View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4354-Insertion-15 (Length: 240)
Name: NF4354-Insertion-15
Description: NF4354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4354-Insertion-15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 295240 - 295477
Alignment:
| Q |
8 |
taagtatagtggtaacagttggagttggatggagcaaagaagccatattgttatg-----atatgatatgatgctcattcattcattcgttccaagttca |
102 |
Q |
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| T |
295240 |
taagtatagtggtaacagttggagttggatggagcaaagaagccatattgttatgatatgatatgatatgatgctcattcattcattcgttccaagttca |
295339 |
T |
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| Q |
103 |
aactacaattaacatagtaacatcatcataggcacctctcttgccacgtcttcctgttttattttatctctctttgcttggtccaaaattaaggcatcaa |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
295340 |
aactacaattaacatagtaacatcatcataggcacctctcttgccacgtcttcctgttttattttatctctctttgcttggtccaaaattaaggcatcaa |
295439 |
T |
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| Q |
203 |
ccttagccagatatatacatacatacttgcatcgtaca |
240 |
Q |
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||||||||||||||| |||||||||||||||||||||| |
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| T |
295440 |
ccttagccagatataaacatacatacttgcatcgtaca |
295477 |
T |
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