattcccatctccataggaattttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccaggaataaaatttagta 2521664  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  2521665 aacttgtaacaaacatag 2521682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 842 - 955
Target Start/End: Complemental strand, 14777679 - 14777562
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | || |||||||||||| ||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  14777679 aatttattcccatctccataggaattttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 14777580  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  14777579 aacttgtaacaaacatag 14777562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 664 - 754
Target Start/End: Complemental strand, 21737758 - 21737668
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||| |||| ||||||||||||||| |||||    
T  21737758 aaggatgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaattta 21737668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 40951208 - 40951118
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||| |||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| | ||||||    
T  40951208 agggtatgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaatataaagatgaaaattttattccaaagaatttag 40951118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 670 - 755
Target Start/End: Complemental strand, 9734190 - 9734105
Alignment:
Q  670 gtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||| ||||||| |||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  9734190 gtgtttgttttaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 9734105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 18714005 - 18713704
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    |||||||||||| |||||| ||| ||||||||||  || |||||||||||||||||| |||||||||  ||| |||||||||| |||||||             
T  18714005 agggtgtgtttgattcaagcttaccaaatttatttataggaataacattccttggaatataaagatgagaatattattccaagatatttagaaaaaat-- 18713908  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
            ||||||| ||||| |||||||||||    |||||||| |||||||    |||||| || | |||     ||||||||  ||||||||| | |    
T  18713907 --------atgtttggttaactttataatattcctatgaaccataaaaatagggtttataataggttactacgtataaatttatttccatctccatggga 18713816  T
Q  865 actttattcccacccttttcttgggaaaattttct--attcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
    |||||||||||||||||||||| || ||||||| |  ||| ||| |||||||  |||| ||| |||||||||||||||||||||||||||||||| |||     
T  18713815 actttattcccacccttttctttgggaaattttttttattaccaagaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcata 18713716  T
Q  961 tatatttctatc 972  Q
    ||||||| ||||    
T  18713715 tatatttatatc 18713704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 40951040 - 40950906
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaattttct--attcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| | ||||| |||| |  |||||||||||||||  ||||   | |||||| |||||||    
T  40951040 aatttattctcatctccatgggaactttattcccacccttttccttggaaatttttttgtattcccaggaacattttataccaaggaataaattttagta 40950941  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||  ||| ||||||||||||    
T  40950940 aacttgtaacaaacataagcatatatatttctatc 40950906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 9734027 - 9733893
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaattttct-attcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| | |||||||||||||||  ||||   | |||||| |||||||    
T  9734027 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttttattcccaggaacattttataccaaggaataaattttagta 9733928  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  9733927 aacttgtaacaaacataggcatatacatttctatc 9733893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 667 - 972
Target Start/End: Complemental strand, 5003182 - 5002884
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||| || |||| ||||||||||  || |||||||||||||||||| |||||||||  |||||||||||||||||||| |               
T  5003182 ggtgtgtttgtttaaaatttaccaaatttatttataggaataacattccttggaatataaagatgcgaattttattccaaggtatttgg----------a 5003093  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaac 866  Q
         |||||||| |||||||| |||||||  | ||||||||| ||||| | |  |||||| ||| ||||||   |||| ||||  |||| ||| | |||    
T  5003092 taaaagatgtttggttaacattttaatattttcaggaaccataaaaatatggattataataggtagttacacatgaattgattcatatcttcatggaaac 5002993  T
Q  867 tttattcccacccttttcttgggaa--aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    |||||||||||| | ||||| ||||    |||||||||||||| ||||  ||||||| || |||||||||||| |||||||||||||| |||  ||||||    
T  5002992 tttattcccaccatattctttggaattttttttctattcccagaaacattttatacttgg-aataaaatttagcaaacttgtaacaaatatatgcatgta 5002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 669 - 747
Target Start/End: Original strand, 26309993 - 26310071
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaag 747  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||||||| ||||||||| ||||    
T  26309993 tgtgtttgtttcaagtttaccaaatttattcctaggaatagcattccttggaatataaagatgggaattttattacaag 26310071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 673 - 886
Target Start/End: Original strand, 4875506 - 4875710
Alignment:
Q  673 tttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnnnnng 772  Q
    |||||||||||||| |||||||||||| || |||||| |||| |||||| |||||||||  ||||||||||||| ||||||||                     
T  4875506 tttgtttcaagtttgtcaaatttattcttaggaataatattctttggaatataaagatgtgaattttattccaatgtatttagaaaaaaat--------- 4875596  T
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    |||||| |||||||||||||||| |   ||||||||| ||||||| |  ||||||||||||||||    ||||||||||||||| ||| | |||||||||    
T  4875597 atgttttcttaacattataatatgccgaggaaccataaaaatagggattataatatgtaattacatatgaatttattctcatcttcatgggaactttatt 4875696  T
Q  873 cccacccttttctt 886  Q
    ||||||| ||||||    
T  4875697 cccacccgtttctt 4875710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 842 - 950
Target Start/End: Original strand, 23944053 - 23944165
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| ||| |||| |||| |||||||||||||||||  |||  ||  ||||||||||||||    
T  23944053 aatttattctcatctccatgggaactttattcccacccttttcgttgagaaattttttctattcccaggaacattttatatccgagaataaaatttagta 23944152  T
Q  938 aacttgtaacaaa 950  Q
    |||||||||||||    
T  23944153 aacttgtaacaaa 23944165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 864 - 972
Target Start/End: Complemental strand, 34356859 - 34356747
Alignment:
Q  864 aactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||| ||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||||||| || |||||||||||||    
T  34356859 aactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttataccaaacatagacat 34356760  T
Q  960 gtatatttctatc 972  Q
     || |||||||||    
T  34356759 atacatttctatc 34356747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 673 - 972
Target Start/End: Original strand, 45408981 - 45409274
Alignment:
Q  673 tttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnnnnng 772  Q
    ||||||| ||||||| |||||||||||||| ||||||||||  |||||| |||||||||  ||||||||||||||||||||||                     
T  45408981 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttattccaaggtatttagcaaaaat---------- 45409070  T
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||  ||||||||||    ||||||||| ||||| | |  |||||| |||| ||      ||||||||  ||||||||| | |||||||||    
T  45409071 atgtttgattaaatttataatatttctaggaaccataaaaataaggattataataggtaactatttatgaatttatttccatctccatgggaactttatt 45409170  T
Q  873 cccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttc 968  Q
    |||||||||||| ||||| ||||||| ||||||||| ||| |||  |||| ||| ||||||||||||||||||||||| |||||||| ||| || ||| |    
T  45409171 cccacccttttccttgggtaaatttttctattcccatgaatattttatacccggtaataaaatttagtaaacttgtaaaaaacataggcatatacattcc 45409270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 671 - 754
Target Start/End: Original strand, 13790018 - 13790101
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||| || ||| ||||| ||||||||||| ||||||||||    
T  13790018 tgtttgtttcaagtttatcaaatttatttgtaggaataacattccttgaaatatatagatgtaaattttattctaaggtattta 13790101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 677 - 751
Target Start/End: Complemental strand, 11763737 - 11763663
Alignment:
Q  677 tttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtat 751  Q
    ||||||||||| ||||||||||| || |||||||||||||||||| |||||||||  ||||||||||||||||||    
T  11763737 tttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtat 11763663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 40567817 - 40567760
Alignment:
Q  367 agcctcaaatcatccaatatcaaacaaaaacataaacataatgacaacattaaagaat 424  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  40567817 agcctcaaattatccaatatcaaacaaaaacacaaacataatgacaacattaaagaat 40567760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 21737589 - 21737447
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca----------ttatactcggaaataaa 929  Q
    ||||||||| ||||||||| | ||||||||||||||| |||| |||||||||  |||||||||||||||||||          |||||| | | ||||||    
T  21737589 aatttattcccatctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatacccaggaataaa 21737490  T
Q  930 atttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||||||| || ||| |||||    
T  21737489 atttagtaaacttgtaacaaacatagacatatacattcctatc 21737447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 26310157 - 26310293
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||| || |||||||  |||||||||||||||||  ||||   | |||||| |||| ||    
T  26310157 aatttattcccatctccatgggaactttattcccacccttttctttgggaaattttttctattcccaggaacattttataccaaggaataaattttaata 26310256  T
Q  938 aacttgtaacaaac--atagacatgtatatttctatc 972  Q
    ||||| ||||||||  |||||||| || |||||||||    
T  26310257 aacttctaacaaacatatagacatatacatttctatc 26310293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 894 - 959
Target Start/End: Original strand, 25454968 - 25455035
Alignment:
Q  894 ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||||  |||||||  ||| ||||||||||||||||||||||||||||||||    
T  25454968 ttttctattcccaggaacattttatactcgagaatgaaatttagtaaacttgtaacaaacatagacat 25455035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 704 - 755
Target Start/End: Original strand, 2521436 - 2521487
Alignment:
Q  704 gaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  2521436 gaataacattccttggaatataaagatggaaattttattccaaggaatttag 2521487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 11763552 - 11763418
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc--ttgggaaaattttctattcccaggaacattatac-tcgga-aataaaatttagta 937  Q
    ||||||||||||||| ||| | ||||||||||||||| |||||  |||| ||  |||||||||||||| || ||| ||  || || ||||||||||||||    
T  11763552 aatttattctcatcttcatggaaactttattcccacctttttcctttggaaattttttctattcccagaaatattttatgtccgagaataaaatttagta 11763453  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    || || |||||||||||||||| |||||| |||||    
T  11763452 aatttataacaaacatagacatatatattcctatc 11763418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 39995320 - 39995178
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca----------ttatactcggaaataaa 929  Q
    ||||||||||||||||||| | ||||||||||||||| |||| |||||||||  |||||||||||||||||||          |||||  | | ||||||    
T  39995320 aatttattctcatctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatatccaggaataaa 39995221  T
Q  930 atttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||| ||| || ||| |||||    
T  39995220 atttagtaaacttgtaacaaacataggcatatacattcctatc 39995178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 669 - 755
Target Start/End: Complemental strand, 3254437 - 3254351
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||| ||||||| ||||||||||  || ||||||||||| |||||| ||||| |||  |||||||||| |||||||||||    
T  3254437 tgtgtttgttttaagtttaccaaatttatttttaggaataacattctttggaatataaaaatgagaattttattctaaggtatttag 3254351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 7007307 - 7007397
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||| ||||||| ||||||||||  || |||||||||| |||| || |||||||||  |||||||||| || ||||||||    
T  7007307 agggtgtgtttgttttaagtttaccaaatttattattaggaataacatttcttgaaatataaagatgagaattttattctaaagtatttag 7007397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 673 - 726
Target Start/End: Original strand, 2521381 - 2521434
Alignment:
Q  673 tttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataa 726  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  2521381 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataa 2521434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 690 - 755
Target Start/End: Original strand, 41750276 - 41750341
Alignment:
Q  690 aaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||| ||||||||||||||| || |||||||||| ||||||||| ||||| ||||||    
T  41750276 aaatttattcctaggaataacattccttgaaatataaagatgggaattttatttcaaggaatttag 41750341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 913 - 972
Target Start/End: Original strand, 4685144 - 4685203
Alignment:
Q  913 ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||| ||||||||||||| |||| || ||||||||||| |||||||||||||||||    
T  4685144 ttatactctgaaataaaatttaataaatttataacaaacataaacatgtatatttctatc 4685203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 864 - 955
Target Start/End: Original strand, 39819605 - 39819703
Alignment:
Q  864 aactttattcccacccttttcttgggaaaattttct--attcccaggaacattat-----actcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    ||||||||||||||| ||||||| ||||| |||| |  |||||||||||||||||     || ||| ||| ||||||||||||||||||||||||||||    
T  39819605 aactttattcccaccattttctttggaaatttttttcaattcccaggaacattattatatacccgggaatgaaatttagtaaacttgtaacaaacatag 39819703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 669 - 747
Target Start/End: Original strand, 1623078 - 1623156
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaag 747  Q
    |||||||||||||| ||||  |||||||||||||  ||||||||| ||||||| |||||||||  ||||||||| ||||    
T  1623078 tgtgtttgtttcaattttactaaatttattcctagtaataacatttcttggaatataaagatgagaattttatttcaag 1623156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 867 - 972
Target Start/End: Original strand, 6571602 - 6571711
Alignment:
Q  867 tttattcccaccctttt-cttgggaaaattttc-tattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    |||||||| |||||||| ||||||||| ||||  ||||||| ||||||||  ||||  |  |||||||||||||||||||||||||||||||| ||| ||    
T  6571602 tttattcctaccctttttcttgggaaattttttatattccccggaacattttatacctgagaataaaatttagtaaacttgtaacaaacataggcatata 6571701  T
Q  963 tatttctatc 972  Q
    |||| |||||    
T  6571702 tattcctatc 6571711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 823 - 955
Target Start/End: Original strand, 25724896 - 25725033
Alignment:
Q  823 taatatgtaattacacgataatttattctcatctccattgtaactttattcccacccttttcttgggaaaa--ttttctattcccaggaaca--ttatac 918  Q
    ||||| ||| |||||| | || |||||||||||| |||   ||||||||||||||||||||||| || |||  |||||||||||||| ||||  ||||||    
T  25724896 taataggtagttacactagaaattattctcatcttcatgagaactttattcccacccttttctttgggaaactttttctattcccagaaacattttatac 25724995  T
Q  919 tcggaaataaaa-tttagtaaacttgtaacaaacatag 955  Q
     | | ||||||| |||| ||||| || |||||||||||    
T  25724996 ccagcaataaaattttaataaacctgcaacaaacatag 25725033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 842 - 940
Target Start/End: Complemental strand, 3254245 - 3254142
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttggg---aaaattttctattcccaggaacattat--actcggaaataaaatttagt 936  Q
    ||||||||||||||| ||| | ||||||||||||||| ||| ||| ||   |||||||||||||||||| |||||| |  || ||  |||||||||||||    
T  3254245 aatttattctcatcttcatgggaactttattcccaccatttcctttgggaaaaaattttctattcccagaaacattttgtacgcgagaataaaatttagt 3254146  T
Q  937 aaac 940  Q
    ||||    
T  3254145 aaac 3254142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 842 - 906
Target Start/End: Original strand, 13760857 - 13760923
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattccca 906  Q
    ||||||||| ||||||||| | |||||||||||||||||||| |||||||||  |||||||||||||    
T  13760857 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattccca 13760923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 772 - 972
Target Start/End: Original strand, 37851677 - 37851882
Alignment:
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttat 871  Q
    |||||||  ||||||||||||||||    |||| |||| ||||| |||  |||||| ||| ||||||   ||||||||||||||| ||| | ||||||||    
T  37851677 gatgtttagttaacattataatatttttaggaatcataaaaatatgaattataataggtagttacacatgaatttattctcatcttcatgggaactttat 37851776  T
Q  872 tcccacccttttcttgggaa----aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatat 965  Q
    || |||| ||||||| ||||      ||||||||||| || ||||  |||||| || |||||||| ||||||||||| || ||||||||   | ||||||    
T  37851777 tctcaccattttctttggaattttttttttctattcctagaaacattttatacccgaaaataaaa-ttagtaaacttctagcaaacataagaaggtatat 37851875  T
Q  966 ttctatc 972  Q
    |||||||    
T  37851876 ttctatc 37851882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 773 - 886
Target Start/End: Original strand, 7007405 - 7007518
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||| |||||||||||    |||||||  ||||||| |  |||||| |||| ||||    ||||||||||||||||||| |||| ||||||    
T  7007405 atgtttggttaactttataatattcctaagaaccattaaaatagggagtataataggtaactacatatgaatttattctcatctccatggtaattttatt 7007504  T
Q  873 cccacccttttctt 886  Q
    |||||| |||||||    
T  7007505 cccaccattttctt 7007518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 772 - 976
Target Start/End: Original strand, 13539488 - 13539696
Alignment:
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttat 871  Q
    |||||||||||||||||||| ||||| | | ||||||| ||||| | |  ||||||  |||||||||   ||| ||||| ||| | ||| | ||||||||    
T  13539488 gatgtttgcttaacattatagtattctcagaaaccataaaaataaggattataatagataattacacatgaatctattcccatgttcatgggaactttat 13539587  T
Q  872 tcccacccttttct-tgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatattt 967  Q
    ||||||   ||||| || |||| |||| | |||||||  ||||||  ||||  |  ||||||||||| |||| |||||||||||||||||||| |||| |    
T  13539588 tcccactagtttctgtgagaaattttttccattcccataaacattttatacctgcgaataaaatttaataaatttgtaacaaacatagacatgcatatgt 13539687  T
Q  968 ctatcgttt 976  Q
    |||| ||||    
T  13539688 ctattgttt 13539696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 673 - 742
Target Start/End: Complemental strand, 41298255 - 41298186
Alignment:
Q  673 tttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttatt 742  Q
    ||||||| |||| |||||||||||||  || ||||||||||| |||||| |||||||||  |||||||||    
T  41298255 tttgttttaagtatatcaaatttatttttaggaataacattcattggaatataaagatgagaattttatt 41298186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 924 - 968
Target Start/End: Complemental strand, 1723323 - 1723279
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttc 968  Q
    ||||||||||| |||||||||||||||||| || |||||||||||    
T  1723323 aataaaatttaataaacttgtaacaaacattgaaatgtatatttc 1723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 971
Target Start/End: Original strand, 1623273 - 1623405
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaattttctatt--cccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||| | ||||| |||||||||||| || | ||||| |||||| ||||| |   | ||||||||||  |||  ||| ||| ||||||| ||    
T  1623273 aatttattctcatattcattgaaactttattcccgccatgttctttggaaaaatttctctgtactcaggaacattttataaccgggaatcaaatttaata 1623372  T
Q  938 aacttgtaacaaacatagacatgtatatttctat 971  Q
    |||| ||||||| ||||||||| |||||||||||    
T  1623373 aactcgtaacaa-catagacatatatatttctat 1623405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 883
Target Start/End: Original strand, 13790110 - 13790221
Alignment:
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaat--tacacgataatttattctcatctccattgtaacttt 869  Q
    |||||||| |||||||||||||||||   |||||| || ||||||| |  |||||| |||||  |||| |||  ||||||| ||||||||| | ||||||    
T  13790110 gatgtttgattaacattataatattccaaggaaccttaaaaatagggattataataggtaatattacatgat--tttattcccatctccatgggaacttt 13790207  T
Q  870 attcccaccctttt 883  Q
    ||||||||| ||||    
T  13790208 attcccaccgtttt 13790221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 671 - 721
Target Start/End: Original strand, 25724753 - 25724803
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaa 721  Q
    |||||||||||||||||  | ||||||||| ||||||||| ||||||||||    
T  25724753 tgtttgtttcaagtttactagatttattcccaagaataactttccttggaa 25724803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 755
Target Start/End: Original strand, 4684945 - 4684994
Alignment:
Q  706 ataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||| || |||||||||||||  ||||||||||| ||||||||||    
T  4684945 ataacattctttagaacataaagatgagaattttattcctaggtatttag 4684994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 972
Target Start/End: Original strand, 4875750 - 4875799
Alignment:
Q  923 aaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||| |||||||||||||||||| |||  | ||||||||||    
T  4875750 aaataaaatttagcaaacttgtaacaaacataaacaaatttatttctatc 4875799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 14403555 - 14403463
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacat--aaagatggaaattttattccaaggtatttag 755  Q
    |||||| |||||||| ||||||||||||||||||  ||  ||||||| | |||| || ||  ||||||||||||||||| | ||||| |||||    
T  14403555 agggtgagtttgttttaagtttatcaaatttatttttagaaataacagttcttgaaatataaaaagatggaaattttatactaaggtttttag 14403463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 924 - 972
Target Start/End: Original strand, 24499418 - 24499464
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||||| ||||||||||||  || ||||||||||||    
T  24499418 aataaaatttagtaaacttataacaaacatag--atatatatttctatc 24499464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 665 - 742
Target Start/End: Original strand, 25444922 - 25444999
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttatt 742  Q
    ||||||||| ||||| |||||| |||||||||||   | ||||||||||  |||||| |||||||||  |||||||||    
T  25444922 agggtgtgtatgttttaagtttgtcaaatttattttaaggaataacattttttggaatataaagatgataattttatt 25444999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 924 - 969
Target Start/End: Original strand, 45693103 - 45693148
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttct 969  Q
    ||||||||||| |||| |||||||||||||||| ||| ||||||||    
T  45693103 aataaaatttaataaatttgtaacaaacatagaaatgaatatttct 45693148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 106; Significance: 2e-52; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 664 - 967
Target Start/End: Complemental strand, 3915 - 3617
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||  | |||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||            
T  3915 aagggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtatttaggaaaaaaa 3816  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataattt-attctcatctccattg 862  Q
             ||||||  |||||||||||||||||   |||||| || ||||||| |  |||||| |||||||||| ||||||| ||| |||||||||| |    
T  3815 ---------atgtttcgttaacattataatattccaaggaaccttaaaaatagggaatataataggtaattacac-ataattttattttcatctccatgg 3726  T
Q  863 taactttattcccacccttttcttgg-gaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     ||||||||||||||| ||||||| | ||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||    
T  3725 gaactttattcccaccattttctttgagaaaacttttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacataggca 3626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 104; Significance: 3e-51; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 664 - 967
Target Start/End: Original strand, 4187 - 4487
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||  | |||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||            
T  4187 aagggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtatttaggaaaaaaa 4286  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataa--tttattctcatctccatt 861  Q
             ||||||  |||||||||||||||||   |||||| || ||||||| |  |||||| |||||||||| || |  |||||| ||||||||||     
T  4287 ---------atgtttcgttaacattataatattccaaggaaccttaaaaatagggaatataataggtaattacactattaattttattttcatctccatg 4377  T
Q  862 gtaactttattcccacccttttcttgg-gaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagac 957  Q
    | ||||||||||||||| ||||||| | ||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| |    
T  4378 ggaactttattcccaccattttctttgagaaaacttttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacataggc 4477  T
Q  958 atgtatattt 967  Q
    || |||||||    
T  4478 atatatattt 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 1e-47; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 664 - 955
Target Start/End: Complemental strand, 45265398 - 45265112
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  45265398 aagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat- 45265300  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||||||||||||| |    
T  45265299 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgg 45265209  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||    
T  45265208 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccggaaataaaatttagtaaacttataacaaacatag 45265112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 666 - 955
Target Start/End: Complemental strand, 35488537 - 35488253
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||              
T  35488537 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat--- 35488441  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgta 864  Q
           ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| | |    
T  35488440 -------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatagga 35488348  T
Q  865 actttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||    
T  35488347 actttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 35488253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 664 - 972
Target Start/End: Complemental strand, 9947341 - 9947037
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| || |||||||||| ||||||||||||||| || |||            
T  9947341 aagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgtaatataaagatgggaattttattccaaggaatgtagaaaaaaat 9947242  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattg 862  Q
             ||||||| ||| | ||||||||||||  ||||||||| ||||||| |   ||||| ||||       || |||||| |||||||||||| |    
T  9947241 ---------atgtttggttagctttataatattcataggaaccataaaaatagggattgtaataggtaaactatttatgaatttaatctcatctccatgg 9947151  T
Q  863 taactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| |||||||||||||||||||||||||||||||| ||    
T  9947150 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggca 9947051  T
Q  959 tgtatatttctatc 972  Q
    | || ||| |||||    
T  9947050 tatacattcctatc 9947037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 11329714 - 11330017
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||            
T  11329714 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat- 11329812  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  11329813 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 11329903  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||   | |||||| ||||||||||||||||||||||||| ||    
T  11329904 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggca 11330003  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  11330004 tatacatttctatc 11330017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 44565767 - 44565857
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  44565767 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaaggaatttag 44565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 669 - 972
Target Start/End: Original strand, 45045352 - 45045650
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnn 768  Q
    ||||||||||||||||||| ||||||||||| || |||||| ||||||||||| |||||||||| ||||||||||||||| ||||||                 
T  45045352 tgtgtttgtttcaagtttaccaaatttattcttaggaataatattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat------ 45045445  T
Q  769 nnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaact 867  Q
        ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| | ||||    
T  45045446 ----atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaact 45045541  T
Q  868 ttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||||| ||| ||     
T  45045542 ttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccggaaataaaatttaataaacttgtaacaaacataggcatatac 45045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 43948966 - 43949269
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  43948966 aagggtgtatttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat- 43949064  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||| ||| |    
T  43949065 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatcttcatgg 43949155  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||||||| |||||||||  ||||||||| |||||||||  |||||||  | |||||| ||||||||||||||||||||||||| ||    
T  43949156 gaactttattcccacccttttccttgggaaattttttctatttccaggaacattttatactaaggaataaattttagtaaacttgtaacaaacataggca 43949255  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  43949256 tatacatttctatc 43949269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 665 - 976
Target Start/End: Complemental strand, 5543479 - 5543174
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||| ||||  ||| ||||||||||||  ||||||||| ||||||||||||             
T  5543479 agggtgtgtttgttttaagtttaccaaatttatttctaagaatatcattatttgaaacataaagatgagaattttatt-caaggtatttag--------- 5543390  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
           |||||||||||||||||||||| ||| ||||||||||| ||||| | |  |||||| ||||||||||   ||||| ||| ||||| ||| | |    
T  5543389 -aaaaaagatgtttgcttaacattataatgttcccgggaaccataaaaatatggattataataggtaattacacatgaatttgttcccatcttcatggga 5543291  T
Q  865 actttattcccac-ccttttctt--gggaaaattttctattcccaggaa--cattatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||   |||||||  || |||| |||||||||||| |||    ||||||  |  ||||||||||||||||||||||||||||||| ||||    
T  5543290 actttattcccactatttttctttgggaaaaaatttctattcccaagaaagttttatacgagagaataaaatttagtaaacttgtaacaaacataaacat 5543191  T
Q  960 gtatatttctatcgttt 976  Q
    |||||||| ||||||||    
T  5543190 gtatatttatatcgttt 5543174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 664 - 754
Target Start/End: Original strand, 33378555 - 33378645
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  33378555 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 33378645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 773 - 972
Target Start/End: Complemental strand, 41684272 - 41684069
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||  |||||||||| |  ||||||||| ||||||  |  |||||| |||| ||||    |||||||| ||||||||||   |||||||||    
T  41684272 atgtttggttaattttataatatttataggaaccataaaaatagagattataataggtaactacatataaatttattttcatctccatgagaactttatt 41684173  T
Q  873 cccacccttttcttggg--aaaattttctattcccaggaacat--tatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttc 968  Q
    ||||| |||||||| ||  ||||||||||||||||| ||||||  ||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  41684172 cccactcttttctttgggcaaaattttctattcccaagaacatcttatatccggaaataaaatttagtaaacttgtaacaaacataaacatatatatttc 41684073  T
Q  969 tatc 972  Q
    ||||    
T  41684072 tatc 41684069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 48341086 - 48341386
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||| |||||              
T  48341086 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaga-gggaattttattccaaggaattta---------- 48341174  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |     
T  48341175 tgaaaaatatgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 48341274  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||| |||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||||| |||||||||||||||||||| |||    
T  48341275 aactttattcccaccattttccttgggaaattttttctattcccaggaacattttatac-cgggaataaaatttaataaacttgtaacaaacataggcat 48341373  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  48341374 atacattcctatc 48341386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 666 - 754
Target Start/End: Complemental strand, 27214203 - 27214115
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  27214203 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 27214115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 669 - 963
Target Start/End: Complemental strand, 30686336 - 30686048
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnn 768  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||| ||||||||||||                 
T  30686336 tgtgtttgttttaagtttatcaaatttatttctaggaataacattccttggaatataaagatgaaaattttattgcaaggtatttaggaaaaat------ 30686243  T
Q  769 nnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactt 868  Q
        ||||||| ||||| |||||||||||   ||||||||| ||||||  |  |||||| |||| ||      ||||||||| ||||||| | | |||||    
T  30686242 ----atgtttggttaactttataatattcctaggaaccataaaaatagcgattataataagtaactatttatgaatttattcccatctccctaggaactt 30686147  T
Q  869 tattcccacccttttcttgggaa--aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    |||||||||| ||||| | ||||    ||||||||||||| |||||  |||||| ||| |||||||||||||||||||||||||||||||  |||||||    
T  30686146 tattcccacctttttccttggaattttttttctattcccatgaacattttatacccgggaataaaatttagtaaacttgtaacaaacatatgcatgtat 30686048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 25045798 - 25045664
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| ||  ||||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  25045798 aatttattcccatctccatgggaactttattcccacccttttccttacgaaaatttttctattcccaggaacattttatactcgggaataaaatttagta 25045699  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||  ||| |||||| |||||    
T  25045698 aacttgtaacaaacatatgcatatatattcctatc 25045664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 25924987 - 25924896
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||||||    
T  25924987 aagggtgtgtttgtttcatgtttaccaaatttattcctaagaataacattccttggaatataaagatgagaattttattccaaggaatttag 25924896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 667 - 754
Target Start/End: Complemental strand, 34930814 - 34930727
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  34930814 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 34930727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 669 - 963
Target Start/End: Complemental strand, 37534447 - 37534159
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnn 768  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||||||| |||||||||  ||||||||| ||||||||||||                 
T  37534447 tgtgtttgtttcaagtttatcaaatttatttctagaaataacattccttggaatataaagatgagaattttatttcaaggtatttaggaaaaat------ 37534354  T
Q  769 nnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactt 868  Q
        ||||||| ||||| |||||||||||   ||||| |||  |||||| |  |||||| |||| ||      ||||||||| ||||||||| | |||||    
T  37534353 ----atgtttggttaactttataatattcttaggaactataataatagggattataataagtaactatttatgaatttattcacatctccatgggaactt 37534258  T
Q  869 tattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    ||||||||||||||| |||||||||  |||||||||||||  || |  |||||| ||||||||||| |||||||||||||||||||||||  |||||||    
T  37534257 tattcccacccttttccttgggaaattttttctattcccataaatattttatacccggaaataaaagttagtaaacttgtaacaaacatatgcatgtat 37534159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 44565935 - 44566069
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||||||  |||||||||||||| ||||  |||||| ||| ||||||||||| ||    
T  44565935 aatttattctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttatacccgggaataaaatttaata 44566034  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || ||| |||||    
T  44566035 aacttgtaacaaacatagacatatacattcctatc 44566069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 842 - 953
Target Start/End: Original strand, 25097959 - 25098074
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| || ||||| |||| |||||||||||||||||  |||| ||||||||||||||||||    
T  25097959 aatttattcccatctccatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccggaaataaaatttagta 25098058  T
Q  938 aacttgtaacaaacat 953  Q
    ||||||||||||||||    
T  25098059 aacttgtaacaaacat 25098074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 666 - 754
Target Start/End: Complemental strand, 48160921 - 48160833
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  48160921 gggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 48160833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 27214036 - 27213902
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  27214036 aatttattctcatctccataggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 27213937  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  27213936 aacttgtaacaaacataggcatatacatttctatc 27213902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 27248014 - 27248105
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||||| ||||||    
T  27248014 aaggatgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttattccaaggaatttag 27248105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 28904536 - 28904445
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  |||||||||| |||| ||||||    
T  28904536 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttag 28904445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 45448832 - 45448966
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| | |||| || | |||||||||||||||||||| ||||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  45448832 aatttattcccctctctatgggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 45448931  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || ||| |||||    
T  45448932 aacttgtaacaaacatagacatctacattcctatc 45448966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 666 - 743
Target Start/End: Original strand, 45448665 - 45448742
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattc 743  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  45448665 gggtgtgtttgtttcaagtttaccaaatttattcctatgaataacattccttggaatataaagatgggaattttattc 45448742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 25924818 - 25924684
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    |||||||||||||||| || | ||||||||||||||||||||| |||| |||||||  |||||||||||||||||  ||||   | |||||| |||||||    
T  25924818 aatttattctcatctctatgggaactttattcccacccttttcctggggaaattttttctattcccaggaacattttatacaaaggaataaattttagta 25924719  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  25924718 aacttgtaacaaacataggcatatacatttctatc 25924684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 952
Target Start/End: Complemental strand, 9814395 - 9814281
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| |||||||||   |||||||||||||||||||| ||||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  9814395 aatttattcccatctccatgagaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 9814296  T
Q  938 aacttgtaacaaaca 952  Q
    |||||||||||||||    
T  9814295 aacttgtaacaaaca 9814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 16825535 - 16825401
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  16825535 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 16825436  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  16825435 aacttgtaacaaacataggcatatacatttctatc 16825401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 773 - 972
Target Start/End: Complemental strand, 22156430 - 22156226
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| |||||| ||||||||||||| |||||||| ||||| | |  ||||||||||||||||    || ||||||||||||| ||   |||||||||    
T  22156430 atgtttgtttaacagtataatattcacgagaaccataaaaatatggattataatatgtaattacatatgaacttattctcatctctatgagaactttatt 22156331  T
Q  873 cccacccttttcttgggaaaa---ttttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatattt 967  Q
    || ||||||||||| || |||   ||||||||||||||||||   |||||| ||| | ||||||||| |||||||||||||||  |||| ||| ||| ||    
T  22156330 cctacccttttctttgggaaatttttttctattcccaggaacgttttatacgcgggattaaaatttattaaacttgtaacaaatctagatatgcataatt 22156231  T
Q  968 ctatc 972  Q
    |||||    
T  22156230 ctatc 22156226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 773 - 972
Target Start/End: Complemental strand, 22212345 - 22212141
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| |||||| ||||||||||||| |||||||| ||||| | |  ||||||||||||||||    || ||||||||||||| ||   |||||||||    
T  22212345 atgtttgtttaacagtataatattcacgagaaccataaaaatatggattataatatgtaattacatatgaacttattctcatctctatgagaactttatt 22212246  T
Q  873 cccacccttttcttgggaaaa---ttttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatattt 967  Q
    || ||||||||||| || |||   ||||||||||||||||||   |||||| ||| | ||||||||| |||||||||||||||  |||| ||| ||| ||    
T  22212245 cctacccttttctttgggaaatttttttctattcccaggaacgttttatacgcgggattaaaatttattaaacttgtaacaaatctagatatgcataatt 22212146  T
Q  968 ctatc 972  Q
    |||||    
T  22212145 ctatc 22212141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 27419405 - 27419271
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  27419405 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 27419306  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  27419305 aacttgtaacaaacataggcatatacatttctatc 27419271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 40212779 - 40212913
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| |||||||||   |||||||||||||||||||| ||||||||| |||| |||||||||||||||||  |||| | | ||||||||||||||    
T  40212779 aatttattcccatctccatgagaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttataccccggaataaaatttagta 40212878  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  40212879 aacttgtaacaaacataggcatatacattcctatc 40212913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 48313843 - 48313934
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||||||  |||||||||| |||| ||||||    
T  48313843 aagggtgtgtttgtttcaagtttatcaaatttatttctaggaataacatttcttggaatataaagatgagaattttattctaaggaatttag 48313934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 11000592 - 11000709
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttctt-gggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||| | ||| | ||||||||||||||||||||||| ||||||||||| ||||||||| ||| |||  |||| ||| ||||||||||||||    
T  11000592 aatttattctcatatgcatgggaactttattcccacccttttctttgggaaaatttttctattcccaagaatattttatacccgggaataaaatttagta 11000691  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  11000692 aacttgtaacaaacatag 11000709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 27248183 - 27248300
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | |||||||||||||||||||| |||||||||  |||||||||||||| ||||  ||||||  || ||||||||||||||    
T  27248183 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccagtaacattttatacctgggaataaaatttagta 27248282  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  27248283 aacttgtaacaaacatag 27248300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 671 - 755
Target Start/End: Original strand, 18823890 - 18823974
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||  |||||||||| |||||||||||    
T  18823890 tgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattctaaggtatttag 18823974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 671 - 755
Target Start/End: Original strand, 39553910 - 39553994
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||| ||||||||||||||||||| ||  ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  39553910 tgtttgtttgaagtttatcaaatttattcttagtaataacattccttggaatataaagatgggaattttattccaaggaatttag 39553994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 17276509 - 17276418
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||| ||||  ||||||||| ||| |||||||||||||||||| ||| ||||| ||||||||||||||| |||||||    
T  17276509 aagggtgtgtttgtttcaattttacaaaatttatttctaggaataacattccttggaatatatagatgtaaattttattccaagatatttag 17276418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 38396547 - 38396413
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||| | | ||||||||||||||| ||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  38396547 aatttattcccatctccgtgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 38396448  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||| || ||||||||||||| || ||| |||||    
T  38396447 aacttataccaaacatagacatatacattcctatc 38396413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 39554073 - 39554207
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||| ||||||||||  ||||   | |||||| |||||||    
T  39554073 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattctcaggaacattttataccaaggaataaattttagta 39554172  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  39554173 aacttgtaacaaacataggcatatacatttctatc 39554207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 864 - 966
Target Start/End: Original strand, 45723061 - 45723167
Alignment:
Q  864 aactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||| |||||||  |||||||| ||||||||||||||||||||| |||||||||| |||    
T  45723061 aactttattcccaccatttttcttgggaaaatttttctattcccaagaacattttatactcgggaataaaatttagtaaacttgtgacaaacataggcat 45723160  T
Q  960 gtatatt 966  Q
     ||||||    
T  45723161 atatatt 45723167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 842 - 955
Target Start/End: Complemental strand, 8419770 - 8419653
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||  || ||||||||  ||||    
T  8419770 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacctgggaataaaataaagta 8419671  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  8419670 aacttgtaacaaacatag 8419653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 842 - 967
Target Start/End: Original strand, 18824036 - 18824164
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||  ||||||  |||| ||| |||||||||||||     
T  18824036 aatttattcccatctccatgg-aactttattcccacctttttccttgggaaaatttttctattcccaaaaacattttatacccgggaataaaatttagtg 18824134  T
Q  938 aacttgtaacaaacatagacatgtatattt 967  Q
    |||||||||||||||||| ||| |||||||    
T  18824135 aacttgtaacaaacataggcatatatattt 18824164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 31922076 - 31921983
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatgg--aaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||||||||||||||| | | ||||||||||| |||||| ||||| ||||   ||||||||||||||||||||||    
T  31922076 aagggtgtgtttgtttcaagtttatcaaatttattaccatgaataacattctttggaatataaatatgggagaattttattccaaggtatttag 31921983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 665 - 754
Target Start/End: Complemental strand, 38396714 - 38396626
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| || ||||| | ||||||||||||||| |||||    
T  38396714 agggtgtgtttgtttcaagtttatcaaatttattcctaggaatagcattcattggaatat-aagataggaattttattccaaggaattta 38396626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 667 - 755
Target Start/End: Complemental strand, 27419571 - 27419483
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||| ||||||||||  || |||||||||| ||||||| |||||||||| ||||||||||||| | ||||||    
T  27419571 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacatttcttggaatataaagatgggaattttattccaaagaatttag 27419483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 34930648 - 34930513
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | |||||||||||||||||||| ||||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  34930648 aatttattcccatctccatgggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 34930549  T
Q  938 aacttgtaac-aaacatagacatgtatatttctatc 972  Q
    |||||||||| |||||||| ||| || |||||||||    
T  34930548 aacttgtaacaaaacataggcatatacatttctatc 34930513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 844 - 966
Target Start/End: Complemental strand, 6656650 - 6656525
Alignment:
Q  844 tttattctcatctccattgtaactttattcccacccttttc-ttgggaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaaa 939  Q
    ||||||| ||||||||| | |||||||||||||   ||||| ||||||||| |||||||||||||| ||||||  ||||||| ||||||| |||||||||    
T  6656650 tttattcccatctccatgggaactttattcccatatttttcattgggaaaacttttctattcccagaaacattttatactcgaaaataaa-tttagtaaa 6656552  T
Q  940 cttgtaacaaacatagacatgtatatt 966  Q
    |||||||||||||||| ||| ||||||    
T  6656551 cttgtaacaaacataggcatatatatt 6656525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 38544084 - 38544218
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacc-cttttcttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | |||||||||||||||  |||||||| ||||  |||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  38544084 aatttattctcatctccatgggaactttattcccaccatttttcttgagaaattttttctattcccagaaacattttatacccgggaataaaatttagta 38544183  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||| ||||| |||||||| ||| || ||| |||||    
T  38544184 aacctgtaataaacataggcatatacattcctatc 38544218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 41632545 - 41632411
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||| ||||||| | |||||||  ||||   | |||||| |||||||    
T  41632545 aatttattctcatctccatgggaactttattcccaccctttttcttgggaaattttttctattcctaagaacattttataccaaggaataaattttagta 41632446  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||| |||||||| ||| || |||||||||    
T  41632445 aacttgtaataaacataggcatatacatttctatc 41632411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 41632709 - 41632623
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||| |||||||||||     ||||||||||||| ||| |||||||||| ||||||||||||||| ||||||    
T  41632709 aagggtgtgtttgtttcaagtttaccaaatttattc-----aataacattcctttgaatataaagatgggaattttattccaaggaatttag 41632623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 48314012 - 48314146
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||| ||||| |||||||| |||| |||||||||| ||||||  |||  ||| ||||||||||||||    
T  48314012 aatttattcccatctccatgggaactttattcccaccattttccttgggaaattttttctattcccagaaacattttatatccgggaataaaatttagta 48314111  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||| |||||||||||| ||| || ||| |||||    
T  48314112 aacttctaacaaacataggcatatacattcctatc 48314146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 923 - 972
Target Start/End: Complemental strand, 10902746 - 10902697
Alignment:
Q  923 aaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10902746 aaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 10902697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 664 - 745
Target Start/End: Original strand, 45722880 - 45722961
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattcca 745  Q
    |||||||| ||| ||||||||||| ||||||||||  || ||||||||||||||| || |||||||||||||||||||||||    
T  45722880 aagggtgtctttatttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatggaaattttattcca 45722961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 773 - 955
Target Start/End: Complemental strand, 43446133 - 43445947
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataattt-attctcatctccattgtaactttat 871  Q
    ||||||| |||||||||||||||||    ||||  || | |||||||  |||||| |||||||||| ||||||| ||||||||||||||   ||||||||    
T  43446133 atgtttggttaacattataatattctaaagaacattaaagataggaaatataataggtaattacac-ataattttattctcatctccatgagaactttat 43446035  T
Q  872 tcccacccttttc-ttgggaaaa-ttttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    ||||||| ||||| ||||||||| |||| ||||| || |||||  ||||| |||  ||||||||||||||||||| ||||||| ||||    
T  43446034 tcccaccattttctttgggaaaacttttttattctcatgaacattttatattcgagaataaaatttagtaaacttataacaaatatag 43445947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 772 - 963
Target Start/End: Original strand, 45440727 - 45440922
Alignment:
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttat 871  Q
    |||||||| |||||||||||||||||   | |||| || || |||| |  |||||| ||||||| ||   | ||| ||| |||||||||   ||||||||    
T  45440727 gatgtttgattaacattataatattccaagtaaccttaaaactagggattataataggtaattatacatgatttttttcccatctccatgagaactttat 45440826  T
Q  872 tcccacccttttctt-gggaaaattttc-tattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    ||||||   |||||| |||||||||||  |||||| |||||||||  |||||||| |||||||||||||||||||||||||||||||  |||||||    
T  45440827 tcccactactttctttgggaaaatttttatattccgaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacatatgcatgtat 45440922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 664 - 717
Target Start/End: Complemental strand, 16916235 - 16916182
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattcctt 717  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  16916235 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 16916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 670 - 755
Target Start/End: Original strand, 44819981 - 44820066
Alignment:
Q  670 gtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||| ||||||||||  || ||||||||||||||  || |||||||||  ||||||||||||||| ||||||    
T  44819981 gtgtttgtttcaagtttaccaaatttatttttaggaataacattccttaaaatataaagatgagaattttattccaaggaatttag 44820066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 28904367 - 28904233
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||  |   ||| ||||  |||||||||| ||||||  ||||   | |||||| |||||||    
T  28904367 aatttattcccatctccatgggaactttattcccaccctttttcttataaatttttttctattcccagaaacattttataccaaggaataaattttagta 28904268  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || |||||||||    
T  28904267 aacttgtaacaaacatagacatatacatttctatc 28904233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 33378724 - 33378866
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca----------ttatactcggaaataaa 929  Q
    ||||||||| ||||||||| | ||||||||||||||| |||| |||||||||  |||||||||||||||||||          |||||| | | ||||||    
T  33378724 aatttattcccatctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatacccaggaataaa 33378823  T
Q  930 atttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||| ||| || ||| |||||    
T  33378824 atttagtaaacttgtaacaaacataggcatatacattcctatc 33378866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 670 - 747
Target Start/End: Original strand, 38543920 - 38543998
Alignment:
Q  670 gtgtttgtttcaa-gtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaag 747  Q
    ||||||||||||| |||||  |||||||||| || |||||||||||||||||| |||||||||  ||||||||||||||    
T  38543920 gtgtttgtttcaaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaag 38543998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 669 - 754
Target Start/End: Original strand, 31598449 - 31598534
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||| ||||||| ||||||||||  |  |||||||||| ||||||| |||||||| | ||||||||| |||||||||||    
T  31598449 tgtgtttgttttaagtttaccaaatttatttttgggaataacatttcttggaatataaagataggaattttatttcaaggtattta 31598534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 844 - 955
Target Start/End: Complemental strand, 6656402 - 6656288
Alignment:
Q  844 tttattctcatctccattgtaactttattcccacccttttc-ttgggaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaaa 939  Q
    ||||||| ||||||||| | ||||||||| ||||||||||  ||||||||| ||||||||| |||| || |||  ||||||| ||||||| |||||||||    
T  6656402 tttattcccatctccatggaaactttatttccaccctttttattgggaaaacttttctatttccagaaatattttatactcgaaaataaa-tttagtaaa 6656304  T
Q  940 cttgtaacaaacatag 955  Q
    ||| ||||||||||||    
T  6656303 cttataacaaacatag 6656288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 666 - 753
Target Start/End: Complemental strand, 6656819 - 6656731
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataa-cattccttggaacataaagatggaaattttattccaaggtattt 753  Q
    |||||||||| |||||||||||  |||||||||| || |||||| |||||||||||| | ||| |||  ||||||||||||||||||||    
T  6656819 gggtgtgtttctttcaagtttactaaatttattcttaggaataaacattccttggaatagaaatatgagaattttattccaaggtattt 6656731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 842 - 935
Target Start/End: Complemental strand, 31921908 - 31921811
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttag 935  Q
    |||||||||||||||| || | ||||||||||||||||||||||| |||||   |||||||||||||  ||||  |||||||| | ||||||||||||    
T  31921908 aatttattctcatctctatgggaactttattcccacccttttctttggaaatttttttctattcccacaaacattttatactcaggaataaaatttag 31921811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 671 - 755
Target Start/End: Original strand, 25097796 - 25097881
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataaca-ttccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||| ||||||| |||||||||||||| |||||| | ||  |||||| |||||||||  ||||||||||||||| ||||||    
T  25097796 tgtttgttttaagtttaccaaatttattcctaggaataatatttttttggaatataaagatgagaattttattccaaggaatttag 25097881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 924 - 972
Target Start/End: Complemental strand, 48160686 - 48160638
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||    
T  48160686 aataaaatttagtaaacttgtaacaaacatagacatatacattcctatc 48160638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 704 - 755
Target Start/End: Complemental strand, 8419899 - 8419848
Alignment:
Q  704 gaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||| |||||||||| ||||||||||||||  ||||||    
T  8419899 gaataacattccttggaatataaagatgggaattttattccaagaaatttag 8419848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 672 - 755
Target Start/End: Complemental strand, 22156520 - 22156437
Alignment:
Q  672 gtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||| |||||||||||||||  || ||||||||||  |||||| ||||||||   |||||||||| ||||||| |||    
T  22156520 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatatag 22156437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 672 - 755
Target Start/End: Complemental strand, 22212435 - 22212352
Alignment:
Q  672 gtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||| |||||||||||||||  || ||||||||||  |||||| ||||||||   |||||||||| ||||||| |||    
T  22212435 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatatag 22212352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 665 - 708
Target Start/End: Original strand, 40212626 - 40212669
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaata 708  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  40212626 agggtgtgtttgtttcaagtttaccaaatttattcctaggaata 40212669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 667 - 754
Target Start/End: Complemental strand, 40385974 - 40385887
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||| | |||||||| |||||||||||||| ||  |||||||||  |||||| |||||||||  |||||||||  ||||||||||    
T  40385974 ggtgtgtctctttcaagtgtatcaaatttattcttagtaataacattttttggaatataaagatgagaattttattttaaggtattta 40385887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 842 - 952
Target Start/End: Original strand, 44820144 - 44820258
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| || |||| |||||||||  ||||   | |||||| |||| ||    
T  44820144 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctgttccgaggaacattttataccaaggaataaattttaata 44820243  T
Q  938 aacttgtaacaaaca 952  Q
    ||| |||||||||||    
T  44820244 aacatgtaacaaaca 44820258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 924 - 971
Target Start/End: Complemental strand, 47246161 - 47246114
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctat 971  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||    
T  47246161 aataaaattcagtaaacttgtaacaaacatagaaatatatatttctat 47246114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 972
Target Start/End: Original strand, 30871163 - 30871212
Alignment:
Q  923 aaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||| ||| ||||||||||||||||||| | |||||||||||||||    
T  30871163 aaataaaacttaataaacttgtaacaaacataaaaatgtatatttctatc 30871212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 924 - 976
Target Start/End: Original strand, 31598653 - 31598705
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcgttt 976  Q
    ||||||||||||||||||||||||||| |||  ||| | ||||||||||||||    
T  31598653 aataaaatttagtaaacttgtaacaaatataagcatttgtatttctatcgttt 31598705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 754
Target Start/End: Original strand, 45440637 - 45440720
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||| ||||| ||||||||||| ||  ||||||||| ||| ||| |||  |||| ||||||||||||||| ||||||    
T  45440637 gtgtgtttgtttca-gtttaccaaatttattcatagtaataacatttcttagaatata--gatgtaaattttattccaagatattta 45440720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 666 - 755
Target Start/End: Complemental strand, 43446229 - 43446140
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||| ||||||||| |||| || |||||| ||| ||| ||||||||||  | |||| |||||||| | |||||||||  |||||||||||    
T  43446229 gggtttgtttgtttaaagtgtaccaaattgatttctatgaataacatttatcggaatataaagataggaattttattttaaggtatttag 43446140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 842 - 910
Target Start/End: Complemental strand, 48160754 - 48160685
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaattttctattcccaggaa 910  Q
    ||||||||| ||||||||| | ||||||||||||||| |||| ||||| ||  |||||| ||||||||||    
T  48160754 aatttattcccatctccatgggaactttattcccaccattttccttggaaattttttctcttcccaggaa 48160685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 1e-47; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 681 - 966
Target Start/End: Complemental strand, 35348858 - 35348579
Alignment:
Q  681 aagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnnnnngatgtttgc 780  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||  |||||||  ||                 ||||||      
T  35348858 aagtttatcaaatttattcttaagaataacattcattggaacataaagatgagaattttattttaaggtatacagaaaaaaaaa--------atgttttt 35348767  T
Q  781 ttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttattcccaccct 880  Q
    ||||||||||||||||| ||||||||||| ||||| |||  |||||| ||||||||| |  ||||||||||||||| ||| | |||||||||||||||||    
T  35348766 ttaacattataatattcccgggaaccataaaaatatgaattataataggtaattacatgtgaatttattctcatcttcatgggaactttattcccaccct 35348667  T
Q  881 tttc-ttgggaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatt 966  Q
    |||| ||||||||||||||||||||||  ||||  |||||| |  ||||| ||||||||||||||||||||||||||||||||||||||    
T  35348666 tttctttgggaaaattttctattcccaaaaacattttatac-ccaaaatacaatttagtaaacttgtaacaaacatagacatgtatatt 35348579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 665 - 959
Target Start/End: Complemental strand, 29543364 - 29543075
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||             
T  29543364 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaat-- 29543267  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||||||||||||| |     
T  29543266 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatggg 29543175  T
Q  864 aactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||    
T  29543174 aactttattcccaccctttttcatgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacat 29543075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 6091436 - 6091739
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||            
T  6091436 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat- 6091534  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| |||||||||  |||||| || |||||      ||||||||||||||||||| |    
T  6091535 ---------atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaattatttatgaatttattctcatctccatgg 6091625  T
Q  863 taactttattcccaccctttt-cttgggaaaa-ttttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||| ||||| |||||||||| ||||||||||||| |||||  ||||||   | |||||| ||||||||||||||||||||||||| ||    
T  6091626 gaactttattcccactcttttccttgggaaaatttttctattcccaagaacattttataccaaggaataaattttagtaaacttgtaacaaacataggca 6091725  T
Q  959 tgtatatttctatc 972  Q
    | || |||| ||||    
T  6091726 tatacatttatatc 6091739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 668 - 972
Target Start/End: Complemental strand, 11856001 - 11855702
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||                
T  11856001 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat----- 11855907  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaac 866  Q
         ||||||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| | |||    
T  11855906 -----atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggaaac 11855812  T
Q  867 tttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||||||  |||  ||| |||||||||||||||||||||||||||||||| ||| ||    
T  11855811 tttattcccacccttttccttgggaaattttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacataggcatata 11855712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 18411931 - 18412233
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||             
T  18411931 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat-- 18412028  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||||||||||||| |     
T  18412029 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatggg 18412120  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||| |||| |||||||||  |||||||||||||||||||  |||||| ||  |||||||||||||||||||||||||||||||| |||    
T  18412121 aactttattcccacctttttccttgggaaattttttctattcccaggaacattttatacccgagaataaaatttagtaaacttgtaacaaacataggcat 18412220  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  18412221 atacattcctatc 18412233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 4765909 - 4765607
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  |||||||||| |||| ||||||             
T  4765909 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaat-- 4765812  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| |     
T  4765811 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 4765720  T
Q  864 aactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||| |||||||||||||||||||| |||    
T  4765719 aactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcat 4765620  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  4765619 atacattcctatc 4765607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 12970879 - 12970577
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||             
T  12970879 agggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat-- 12970782  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | ||||||||||||  ||||||||| ||||||| |   ||||| || || ||      ||||||||| ||||||||| |     
T  12970781 --------atgtttggttagctttataatattcataggaaccataaaaatagggattgtaataggtaaactatttatgaatttattcccatctccatgga 12970690  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| |||  ||||  |||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||| |||    
T  12970689 aactttattcccacccttttccttaagaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcat 12970590  T
Q  960 gtatatttctatc 972  Q
     || ||| |||||    
T  12970589 atacattcctatc 12970577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 664 - 955
Target Start/End: Complemental strand, 22936262 - 22935976
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  22936262 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat- 22936164  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  22936163 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 22936073  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||  || ||||||||  ||||||||||||||||||||||    
T  22936072 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacatag 22935976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 773 - 972
Target Start/End: Original strand, 20962411 - 20962614
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||||||||||||||||||||   |||||||||| |||||||||  |||||| | |||||| |  ||||||||||||||||||||   ||||||| |    
T  20962411 atgtttgcttaacattataatatttctgggaaccataaaaataggaattataataggaaattactcattaatttattctcatctccatgagaactttact 20962510  T
Q  873 cccaccctttt-cttggg-aaaattttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttc 968  Q
    ||||||||||| |||||| |||||||||||||||||| |||   |||||  ||  |||||||||||||||||||||||||||||||| || || |||| |    
T  20962511 cccacccttttccttgggaaaaattttctattcccagaaacgttttatatccgagaataaaatttagtaaacttgtaacaaacataggcacgtgtattcc 20962610  T
Q  969 tatc 972  Q
    ||||    
T  20962611 tatc 20962614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 668 - 972
Target Start/End: Original strand, 27481082 - 27481381
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||                
T  27481082 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat----- 27481176  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgtaac 866  Q
         ||||||| ||| | |||||||||||   ||||||||| ||||||  |  ||||||||| || ||      ||||||||||||||| ||| | |||    
T  27481177 -----atgtttggttagctttataatattcctaggaaccataaaaatagagattataatatgtaaactatttatgaatttattctcatcttcatgggaac 27481271  T
Q  867 tttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    ||||||||||||||||| ||||||||| ||||| ||||| |||||| |  |||||| ||| |||||||||||||||||||||||||||||||| ||| ||    
T  27481272 tttattcccacccttttccttgggaaatattttttattctcaggaatattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatata 27481371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 8646572 - 8646438
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||  ||| ||||||||||||||    
T  8646572 aatttattctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataaccgggaataaaatttagta 8646473  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || ||| |||||    
T  8646472 aacttgtaacaaacatagacatatacattcctatc 8646438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 19065686 - 19065552
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||||||||||||||||||    
T  19065686 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccggaaataaaatttagta 19065587  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  19065586 aacttgtaacaaacataggcatatacattcctatc 19065552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 8406616 - 8406706
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  8406616 agggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 8406706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 491 - 596
Target Start/End: Original strand, 1263023 - 1263123
Alignment:
Q  491 gcaatacaaccatattgattaacacaccggtttatttcgttgttgatttcaaagtcaataaatcaacattggctttaaactaccaagacaattgtaagga 590  Q
    |||||||||||||||||||||||     ||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  1263023 gcaatacaaccatattgattaac-----ggtttatatggttgttgatttcaaagtcaataaatcaacattggcttcaaactaccaagacaattgtaacga 1263117  T
Q  591 tccagc 596  Q
    ||||||    
T  1263118 tccagc 1263123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 17251535 - 17251836
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| ||||||| |||| ||| | |||||| |||||||||||||||            
T  17251535 aagggtgtgtttgtttcaaatttaccaaatttattcctac-aataacatttcttggaatataaggataggaatttttttccaaggtatttagataaaaa- 17251632  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgt 863  Q
            |||||||| |||||||| |||||||| |  |||||||| ||||||| |  ||||||| || ||||||   |||||||| |||||| ||| |     
T  17251633 --------gatgtttggttaacattttaatattc-ctagaaccataaaaatagggattataatatatagttacacatgaatttattttcatcttcatgga 17251723  T
Q  864 aactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||| | ||||||| || |||||||  |||||  || |||||||  |||||||  |||||||||||||||| || ||||||||||| ||||    
T  17251724 aactttattcccatcattttctttgggaaattttttctattatcatgaacattttatactcgagaataaaatttagtaaaattataacaaacataaacat 17251823  T
Q  960 gtatatttctatc 972  Q
    |||||||||||||    
T  17251824 gtatatttctatc 17251836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 667 - 755
Target Start/End: Complemental strand, 556053 - 555965
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  556053 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 555965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 663 - 972
Target Start/End: Original strand, 32535657 - 32535961
Alignment:
Q  663 aaagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnn 762  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| ||||||| ||||||| ||||||           
T  32535657 aaagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttaatccaaggaatttaggaaaaat 32535756  T
Q  763 nnnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccatt 861  Q
              ||||||| ||| | ||||||||||| | ||||||||| |||||||    |||||| || || ||      ||||||||| |||||||||     
T  32535757 ----------atgtttggttagctttataatattctcaggaaccataaaaataggggttataataggtaaactatttatgaatttattcccatctccatg 32535846  T
Q  862 gtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagac 957  Q
    | |||||||||||||||||||| ||| |||||  |||||||||||||  ||||  ||||||   |||||||| |||||||||||||||||||||||| ||    
T  32535847 ggaactttattcccacccttttccttaggaaattttttctattcccaataacattttataccaagaaataaattttagtaaacttgtaacaaacataaac 32535946  T
Q  958 atgtatatttctatc 972  Q
    || || |||||||||    
T  32535947 atatacatttctatc 32535961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 36703764 - 36703898
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  36703764 aatttattctcatctccataggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 36703863  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || |||||||||    
T  36703864 aacttgtaacaaacatagacatatacatttctatc 36703898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 669 - 755
Target Start/End: Complemental strand, 19065850 - 19065764
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  19065850 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 19065764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 26637370 - 26637280
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||| ||||||||||||||||||||||  || |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  26637370 agggtgtgtttatttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggtatttag 26637280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 665 - 972
Target Start/End: Complemental strand, 14207170 - 14206868
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||||| |||||||||  ||||||||| ||||| ||||||             
T  14207170 agggtgtgtttgtttcaagtttacaaaatttattcctaggaataacattcattggaatataaagatgagaattttatttcaaggaatttaggaaaaat-- 14207073  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgt 863  Q
            ||||||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||| ||||||||| |     
T  14207072 --------atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 14206981  T
Q  864 aactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||| ||||||  ||||   | |||||| ||||||||||||||||||||||||| |||    
T  14206980 aactttattcccacccttttccttgggaaattttttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcat 14206881  T
Q  960 gtatatttctatc 972  Q
     || |||||||||    
T  14206880 atacatttctatc 14206868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 664 - 955
Target Start/End: Original strand, 28602277 - 28602562
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| ||||||||||  || |||||||||||||||||| |||||||| | ||||||||||||||| ||||||            
T  28602277 aagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagataggaattttattccaaggaatttaggaaaaat- 28602375  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  28602376 ---------atgtttggttagctttataatattcctaggaaccatacaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 28602466  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||||||| |||||||||  |||||||||| ||| ||||  |||||| ||| ||||||||||||||||||||||||||||||||    
T  28602467 gaactttattcccacccttttccttgggaaattttttctattctcagaaacattttatac-cgggaataaaatttagtaaacttgtaacaaacatag 28602562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 27480900 - 27481033
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    ||||||||||||||||||| | |||||||||| |||| ||| ||||| |||| ||||||||||||| |||||||  |||| | | |||||||||||||||    
T  27480900 aatttattctcatctccatggaaactttattctcaccttttccttggaaaaaattttctattcccatgaacattttatacacaggaataaaatttagtaa 27480999  T
Q  939 acttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||  ||||| |||||    
T  27481000 acttgtaacaaacatagacatacatattcctatc 27481033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 669 - 976
Target Start/End: Complemental strand, 31583404 - 31583106
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnnn 768  Q
    ||||||||||| |||||||  ||||||||| ||| ||||||||||| ||| ||||||||||||||||| ||||| |||| |||||||                 
T  31583404 tgtgtttgttttaagtttactaaatttatttctacgaataacattctttgaaacataaagatggaaatattatttcaagatatttagaaaaaa------- 31583312  T
Q  769 nnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactt 868  Q
        || || | ||||||||||||||||| | |||||| || ||||||| |  |||||| ||| |||||  || | |||||  |||||   | | |||||    
T  31583311 ----atattggtttaacattataatattctcaggaaccgtaaaaatagggattataataggtacttacat-atgaattatttccatctttgtgggaactt 31583217  T
Q  869 tattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtata 964  Q
    |||||||||| ||||||| ||||||||||  |||||||  ||||| ||  |||||||| |||||||||||||||||||||||||||||||||||  ||||    
T  31583216 tattcccacctttttctttggaaaattttttctattcctgggaacgttttatactcgggaataaaatttagtaaacttgtaacaaacatagaca-atata 31583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 555887 - 555753
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||| ||||||||  ||||   | |||||| |||||||    
T  555887 aatttattcccatctccatggaaactttattcccacccttttccttgggaaattttttctattccctggaacattttataccaaggaataaattttagta 555788  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || |||||||||    
T  555787 aacttgtaacaaacatagacatatacatttctatc 555753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 8406784 - 8406918
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||| ||||| |||||||| |||| |||||||||||||||||  |||| ||| |||||||||||| |    
T  8406784 aatttattcccatctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagca 8406883  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||| |||| |||||| ||| |||||    
T  8406884 aacttgtaacaaatataggcatgtacattcctatc 8406918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 42012360 - 42012226
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    |||||||||| ||||||||   ||||||||||||||||||||| || ||||| |||| ||||||| |||||||||  |||||||  ||||||||||||||    
T  42012360 aatttattctgatctccatgtgaactttattcccacccttttccttcggaaattttttctattcctaggaacattttatactcgagaataaaatttagta 42012261  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    || ||||||||||||||||||| | ||||||||||    
T  42012260 aatttgtaacaaacatagacatatgtatttctatc 42012226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 668 - 972
Target Start/End: Original strand, 1664456 - 1664754
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||| |||| || |||||||||  ||||||||| ||||||||||||                
T  1664456 gtgtgtttgtttcaagtttaccaaatttattcctgagaataatatttcttgaaatataaagatgagaattttatttcaaggtatttagaaaaaat----- 1664550  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
         ||||||| ||||| |||||||||||    |||||||| ||||||| |  |||||| |||| ||||    ||||||||||||||||||| | || |    
T  1664551 -----atgtttggttaactttataatattcttatgaaccataaaaatagggattataataggtaactacatataaatttattctcatctccatgggaatt 1664645  T
Q  868 ttattcccacccttttctt--gggaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    | |||||||||| ||||||  || |||| ||||||||| ||||||||  |||||   || ||||||||||||| || ||||||||||||||  ||| ||     
T  1664646 taattcccacccgtttctttgggaaaaaatttctattctcaggaacattttatagctggtaataaaatttagtcaatttgtaacaaacataagcatatag 1664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 669 - 755
Target Start/End: Complemental strand, 8646735 - 8646649
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||| ||||||    
T  8646735 tgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagataggaattttattccaaggaatttag 8646649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 669 - 739
Target Start/End: Original strand, 20962286 - 20962356
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaatttt 739  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  20962286 tgtgtttgttttaagtttatcaaatttattcataggaataacattccttggaacataaagatggaaatttt 20962356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 1262858 - 1262960
Alignment:
Q  323 gtggataccaacggtattttacaaacgaaagaaccaataggagcagcctcaaatcatccaatatcaaacaaaaacataaacataatgacaacattaaaga 422  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||    || |||||||||||||||||||||||||||||||||||||| || |||||| |    
T  1262858 gtggataccaacaatattttacaaatgaaagaaccaacaggagt---cttaaatcatccaatatcaaacaaaaacataaacataatgataatattaaata 1262954  T
Q  423 atgttc 428  Q
    ||||||    
T  1262955 atgttc 1262960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 665 - 754
Target Start/End: Original strand, 28429450 - 28429539
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||| |||||||||| |||  |||||||||||||| || |||||||||  ||||||||||||| |||||||    
T  28429450 agggtgtgtttgtttcaagtttaccaaatttatttctagaaataacattccttgaaatataaagatgtgaattttattccaaagtattta 28429539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 664 - 754
Target Start/End: Original strand, 6930363 - 6930453
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||||||||| || || ||||||  |||||||||  ||||||||||    
T  6930363 aagggtgtgtttgttttaagtttatcaaatttattcatatgaataacattccttgaaatatcaagatgagaattttattttaaggtattta 6930453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 665 - 952
Target Start/End: Complemental strand, 43347243 - 43346962
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||   |||||||||| || ||||||||||  |||||| |||||||||  || ||||||| |||||||||||             
T  43347243 agggtgtgtttgtttcaagttttcgaaatttattcttaggaataacatttattggaatataaagatgagaagtttattctaaggtatttagaaaaaaa-- 43347146  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataa-tttattctcatctccattgt 863  Q
            | ||||| |||||| | ||||||||   |||||| || ||||||| |  | |||| |||||||| | |||| ||||||||||||| ||| |     
T  43347145 --------aagtttggttaacaatgtaatattcgaaggaaccttaaaaatagggattaaaataggtaattacgc-ataattttattctcatcttcatggg 43347055  T
Q  864 aactttattcccacccttttcttgggaaaa--ttttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaaca 952  Q
    ||||||||||||||||||||| | ||||||  ||||||||| |||| ||||  ||||||  || |||||||||||||||||||||||||||||    
T  43347054 aactttattcccacccttttcattggaaaaacttttctattgccagaaacaatttatacctgggaataaaatttagtaaacttgtaacaaaca 43346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 667 - 755
Target Start/End: Original strand, 36703506 - 36703594
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||| |||| ||||||||||| || ||||||||||||||||||  ||||||||  ||||||||| ||||| ||||||    
T  36703506 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacattccttggaatttaaagatgagaattttatttcaaggaatttag 36703594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 772 - 959
Target Start/End: Complemental strand, 40276006 - 40275815
Alignment:
Q  772 gatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataattt-attctcatctccattgtaacttta 870  Q
    |||||||| |||| ||||||||||||   |||||| || ||||||| |   ||||| || |||| | |||||||| |||| ||||| ||| | |||||||    
T  40276006 gatgtttggttaatattataatattccatggaaccttaaaaatagggattttaataggttattaga-gataattttattcccatcttcatgggaacttta 40275908  T
Q  871 ttcccacccttttctt-gggaaaa-ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||| | ||||||| ||||||| ||||||||||||||||| |||  |||   || |||||||||||| |||||||||||||||||||||||    
T  40275907 ttcccatcattttctttgggaaaacttttctattcccaggaatatttcatatctgggaataaaatttagcaaacttgtaacaaacatagacat 40275815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 965
Target Start/End: Original strand, 6930531 - 6930657
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttctt-gggaaaattttctattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    ||||||||  ||||| ||| | ||||||||||||||  ||||||| |||||| |||||||||||||  || |||  |||  || ||||||||||||||||    
T  6930531 aatttatttccatcttcatgggaactttattcccacaattttctttgggaaatttttctattcccaataatattttatatccgaaaataaaatttagtaa 6930630  T
Q  939 acttgtaacaaacatagacatgtatat 965  Q
    |||||||||||||||| |||| |||||    
T  6930631 acttgtaacaaacataaacatatatat 6930657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 671 - 754
Target Start/End: Complemental strand, 16721029 - 16720946
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||  ||||||||||||| ||||||||||| |||||| ||||| |||  |||||||||| ||| ||||||    
T  16721029 tgtttgtttcaagtttactaaatttattcctaggaataacattcattggaatataaaaatgtgaattttattcaaagatattta 16720946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 913 - 972
Target Start/End: Original strand, 28429666 - 28429725
Alignment:
Q  913 ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||| |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  28429666 ttatattcgggaataaaatttagtaaacttgtaacaaatataggcatgtatatttctatc 28429725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 924 - 976
Target Start/End: Complemental strand, 3913295 - 3913243
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcgttt 976  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  3913295 aataaaatttagtaaatttgtaataaacatacacatgtatatttctatcgttt 3913243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 669 - 754
Target Start/End: Complemental strand, 36978478 - 36978393
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||| |||||||||  || ||||||||||| || ||| ||||| |||  |||||||||  ||||||||||    
T  36978478 tgtgtttgtttcaagtttattaaatttatttataggaataacattctttagaatataaatatgagaattttattttaaggtattta 36978393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 668 - 753
Target Start/End: Complemental strand, 42012530 - 42012445
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattt 753  Q
    ||||||||||||||||||||  |||||||||  || ||||||||||  |||||| | |||||||| |||||| ||| |||||||||    
T  42012530 gtgtgtttgtttcaagtttactaaatttatttttaggaataacattttttggaataaaaagatgggaattttgttctaaggtattt 42012445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 924 - 972
Target Start/End: Complemental strand, 26637138 - 26637090
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  26637138 aataaaatttagtaaacttgtaacaaatatagacatatataattctatc 26637090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 666 - 754
Target Start/End: Complemental strand, 27079308 - 27079220
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||| ||||  ||||| |||||||| |   | ||||| ||||| || ||||||||||||||||||||||||| ||||||||||    
T  27079308 gggtgtgtttctttccggtttaccaaatttagttgaaggaatagcattcatttgaacataaagatggaaattttattctaaggtattta 27079220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 667 - 755
Target Start/End: Original strand, 27480735 - 27480823
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||| ||| ||||||| ||||||||||  || |||||| ||| |||| || |||||||||  ||||||||| ||||||||||||    
T  27480735 ggtgtgtttattttaagtttaccaaatttatttttaggaataatatttcttgaaatataaagatgagaattttatttcaaggtatttag 27480823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 664 - 754
Target Start/End: Complemental strand, 35603123 - 35603034
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||| ||||||| || |||||| |||  || ||||||||||  |||||| |||||||| |||||||||||| || |||||||    
T  35603123 aagggtgtgtttggttcaagtgtaccaaatt-atttttaggaataacattttttggaatataaagatagaaattttattctaaagtattta 35603034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 924 - 977
Target Start/End: Complemental strand, 16720307 - 16720254
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcgttta 977  Q
    |||||||||||||||||||| ||||||||||   ||||||||||||||| ||||    
T  16720307 aataaaatttagtaaacttgcaacaaacatatgtatgtatatttctatcattta 16720254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 924 - 972
Target Start/End: Complemental strand, 36978266 - 36978218
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||| ||||  ||||||||||||||||||| ||||||||||||    
T  36978266 aataaaattttgtaagtttgtaacaaacatagacatatatatttctatc 36978218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 924 - 971
Target Start/End: Complemental strand, 19089812 - 19089765
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacatagacatgtatatttctat 971  Q
    ||||||||||| ||||||| ||||||||||| ||||| ||||||||||    
T  19089812 aataaaatttaataaacttataacaaacataaacatgcatatttctat 19089765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 751
Target Start/End: Complemental strand, 19090016 - 19089933
Alignment:
Q  669 tgtgtttgtttcaagtttatcaaatttattcctaagaataacattc-cttggaacataaagatggaaattttattccaaggtat 751  Q
    |||||||| ||||| |||| ||||||||||  ||||||||| |||  ||| |||||||||||||  |||| |||||||||||||    
T  19090016 tgtgtttgattcaaatttaccaaatttatttttaagaataatattttcttagaacataaagatgagaattctattccaaggtat 19089933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 664 - 694
Target Start/End: Original strand, 7441577 - 7441607
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatt 694  Q
    |||||||||||||||||||||||||||||||    
T  7441577 aagggtgtgtttgtttcaagtttatcaaatt 7441607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 913 - 950
Target Start/End: Complemental strand, 35602929 - 35602892
Alignment:
Q  913 ttatactcggaaataaaatttagtaaacttgtaacaaa 950  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  35602929 ttatcctcggaaataaaatttaataaacttgtaacaaa 35602892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 4e-44; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 666 - 955
Target Start/End: Original strand, 38363804 - 38364088
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||              
T  38363804 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat--- 38363900  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgta 864  Q
           ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| | |    
T  38363901 -------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggga 38363993  T
Q  865 actttattcccaccc-ttttcttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||    
T  38363994 actttattcccaccctttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 38364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 664 - 972
Target Start/End: Complemental strand, 37392896 - 37392593
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  37392896 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat- 37392798  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  37392797 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 37392707  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||||| |||||||||||||||||||| ||    
T  37392706 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggca 37392607  T
Q  959 tgtatatttctatc 972  Q
    | || ||| |||||    
T  37392606 tatacattcctatc 37392593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 668 - 972
Target Start/End: Original strand, 41432464 - 41432764
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    |||||||||||| ||||||||||||||||||  || |||||||||| |||| ||||||||||||||||||||||||||||| |||||                 
T  41432464 gtgtgtttgttttaagtttatcaaatttatttttaggaataacatttcttgaaacataaagatggaaattttattccaaggcattta--------aaaaa 41432555  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctc-atctccattgtaac 866  Q
         |||||||||||||||||||||||||  |||| ||||| |||||||||  |||||| | |||||| |   ||||||||||| |||||||| | |||    
T  41432556 aatatatgtttgcttaacattataatattcttgggagccataaaaataggaattataataggaaattactcatgaatttattctcaatctccatgggaac 41432655  T
Q  867 tttattcccaccc-ttttcttggg-aaaattttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    |||||| |||||| |||||| ||| |||||||||||||||||  |||   |||||| ||| ||||||||||||||||||||||||||||||| ||||||     
T  41432656 tttatttccaccctttttctagggaaaaattttctattcccataaacgttttatac-cgggaataaaatttagtaaacttgtaacaaacataaacatgtg 41432754  T
Q  963 tatttctatc 972  Q
    |||| |||||    
T  41432755 tattcctatc 41432764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 664 - 955
Target Start/End: Complemental strand, 35818774 - 35818488
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||            
T  35818774 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat- 35818676  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |    
T  35818675 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgg 35818585  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
     |||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||    
T  35818584 gaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 35818488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 665 - 976
Target Start/End: Complemental strand, 16219290 - 16218986
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||| ||||||||  ||||||||||||||||||||||             
T  16219290 agggtgtgtttgttttaagtttatccaatttattcctaggaataacgttccttggaacttaaagatgagaattttattccaaggtatttag--------- 16219200  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgta 864  Q
           |||||||| |||||||||||||||||  |||||||||  |||| || |  |||||| |||||||||||   |||||||| ||||| ||| | |    
T  16219199 -aaaaaagatgtttggttaacattataatattcttgggaaccatgaaaatggggattataataggtaattacacgtggatttattcccatcttcatggga 16219101  T
Q  865 actttattcccacccttttcttgggaaaatttt-ctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    |  ||||||||||| |||  ||||| ||||||| |||||||   ||||   ||| || | | |||||||| ||||||||||||||||||||||| |||      
T  16219100 agattattcccaccttttctttggggaaattttactattcctgagaacgttttaaaccccggaataaaatctagtaaacttgtaacaaacataggcatac 16219001  T
Q  962 atatttctatcgttt 976  Q
    |||||||||||||||    
T  16219000 atatttctatcgttt 16218986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 3049899 - 3050033
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||||   |||||||||||||||||||  |||||| ||| ||||||||||||||    
T  3049899 aatttattctcatctccatgggaactttattcccacccttttctttggaaatttttttctattcccaggaacattttatacccgggaataaaatttagta 3049998  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  3049999 aacttgtaacaaacataggcatatacattcctatc 3050033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 664 - 972
Target Start/End: Complemental strand, 38133088 - 38132784
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||  ||||||||||||||| ||||||            
T  38133088 aagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat- 38132990  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| |||||||||      
T  38132989 ---------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcacatctccatga 38132899  T
Q  863 taactttattcccaccctttt-cttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagac 957  Q
     |||||||||||||||||||| |||||||||   |||||||||||||||||||  ||||||   | |||||| |||||||||||||||||||||||||||    
T  38132898 gaactttattcccacccttttccttgggaaatttttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagac 38132799  T
Q  958 atgtatatttctatc 972  Q
    || || |||||||||    
T  38132798 atatacatttctatc 38132784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 665 - 959
Target Start/End: Original strand, 15226688 - 15226975
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    |||||| ||||||||||| |||| ||||||||||  || ||||||| |||||||||| |||||||||  ||||||||| ||||||||||||             
T  15226688 agggtgcgtttgtttcaattttaccaaatttattattaggaataactttccttggaatataaagatgagaattttatttcaaggtatttagaaaaaat-- 15226785  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataattt-attctcatctccattgt 863  Q
            ||||||| ||||| |||||| | ||   |||||| || ||||||| |  |||||| |||||| ||| ||||||| |||||||||| ||| |     
T  15226786 --------atgtttggttaactttataaaaatccaaggaaccttaaaaatagggattataataggtaattccac-ataattttattctcatcttcatggg 15226876  T
Q  864 aactttattcccacccttttctt-gggaaaattttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||||| |||||  |||||||||| |||||| |||  |||| ||||||||||||||||||||||||||||||||||| ||||    
T  15226877 aactttattcccacccttttctttgggaatcttttctattcgcaggaatattttatacccggaaataaaatttagtaaacttgtaacaaacataaacat 15226975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 776 - 972
Target Start/End: Complemental strand, 29421736 - 29421536
Alignment:
Q  776 tttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttattccc 875  Q
    |||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| |||| ||||    ||||||||||||||||||| | ||||||||||||    
T  29421736 tttgattaactttataatattcctaggaaccataaaaatagggattataataggtaactacatataaatttattctcatctccatgggaactttattccc 29421637  T
Q  876 acccttttctt-gggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctat 971  Q
    ||| ||||||| ||||||||||| |||||||||| || |||  |||| ||  ||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  29421636 accattttctttgggaaaatttttctattcccagaaatattttatacccgagaataaaatttaataaacttgtaacaaacataaacatatatatttctat 29421537  T
Q  972 c 972  Q
    |    
T  29421536 c 29421536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 667 - 755
Target Start/End: Original strand, 18297836 - 18297924
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  18297836 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 18297924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 667 - 953
Target Start/End: Complemental strand, 19161088 - 19160807
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||  || |||||| || |||||||||               
T  19161088 ggtgtgtttgtttcaagtttatcaaatttattctcaagaataacattctttggaatataaagatgagaaatttatttcagggtatttagaaaaaaat--- 19160992  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaac 866  Q
          ||||||| ||| |||||||||||||   ||||||||| ||||||| |  |||||| |||||||||    |||| ||||||||||||||   |||    
T  19160991 ------atgtttggttagcattataatattcttaggaaccataaaaatagggattataataggtaattacatatgaattcattctcatctccatgacaac 19160898  T
Q  867 tttattcccacccttttcttgggaa--aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacat 953  Q
    |||||||||||||||||||| ||||    |||| |||||||| ||| |  |||||| ||| ||| ||||||||||||||||||||||||||    
T  19160897 tttattcccacccttttctttggaattttttttatattcccaagaatattttatacacgggaatgaaatttagtaaacttgtaacaaacat 19160807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 1554535 - 1554401
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| ||| |||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  1554535 aatttattcccatctccatggaaactttattcccacccttttccttgagaaattttttctattcccaggaacattttatacccgggaataaaatttagta 1554436  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||| || ||| |||||    
T  1554435 aacttgtaacaaacatagacatatacattcctatc 1554401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 664 - 747
Target Start/End: Original strand, 12710366 - 12710449
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaag 747  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  12710366 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag 12710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 25837801 - 25837935
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttctt-gggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||| |||||||||| || ||||||||||| |||||||||||||||||  |||| ||| |||||||||| |||    
T  25837801 aatttattctcatctccatgggaactttattgccacccttttttttgggaaaatttttctattcccaggaacattttatacccgggaataaaattttgta 25837900  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| |||||| ||| |||||    
T  25837901 aacttgtaacaaacataggcatgtacattcctatc 25837935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 668 - 755
Target Start/End: Original strand, 42755592 - 42755679
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||||| ||||||    
T  42755592 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatatgaagatgggaattttattccaaggaatttag 42755679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 842 - 955
Target Start/End: Complemental strand, 16313688 - 16313571
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||| |||| ||||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  16313688 aatttattctcatctccatgggaactttattcccaccatttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 16313589  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  16313588 aacttgtaacaaacatag 16313571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 18298002 - 18298119
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||| ||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  18298002 aatttattctcatttccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 18298101  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  18298102 aacttgtaacaaacatag 18298119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 26061865 - 26062168
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| || |||||||||  ||||||||||||||| ||||||            
T  26061865 aagggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttgtaatataaagatgagaattttattccaaggaatttaggaaaaat- 26061963  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||||| |||||||||||   ||||||||| ||||||| |  |||||| || |||||      ||||||||| ||||||||| |    
T  26061964 ---------atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatctccatgg 26062054  T
Q  863 taactttattcccaccc-ttttcttgggaa-aattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     |||||||||||||||| ||||||||||||   ||||||||||||||| |||  ||||||   | |||||| |||||||||||||||||||||||||  |    
T  26062055 gaactttattcccaccctttttcttgggaatttttttctattcccagggacattttataccaaggaataaattttagtaaacttgtaacaaacataggaa 26062154  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  26062155 tatacatttctatc 26062168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 665 - 754
Target Start/End: Complemental strand, 32661283 - 32661194
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  32661283 agggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaattta 32661194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 664 - 963
Target Start/End: Complemental strand, 43872315 - 43872022
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    |||||||||||||||||||||||  |||||||||| ||| ||||||||||||||| || ||| ||||| |||||||||||||||||||||||            
T  43872315 aagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtatttag-------- 43872224  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgt 863  Q
            |||||||| ||||||||||||| ||    ||||||  | ||||||| |  |||||| ||||||| |||  | ||||||| |||||||||       
T  43872223 --aaaaaagatgtttggttaacattataatgtttcaaggaacctcaaaaatagggattataataggtaattatacgtgattttattcccatctccatatg 43872126  T
Q  864 aactttattcccacccttttcttgggaaaa--ttttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||| |||  |||||| | ||||   ||| ||||||||||||||  |||||| ||| |||||||||||  ||||||||||||||||||| |||    
T  43872125 aactttattcctaccaatttctttgaaaaaatatttatattcccaggaacattttatacccgggaataaaatttaacaaacttgtaacaaacataggcat 43872026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 12710535 - 12710669
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  12710535 aatttattctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagta 12710634  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || |||||||||    
T  12710635 aacttgtaacaaacataggcatatacatttctatc 12710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 16313857 - 16313766
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||  ||||||||||||||| ||||||    
T  16313857 aagggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaaggaatttag 16313766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 25837632 - 25837723
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||| ||||||||||  || |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  25837632 aagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 25837723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 3049731 - 3049821
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||| || |||||||||| |||||||||| |||| ||||||    
T  3049731 agggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttgaaatataaagatgggaattttattcgaaggaatttag 3049821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 26602286 - 26602196
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||| |||  |||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  26602286 agggtgtgtttgtttcaagtttaccaaatttattgctagaaataacattccttgaaacataaagatgggaattttattccaaggaatttag 26602196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 665 - 972
Target Start/End: Original strand, 7930961 - 7931263
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||| |||||||||  ||||||||||||||| ||||||             
T  7930961 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaat-- 7931058  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||||||| |     
T  7931059 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggg 7931150  T
Q  864 aactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    |||||||||||||||||||| |||||||||  |||||||||| ||||||||  ||||||   | |||||| |||||||||||| ||||||||||| ||||    
T  7931151 aactttattcccacccttttccttgggaaattttttctattctcaggaacattttataccaaggaataaattttagtaaacttataacaaacatatacat 7931250  T
Q  960 gtatatttctatc 972  Q
     || |||||||||    
T  7931251 atacatttctatc 7931263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 670 - 755
Target Start/End: Complemental strand, 10896560 - 10896475
Alignment:
Q  670 gtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||||    
T  10896560 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttag 10896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 667 - 972
Target Start/End: Complemental strand, 18726967 - 18726666
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||  |||||| ||||||||| |||||||||||||||| ||||||               
T  18726967 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattaattggaatataaagatgaaaattttattccaaggaatttaggaaaaat---- 18726872  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgtaa 865  Q
          ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||  |||||||||   ||    
T  18726871 ------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttatttccatctccatgagaa 18726778  T
Q  866 ctttattcccaccctttt-cttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatg 960  Q
    |||||||||||||||||| |||||||||   |||||||||||||||||||  ||||||  || |||||||||||||||||||||||||||||||| |||     
T  18726777 ctttattcccacccttttccttgggaaatttttttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcata 18726678  T
Q  961 tatatttctatc 972  Q
    || ||| |||||    
T  18726677 tacattcctatc 18726666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 32661115 - 32660980
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc--ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagt 936  Q
    ||||||||| ||||||||| | |||||||||||||||||||||  |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||| |    
T  32661115 aatttattcccatctccatgggaactttattcccacccttttcccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaat 32661016  T
Q  937 aaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||||| ||| || ||| |||||    
T  32661015 aaacttgtaacaaacataggcatatacattcctatc 32660980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 26602118 - 26601985
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||||||  ||||||||||||| |||||  |||||| | | ||||||||||||||    
T  26602118 aatttattctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaagaacattttatac-caggaataaaatttagta 26602020  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  26602019 aacttgtaacaaacataggcatatacattcctatc 26601985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 667 - 884
Target Start/End: Complemental strand, 37982134 - 37981925
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatg-gaaattttattccaaggtatttagnnnnnnnnnn 765  Q
    ||||||||||||||||||||| ||||||||||  || |||||||||||||| ||||||||||||| ||| |||||||||||||||||||               
T  37982134 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattcctt-gaacataaagatgagaatttttattccaaggtattta--------aaa 37982044  T
Q  766 nnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaa 865  Q
          ||||||||||||||||||||||||| | |||||||||| ||||||| |  |||| | |||||||||    ||||||||||||| | ||| | ||    
T  37982043 aaaaaagatgtttgcttaacattataatatttatgggaaccataaaaatagggattataacaagtaattacatataaatttattctcattttcataggaa 37981944  T
Q  866 ctttattcccacccttttc 884  Q
    ||||||| |||||||||||    
T  37981943 ctttatttccacccttttc 37981925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 842 - 944
Target Start/End: Complemental strand, 6805804 - 6805698
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttctt--gggaaaattttctattcccaggaacat--tatactcggaaataaaatttagta 937  Q
    |||||||||||||||||||   |||||||||| ||||||||||||  || ||||||||||||||||| ||||||  ||||||||| ||||||||||||||    
T  6805804 aatttattctcatctccatgagaactttattctcacccttttctttaggaaaaattttctattcccaagaacatattatactcgggaataaaatttagta 6805705  T
Q  938 aacttgt 944  Q
    |||||||    
T  6805704 aacttgt 6805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 773 - 971
Target Start/End: Complemental strand, 21137382 - 21137180
Alignment:
Q  773 atgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttatt 872  Q
    ||||||| ||||| |||||||||||   ||||||||| ||||| | |  |||||| |||| ||||    ||||||||||||||||||    |||||||||    
T  21137382 atgtttggttaactttataatattcctaggaaccataaaaatacggattataataggtaactacatatgaatttattctcatctccacgagaactttatt 21137283  T
Q  873 cccacccttttcttgggaaaatt--ttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttc 968  Q
     ||||| ||||||| |||||| |  || ||||||||  ||||||  |||| ||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  21137282 tccaccattttctttggaaaaatatttatattcccacaaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatatatttc 21137183  T
Q  969 tat 971  Q
    |||    
T  21137182 tat 21137180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 668 - 755
Target Start/End: Complemental strand, 5020837 - 5020750
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||  || ||||||||||| |||||| |||||||||  |||||||||| |||||||||||    
T  5020837 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacattctttggaatataaagatgataattttattctaaggtatttag 5020750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 33533742 - 33533651
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||  ||||||| ||| |||||||||  ||||||||||||| ||||||||    
T  33533742 aagggtgtgtttgtttcaagtttgtcaaatttattcctaggaatattattcctttgaatataaagatgtgaattttattccaatgtatttag 33533651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 42755757 - 42755891
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    |||||||||||||||||||   ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||   | |||||| |||||||    
T  42755757 aatttattctcatctccatgagaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacaaaggaataaattttagta 42755856  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||| ||||||| ||| || |||||||||    
T  42755857 aacttgtaactaacataggcatatacatttctatc 42755891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 25899381 - 25899471
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||| || ||||||||||  || |||||||||||||||||| |||||||| | |||||||||| |||||||||||    
T  25899381 agggtgtgtttgtttcaagtgtaacaaatttatttttaggaataacattccttggaatataaagataggaattttattctaaggtatttag 25899471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 667 - 755
Target Start/End: Complemental strand, 33444969 - 33444881
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||   ||||||||| ||||||||||||| | ||||| ||||||||| |||||||||| ||||||||||||    
T  33444969 ggtgtgtttgtttcaagtttactgaatttattcataagaataacatttcatggaatataaagatgaaaattttatttcaaggtatttag 33444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 7317265 - 7317397
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaatttt-ctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||| |||| |||||||||||||| |||| || |||||||  |||||  ||||| ||||||||||||    
T  7317265 aatttattcccatctccatgggaactttattcccaccatttttcttgggaaaatttttctat-cctaggaacactttatatccggaa-taaaatttagta 7317362  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| |||||| |||||    
T  7317363 aacttgtaacaaacataggcatatatattcctatc 7317397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 40197403 - 40197312
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||| |||||| |||||||||| |||||||||||||| |||||| |||| |||||| |||||||||| |||||||||| |||| ||||||    
T  40197403 aagggtttgtttgcttcaagtttaccaaatttattcctaggaataatattctttggaatataaagatgggaattttattctaaggaatttag 40197312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 951
Target Start/End: Complemental strand, 41228894 - 41228782
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    |||||||||| |||||||| | ||||||||||||||||||||| | || |||||||  ||||||| |||||||||  |||| ||| ||||||||||||||    
T  41228894 aatttattct-atctccataggaactttattcccacccttttcctcgggaaattttttctattccaaggaacattttatacccgggaataaaatttagta 41228796  T
Q  938 aacttgtaacaaac 951  Q
    ||||||||||||||    
T  41228795 aacttgtaacaaac 41228782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 666 - 755
Target Start/End: Complemental strand, 31117874 - 31117785
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||||||||||||   || ||||||||||| |||||| |||||||||  ||||||||| ||| ||||||||    
T  31117874 gggtgtgtttgtttcaagtttatcaaatttatatttaggaataacattcattggaatataaagatgagaattttatttcaaagtatttag 31117785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 862 - 958
Target Start/End: Original strand, 25899543 - 25899642
Alignment:
Q  862 gtaactttattcccacccttttcttgggaaaa--ttttctattcccaggaacatt-atactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
    |||| ||||||| |||| ||||||| ||||||  ||||||||||| ||||||||| |||| ||||||||||||||| |||||||| ||||||||||||||    
T  25899543 gtaattttattctcaccattttctttggaaaaacttttctattccgaggaacatttatacccggaaataaaatttaataaacttgcaacaaacatagaca 25899642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 677 - 755
Target Start/End: Complemental strand, 1554692 - 1554613
Alignment:
Q  677 tttcaagtttatcaaatttattcctaagaataacattccttggaacat-aaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||| ||||||||||| || |||||||||||||||||| || |||||||| ||||||||||||||| ||||||    
T  1554692 tttcaagtttaccaaatttattcttaggaataacattccttggaatataaaagatgggaattttattccaaggaatttag 1554613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 867 - 976
Target Start/End: Original strand, 38437369 - 38437482
Alignment:
Q  867 tttattcccacccttttcttggg--aaaattttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgta 962  Q
    |||||| ||||||||||||| ||  |||||||||||||| ||||||| ||  |||| || ||||||||||| |||||||||||||||||||||| || |     
T  38437369 tttatttccacccttttctttgggaaaaattttctattctcaggaacgttttatacccgaaaataaaattttgtaaacttgtaacaaacatagatatatg 38437468  T
Q  963 tatttctatcgttt 976  Q
    |||| |||||||||    
T  38437469 tattcctatcgttt 38437482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 849 - 972
Target Start/End: Complemental strand, 33444798 - 33444673
Alignment:
Q  849 tctcatctccattgtaactttattcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgt 944  Q
    |||||||| ||| | ||||||||||||||| ||||||| ||  ||||||  ||||||||| |||||||  |||| ||| ||||||||||||||| |||||    
T  33444798 tctcatcttcatgggaactttattcccaccattttctttgggcaattttttctattcccaagaacattttatac-cgggaataaaatttagtaa-cttgt 33444701  T
Q  945 aacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||| ||||||| ||||    
T  33444700 aacaaacatagacatatatatttttatc 33444673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 913 - 969
Target Start/End: Original strand, 35394355 - 35394411
Alignment:
Q  913 ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttct 969  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  35394355 ttatacccgggaataaaatttagtaaacttgtaacaaacatagacatatatatttct 35394411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 10896397 - 10896264
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaattttctattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    ||||||||| ||||||||| | |||||||||||||||||||| ||||      |||||||||||||||||||||  ||||   | |||||| ||||||||    
T  10896397 aatttattcccatctccatgggaactttattcccaccctttttcttgatttttttttctattcccaggaacattttataccaaggaataaattttagtaa 10896298  T
Q  939 acttgtaacaaacatagacatgtatatttctatc 972  Q
    | ||||||||||||||| ||| || |||||||||    
T  10896297 atttgtaacaaacataggcatatacatttctatc 10896264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 842 - 954
Target Start/End: Complemental strand, 5020674 - 5020558
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaaa-ttttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||| ||||| ||| | |||||||||||||||||||| |||||||||| |||||||||| ||| ||||  |||||| ||  | |||| |||||||    
T  5020674 aatttattcccatcttcatgggaactttattcccacccttttccttgggaaaatttttctattcacagaaacattttatacccgagagtaaactttagta 5020575  T
Q  938 aacttgtaacaaacata 954  Q
    ||||||||| |||||||    
T  5020574 aacttgtaagaaacata 5020558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 664 - 721
Target Start/End: Original strand, 35394079 - 35394136
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaa 721  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||    
T  35394079 aagggtgtgtttgtttcaagtttatcaaatttattcttagtaataacattctttggaa 35394136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 701 - 751
Target Start/End: Complemental strand, 6805939 - 6805889
Alignment:
Q  701 taagaataacattccttggaacataaagatggaaattttattccaaggtat 751  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  6805939 taagaataacattccttgaaatataaagatgggaattttattccaaggtat 6805889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 668 - 754
Target Start/End: Complemental strand, 21137476 - 21137391
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||  ||||||||||||||||| ||| ||||||||||  |||||| |||||||||  |||||||||  ||||||||||    
T  21137476 gtgtgtttgtttttagtttatcaaatttattacta-gaataacattttttggaatataaagatgagaattttattttaaggtattta 21137391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 894 - 972
Target Start/End: Complemental strand, 14764058 - 14763978
Alignment:
Q  894 ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||| || |||||||  |||| ||  |||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  14764058 ttttctattctcatgaacattttatacccgtgaataaaatttagtaaacttgaaacaaacatatgcatgtatatttctatc 14763978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 34672083 - 34672175
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacat--aaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||| ||||||||||||||||||  ||  ||||||| |||||| || ||  ||||||||||||||||| | ||||| |||||    
T  34672083 agggtgtgtttgttttaagtttatcaaatttatttttagaaataacagtccttgaaatataaaaagatggaaattttatactaaggtttttag 34672175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 667 - 718
Target Start/End: Original strand, 12649859 - 12649910
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttg 718  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||| ||||||    
T  12649859 ggtgtgtttgtttcaagtttaccaaatttatttctacgaataacaatccttg 12649910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 864 - 969
Target Start/End: Complemental strand, 31117689 - 31117580
Alignment:
Q  864 aactttattcccacccttttcttgggaaa--attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacat 959  Q
    ||||||||||||||||||||  | |||||   ||||||||||  | |||||  ||||| |||||||||||||||| |||| | |||||||||||||| ||    
T  31117689 aactttattcccaccctttttcttggaaatttttttctattctgaagaacattttatattcggaaataaaatttaataaaatcgtaacaaacatagatat 31117590  T
Q  960 gtatatttct 969  Q
     |||||||||    
T  31117589 atatatttct 31117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 667 - 752
Target Start/End: Original strand, 37124073 - 37124157
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatt 752  Q
    ||||||||| ||| ||||||||||||||||||  ||| ||||||| |  |||||| |||||||||  ||||||||| |||||||||    
T  37124073 ggtgtgtttattttaagtttatcaaatttattgttaaaaataacaatatttggaatataaagatgagaattttatt-caaggtatt 37124157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 708 - 754
Target Start/End: Original strand, 35394156 - 35394202
Alignment:
Q  708 aacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||| || |||||||||  |||||||||||||||||||||    
T  35394156 aacattccttgaaatataaagatgagaattttattccaaggtattta 35394202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 666 - 700
Target Start/End: Complemental strand, 41229017 - 41228983
Alignment:
Q  666 gggtgtgtttgtttcaagtttatcaaatttattcc 700  Q
    |||||||||||||||||||||| ||||||||||||    
T  41229017 gggtgtgtttgtttcaagtttaccaaatttattcc 41228983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 88; Significance: 1e-41; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 672 - 972
Target Start/End: Original strand, 143342 - 143637
Alignment:
Q  672 gtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatg-gaaattttattccaaggtatttagnnnnnnnnnnnnnnn 770  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||| |||||||||| |                   
T  143342 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtatttggaaaaaat-------- 143433  T
Q  771 ngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaacttta 870  Q
      ||||||| ||||| |||||||||||   ||||||||| || |||| |  |||||| |||| ||||    ||||||||||||||||||| | |||||||    
T  143434 --atgtttggttaactttataatattcctaggaaccataaaattagggattataataggtaactacatatgaatttattctcatctccatgggaacttta 143531  T
Q  871 ttcccacccttttcttgggaaaatttt--ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatt 966  Q
    |||||||| ||||||| || |||||||  |||||||||||||||||  |||  ||| |||||||||||||||||||||||||||| || |||| ||||||    
T  143532 ttcccaccattttctttgggaaattttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacgtatacatatatatt 143631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 774 - 972
Target Start/End: Original strand, 119143 - 119344
Alignment:
Q  774 tgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaactttattc 873  Q
    |||||| | |||| |||||||||| | |||||| ||  |||||| |  |||||| ||| |||||| || |||||||||||||| | |   |||||||||     
T  119143 tgtttggtgaacactataatattccccggaaccttaagaatagggattataataggtagttacac-atgatttattctcatctgcctgaaaactttattt 119241  T
Q  874 ccacccttttcttgggaaaa--ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttct 969  Q
    ||||||||||||| ||||||  |||||||||||||||||||||  ||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  119242 ccacccttttctttggaaaaaattttctattcccaggaacattttatactcatgaataaaatttagtaaacttgtaacaaacatagacatgtatatttct 119341  T
Q  970 atc 972  Q
    |||    
T  119342 atc 119344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 201815 - 201949
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||| ||||||||||||| |||  |||| ||||||||||||||||||    
T  201815 aatttattctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaatattttatacccggaaataaaatttagta 201914  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  201915 aacttgtaacaaacataggcatatacattcctatc 201949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 664 - 755
Target Start/End: Original strand, 201647 - 201738
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||| ||||||    
T  201647 aagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattctaaggaatttag 201738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 671 - 742
Target Start/End: Original strand, 119051 - 119122
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttatt 742  Q
    |||||| || ||||||| ||||||||||| ||| |||||||||| |||||| |||||||||  |||||||||    
T  119051 tgtttgctttaagtttaccaaatttattcttaaaaataacattcattggaatataaagatgtgaattttatt 119122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 6e-37; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 667 - 972
Target Start/End: Original strand, 16968649 - 16968949
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnn 766  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||  ||||||||||||||| ||||||               
T  16968649 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaat---- 16968744  T
Q  767 nnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgat-aatttattctcatctccattgtaa 865  Q
          ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| ||||       || ||||||||||||||||||| | ||    
T  16968745 ------atgtttggttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccataggaa 16968838  T
Q  866 ctttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgt 961  Q
    ||||||||||||||||||| |||||||| |||| |||||||||| ||||||  |||| ||  |||||||||||||||||||||||||||||||||||| |    
T  16968839 ctttattcccacccttttccttgggaaattttttctattcccagaaacattttatacccgagaataaaatttagtaaacttgtaacaaacatagacatat 16968938  T
Q  962 atatttctatc 972  Q
    | ||| |||||    
T  16968939 agattcctatc 16968949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 664 - 972
Target Start/End: Original strand, 18897642 - 18897945
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnn 763  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||            
T  18897642 aagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat- 18897740  T
Q  764 nnnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattg 862  Q
             ||||||| ||| | |||||||||||   ||||||||| |||||||||  |||||| || || ||      ||||||||| ||||||||| |    
T  18897741 ---------atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaactatttatgaatttattcccatctccatgg 18897831  T
Q  863 taactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagaca 958  Q
     ||||||||| |||||||||| |||||||||  |||||||||||||| ||||  ||||||   | |||||| |||| |||||||||||||||||||| ||    
T  18897832 gaactttatttccacccttttccttgggaaattttttctattcccagaaacattttataccaaggaataaattttaataaacttgtaacaaacataggca 18897931  T
Q  959 tgtatatttctatc 972  Q
    | || |||||||||    
T  18897932 tatacatttctatc 18897945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 665 - 755
Target Start/End: Original strand, 2657422 - 2657512
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  2657422 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 2657512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 665 - 955
Target Start/End: Original strand, 1316741 - 1317025
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnn 764  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||  ||||||||||||||| ||||||             
T  1316741 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaat-- 1316838  T
Q  765 nnnnnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgt-aattacacgataatttattctcatctccattgt 863  Q
            ||||||| ||| | |||||||||||   ||||||||| ||||||| |  |||||| || || ||      ||||||||| ||||| ||| |     
T  1316839 --------atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatcttcatggg 1316930  T
Q  864 aactttattcccaccctttt-cttgggaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatag 955  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||  || ||||||||  ||||||||||||||||||||||    
T  1316931 aactttattcccacccttttccttgggaaatttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacatag 1317025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 845 - 970
Target Start/End: Complemental strand, 6705943 - 6705814
Alignment:
Q  845 ttattctcatctccattgtaactttattcccacccttttctt-gggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaaac 940  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||  ||||   | |||||||||||||||||    
T  6705943 ttattctcatctccatgggaactttattcccacccttttctttgggaacatttttctattcccaggaacattttatacctaggaataaaatttagtaaac 6705844  T
Q  941 ttgtaacaaacatagacatgtatatttcta 970  Q
    ||||||||||||||||||| ||||||||||    
T  6705843 ttgtaacaaacatagacatatatatttcta 6705814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 665 - 747
Target Start/End: Original strand, 8029025 - 8029107
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaag 747  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  8029025 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaag 8029107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 665 - 755
Target Start/End: Complemental strand, 10246465 - 10246375
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  10246465 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 10246375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 772 - 972
Target Start/End: Complemental strand, 346084 - 345878
Alignment:
Q  772 gatgtttgcttaacattataatattcacggg--aaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaacttt 869  Q
    ||||||||||||||||||||| ||||  | |  ||||||| |||||||||   ||||| | |||||| |   ||||||||||||||||||||| ||||||    
T  346084 gatgtttgcttaacattataacattcctgaggaaaccataaaaataggaattttaataggaaattactcatgaatttattctcatctccattggaacttt 345985  T
Q  870 attcccacccttttctt--gggaaaattttctattcccaggaac--attatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatat 965  Q
    |||||||||||||||||  || ||||||||||||||| |  |||   |||||  ||  |||||||||||||||||||||||||||||||||||||| |||    
T  345984 attcccacccttttctttgggaaaaattttctattcctaaaaacgttttatatccgagaataaaatttagtaaacttgtaacaaacatagacatgtgtat 345885  T
Q  966 ttctatc 972  Q
    | |||||    
T  345884 tcctatc 345878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 842 - 955
Target Start/End: Original strand, 2657590 - 2657707
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| |||||||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  2657590 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagta 2657689  T
Q  938 aacttgtaacaaacatag 955  Q
    ||||||||||||||||||    
T  2657690 aacttgtaacaaacatag 2657707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 668 - 755
Target Start/End: Original strand, 14170740 - 14170827
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  14170740 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttag 14170827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 665 - 754
Target Start/End: Complemental strand, 7053927 - 7053838
Alignment:
Q  665 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtattta 754  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||| |||| ||||||||||||||| |||||    
T  7053927 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaattta 7053838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 668 - 976
Target Start/End: Complemental strand, 14781955 - 14781663
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttagnnnnnnnnnnnn 767  Q
    ||||||||||||||  |||| |||||||||||||  ||||||||||| ||||||||||||||||  ||||||||||||||||||||||                
T  14781955 gtgtgtttgtttcat-tttaccaaatttattcctgggaataacattcattggaacataaagatgagaattttattccaaggtatttag----------aa 14781867  T
Q  768 nnnngatgtttgcttaacattataatattcacgggaaccatataaataggaaccataatatgtaattacacgataatttattctcatctccattgtaact 867  Q
        ||||||||||||||||||||||||||  |||||||||| || |||||   |||||| |||||||| |   ||||||||| |||||||    |||||    
T  14781866 aaaagatgtttgcttaacattataatattcctgggaaccataaaagtaggatttataataggtaattactcatgaatttattcccatctcc----taact 14781771  T
Q  868 ttattcccacccttttc--ttgggaaaattttctattcccaggaaca--ttatactcggaaataaaatttagtaaacttgtaacaaacatagacatgtat 963  Q
    |     |||||||||||  |||| |||| |||||||||||| || ||  ||||||   | |||||||||||||||||||||||||||||||   ||||||    
T  14781770 t-----ccacccttttcttttggaaaaaatttctattcccatgagcattttatacctaggaataaaatttagtaaacttgtaacaaacatatgtatgtat 14781676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 7344264 - 7344130
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca--ttatactcggaaataaaatttagta 937  Q
    ||||||||| ||||||||| | |||||||||||||||||||| |||||||||  |||||||||||||||||||  ||||||  || ||||||||||||||    
T  7344264 aatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacctgggaataaaatttagta 7344165  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||| |||| ||| || ||| |||||    
T  7344164 aacttgtaacaaatataggcatatacattcctatc 7344130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 842 - 972
Target Start/End: Original strand, 14170905 - 14171037
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagtaa 938  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| | ||||| |||| |||||||||||||||||  |||  | | |||||||||||||||    
T  14170905 aatttattc-catctccatgggaactttattcccacccttttccttggaaattttttctattcccaggaacattttatatccaggaataaaatttagtaa 14171003  T
Q  939 acttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||| ||| || ||| |||||    
T  14171004 acttgtaacaaacataggcatatagattcctatc 14171037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 664 - 755
Target Start/End: Complemental strand, 6706102 - 6706011
Alignment:
Q  664 aagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||| ||||||||||||||||| ||| |||||| ||| ||||||||||||||| || |||||||||  |||||||||| |||||||||||    
T  6706102 aagggtatgtttgtttcaagtttaccaattttatttctaggaataacattccttgaaatataaagatgagaattttattctaaggtatttag 6706011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 671 - 755
Target Start/End: Complemental strand, 21008322 - 21008238
Alignment:
Q  671 tgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||| |||||||||  || |||||||||| ||||||| |||||||||  ||||||||||||||| ||||||    
T  21008322 tgtttgtttcaagtttattaaatttatttttatgaataacatttcttggaatataaagatgagaattttattccaaggcatttag 21008238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 681 - 755
Target Start/End: Complemental strand, 7344827 - 7344753
Alignment:
Q  681 aagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||| |||  |||||||||| |||| ||||||    
T  7344827 aagtttatcaaatttattcctaggaataacattccttggaatataaatatgagaattttattctaaggaatttag 7344753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 667 - 755
Target Start/End: Complemental strand, 9762387 - 9762299
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    ||||||||||||||||||||| ||| ||||||  || |||||||||||||||||  ||||| |||  |||||||||| |||||||||||    
T  9762387 ggtgtgtttgtttcaagtttaccaagtttattattaggaataacattccttggattataaatatgtgaattttattcaaaggtatttag 9762299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 667 - 727
Target Start/End: Complemental strand, 11570131 - 11570071
Alignment:
Q  667 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaa 727  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  11570131 ggtgtctttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaa 11570071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 7053759 - 7053617
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccaccctttt-cttgggaaa-attttctattcccaggaaca----------ttatactcggaaataaa 929  Q
    ||||||||| ||||||||| | ||||||||||||||| |||| |||||||||  |||||||||||||||||||          |||||| | | ||||||    
T  7053759 aatttattcccatctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatacccaggaataaa 7053660  T
Q  930 atttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||||||||||| ||| || ||| |||||    
T  7053659 atttagtaaacttgtaacaaacataggcatatacattcctatc 7053617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 914
Target Start/End: Original strand, 8029193 - 8029267
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaa--ttttctattcccaggaacatt 914  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||| || |||  |||||||||||||||||||||    
T  8029193 aatttattcccatctccatgggaactttattcccacccttttctttgggaaattttttctattcccaggaacatt 8029267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 672 - 755
Target Start/End: Original strand, 8314623 - 8314706
Alignment:
Q  672 gtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||| ||||||||||||||||||||||  | ||||||| |||| || ||| | ||| ||||||||||| ||| |||||||    
T  8314623 gtttgttttaagtttatcaaatttattcctagaattaacattacttgcaatatacacatgtaaattttattctaagatatttag 8314706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 924 - 954
Target Start/End: Original strand, 8314889 - 8314919
Alignment:
Q  924 aataaaatttagtaaacttgtaacaaacata 954  Q
    |||||||||||||||||||||||||||||||    
T  8314889 aataaaatttagtaaacttgtaacaaacata 8314919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 922 - 964
Target Start/End: Complemental strand, 9760467 - 9760425
Alignment:
Q  922 gaaataaaatttagtaaacttgtaacaaacatagacatgtata 964  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||    
T  9760467 gaaataaaatttagtaaacttataacaaaaataggcatgtata 9760425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 931 - 972
Target Start/End: Original strand, 8029316 - 8029357
Alignment:
Q  931 tttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||||||||||||||| ||| || |||||||||    
T  8029316 tttagtaaacttgtaacaaacataggcatatacatttctatc 8029357  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 894 - 972
Target Start/End: Complemental strand, 21008151 - 21008071
Alignment:
Q  894 ttttctattcccaggaacatt--atactcggaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatc 972  Q
    ||||||||||||| |||||||  ||  |||| ||||||||||||||||| ||||||||| | || ||| ||||||| ||||    
T  21008151 ttttctattcccaagaacatttcatgttcgggaataaaatttagtaaacctgtaacaaatagaggcatatatatttttatc 21008071  T

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Target: scaffold0238 (Bit Score: 68; Significance: 8e-30; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 842 - 971
Target Start/End: Complemental strand, 23477 - 23344
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttcttgggaaaat--tttctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    |||||||| |||||| ||| | ||||||||||||||| ||||||| ||||||   ||| |||||||||||| |||  |||||||  ||||||||||||||    
T  23477 aatttattttcatcttcatggaaactttattcccaccgttttctttggaaaaaaatttatattcccaggaatattttatactcgtgaataaaatttagta 23378  T
Q  938 aacttgtaacaaacatagacatgtatatttctat 971  Q
    ||||||||||||||||||||||||||||||||||    
T  23377 aacttgtaacaaacatagacatgtatatttctat 23344  T

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Target: scaffold0189 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 972
Target Start/End: Complemental strand, 29133 - 28999
Alignment:
Q  842 aatttattctcatctccattgtaactttattcccacccttttc-ttgggaaaatttt-ctattcccaggaacatt--atactcggaaataaaatttagta 937  Q
    ||||||||||||| ||||| | ||||||||||||||||||||| ||| |||| |||| |||||||||||||||||  |||| ||| ||||||||||||||    
T  29133 aatttattctcatttccatgggaactttattcccacccttttccttgagaaattttttctattcccaggaacattttatacccgggaataaaatttagta 29034  T
Q  938 aacttgtaacaaacatagacatgtatatttctatc 972  Q
    |||||||||||||||||| ||| || ||| |||||    
T  29033 aacttgtaacaaacataggcatatacattcctatc 28999  T

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Target: scaffold0189; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 668 - 755
Target Start/End: Complemental strand, 29298 - 29211
Alignment:
Q  668 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaacataaagatggaaattttattccaaggtatttag 755  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||  |||||| |||||||| | ||||||||||||||| ||||||    
T  29298 gtgtgtttattttaagtttatcaaatttattcctatgaataacattttttggaatataaagataggaattttattccaaggaatttag 29211  T

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