View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4354-Insertion-8 (Length: 453)
Name: NF4354-Insertion-8
Description: NF4354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4354-Insertion-8 |
 |  |
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| [»] chr4 (7 HSPs) |
 |  |
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| [»] scaffold0039 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr4 (Bit Score: 438; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 8 - 453
Target Start/End: Original strand, 33814598 - 33815043
Alignment:
| Q |
8 |
tttttaacgtcctataataggatccaaaacaggatccagctcttgctcccctaccaagttgaactaggcatctgataccacttgttggggagtctgggta |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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|
| T |
33814598 |
tttttaacgtcctataataggatccaaaacaggatccagctcttgctcccctaccaagttgaactagggatctgataccacttgttggggagtctgggta |
33814697 |
T |
 |
| Q |
108 |
agtcgggaacaacaacagggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacct |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
33814698 |
agtcgggaacaacaacagggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacct |
33814797 |
T |
 |
| Q |
208 |
ctcttatatatatccaacattttatccattgacatgcgatgtgagacttgaccaacttacacttgtactcaacatgaagtctctcatcccaaccatgttt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
33814798 |
ctcttatatatatccaacattttatccattgacatgcgatgtgagacttgaccaacttacacttgtactcaacatgaagtctctcatcccaaccatgttt |
33814897 |
T |
 |
| Q |
308 |
tctcatctcaaactcgagacgttgcttaagagatccaagtctaatttagtatattgaagtatttgaagaaagaattaggtacctatgctcaagtcatatc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33814898 |
tctcatctcaaactcgagacgttgcttaagagatccaaatctaatttagtatattgaagtatttgaagaaagaattaggtacctatgctcaagtcatatc |
33814997 |
T |
 |
| Q |
408 |
cacggtttttgagctctctatattcctgacaaagagcacaagtttc |
453 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33814998 |
cacggtttttgagctctctatattcctgacaaagagcacaagtttc |
33815043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 376 - 453
Target Start/End: Original strand, 33810057 - 33810134
Alignment:
| Q |
376 |
aaagaattaggtacctatgctcaagtcatatccacggtttttgagctctctatattcctgacaaagagcacaagtttc |
453 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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|
| T |
33810057 |
aaagaattaggtgcctatgctcaagtcatatccacggtttttgagttctctatattcctgacaaagagcacaagtttc |
33810134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 11307334 - 11307396
Alignment:
| Q |
156 |
agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
|||||||| ||||||||||||||| |||| | || ||||||||| ||| |||||||||||||| |
|
|
| T |
11307334 |
agacaccacatctccacccaaaacattaaggcatcaggtatacgtgtcccctctcttatatat |
11307396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 47680735 - 47680673
Alignment:
| Q |
156 |
agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||| | || ||||||| ||||| |||||| ||||||| |
|
|
| T |
47680735 |
agacaccacatctccacccaaaaccttaaggcatcaggtatatgggtctcctctcatatatat |
47680673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 38534542 - 38534496
Alignment:
| Q |
141 |
ggccacaagagagggagacaccatatctccacccaaaaccttaatgt |
187 |
Q |
| |
|
|||||||| |||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
38534542 |
ggccacaaaagagggaggcactaaatctccacccaaaaccttaatgt |
38534496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 20090545 - 20090618
Alignment:
| Q |
145 |
acaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
||||||| ||||||||| | || ||| |||||||| ||||| |||||||||| |||||||||||||||||| |
|
|
| T |
20090545 |
acaagagggggagacacgacgtcgccatccaaaaccctaatgcattaggtatataagtcacctctcttatatat |
20090618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 47681251 - 47681223
Alignment:
| Q |
156 |
agacaccatatctccacccaaaaccttaa |
184 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
47681251 |
agacaccatatctccacccaaaaccttaa |
47681223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 28296058 - 28296130
Alignment:
| Q |
143 |
ccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttata |
215 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
28296058 |
ccacaagagagggagacaccacatctccacccaaaaccttaagagattaggtatatgggtcacctctcttata |
28296130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 27856234 - 27856164
Alignment:
| Q |
165 |
atctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattttatccatt |
237 |
Q |
| |
|
||||||||||||||| |||| | |||||||||| | | |||||||||||| ||||||||||||||| ||||| |
|
|
| T |
27856234 |
atctccacccaaaactttaaggcattaggtatatgagccacctctcttat--atatccaacattttacccatt |
27856164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 109 - 261
Target Start/End: Complemental strand, 11200082 - 11199934
Alignment:
| Q |
109 |
gtcgggaacaacaacagggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctc |
208 |
Q |
| |
|
|||||||||||||||| | ||| || |||| | |||||| |||||||||| ||| |||||||||||||||||||| | |||||| ||| | |||||||| |
|
|
| T |
11200082 |
gtcgggaacaacaacaagtcaa--tgatccaggaccacaacagagggagacgccacatctccacccaaaaccttaaggcattaggcatatgagtcacctc |
11199985 |
T |
 |
| Q |
209 |
tcttatatatatccaacattttatccattgacatgcgatgtgagacttgacca |
261 |
Q |
| |
|
|||||| ||||||||||||||| | ||| | | || ||||||||||| |||| |
|
|
| T |
11199984 |
tcttat--atatccaacattttacctattcataggcaatgtgagacttaacca |
11199934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 26231700 - 26231762
Alignment:
| Q |
157 |
gacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatata |
219 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| | |||||| ||||| ||||||||||||||| |
|
|
| T |
26231700 |
gacaccacatctccacccaaaaccttaaggtaattggtatatgggtcccctctcttatatata |
26231762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 38637662 - 38637545
Alignment:
| Q |
118 |
aacaacagggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatata |
217 |
Q |
| |
|
||||||||| | ||||| |||| | | |||||||||||||| || |||||||||||| ||||||| | |||||||||| ||||||||| || |||| |
|
|
| T |
38637662 |
aacaacaggcccaaatgctccaggactacaagagagggagatgccgcatctccacccaataccttaaggcattaggtatataggtcacctcact--tata |
38637565 |
T |
 |
| Q |
218 |
tatccaacattttatccatt |
237 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
38637564 |
tggccaacattttatccatt |
38637545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 11766012 - 11766100
Alignment:
| Q |
147 |
aagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattttatccatt |
237 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||| | ||||||| | ||||| |||||| |||| ||||||||||||| ||||| |
|
|
| T |
11766012 |
aagagagggagacgccacatctccacccaaaaccttaaggcattaggttaataggtcaactctct--tataaatccaacattttacccatt |
11766100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 48273345 - 48273306
Alignment:
| Q |
144 |
cacaagagagggagacaccatatctccacccaaaacctta |
183 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
48273345 |
cacaagagagggagacgccatatctccacccaaaaactta |
48273306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 14571878 - 14571957
Alignment:
| Q |
141 |
ggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatat |
220 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| |||||||||||| | |||| |||||||||| ||||||||||||||| |
|
|
| T |
14571878 |
ggccacaagagagggagaaaccacatctccaaccaaaaccttaaaccaataggaatacgggtcatctctcttatatatat |
14571957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 8252608 - 8252704
Alignment:
| Q |
131 |
aatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattt |
229 |
Q |
| |
|
||||||||||| || ||||||||| ||||||| ||||||| ||||||| |||| | ||||||||||| || |||||||||||| |||||||||||| |
|
|
| T |
8252608 |
aatgttccaagatcataagagagggcgacaccacatctccatccaaaactttaaggcgttaggtatacgagttacctctcttata--tatccaacattt |
8252704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 19548256 - 19548196
Alignment:
| Q |
158 |
acaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| |||| ||||| |||||||||||||| |
|
|
| T |
19548256 |
acaccacatctccacccaaaaccttaagacattagatatatgggtctcctctcttatatat |
19548196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 43407755 - 43407669
Alignment:
| Q |
143 |
ccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattt |
229 |
Q |
| |
|
|||||||| |||||||| || ||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||||| |
|
|
| T |
43407755 |
ccacaagatagggagactccggatctccacccaaaaccttacgtcattaggtatatgagtcacctttcttatatatatccaacattt |
43407669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 54328774 - 54328839
Alignment:
| Q |
143 |
ccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctc |
208 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||| |||| | ||||||||| |||||||||| |
|
|
| T |
54328774 |
ccacaagagacggagacaccacatctccacccaaaatcttatggcgttaggtatatgggtcacctc |
54328839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 40196155 - 40196217
Alignment:
| Q |
156 |
agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
|||| |||||||||||||||||||||||| | | ||||||| ||||| ||||||||| |||| |
|
|
| T |
40196155 |
agactccatatctccacccaaaaccttaaggcgtcaggtatatgggtcccctctcttacatat |
40196217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 43481702 - 43481640
Alignment:
| Q |
156 |
agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
|||| ||| ||||||||| |||| ||||||| || ||||||| ||||| |||||||||||||| |
|
|
| T |
43481702 |
agacgccacatctccacctaaaatcttaatgcatcaggtatatgggtcccctctcttatatat |
43481640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 43978628 - 43978681
Alignment:
| Q |
165 |
atctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
|||||||||||||||||||| | | |||||||| | ||| |||||||||||||| |
|
|
| T |
43978628 |
atctccacccaaaaccttaaggcaataggtatatgagtctcctctcttatatat |
43978681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 23162016 - 23161956
Alignment:
| Q |
158 |
acaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
|||||| |||||||||||||| ||||| | || |||||| | |||||||||||||||||| |
|
|
| T |
23162016 |
acaccacatctccacccaaaatcttaaggcatcgggtatatgagtcacctctcttatatat |
23161956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 42115258 - 42115199
Alignment:
| Q |
147 |
aagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacc |
206 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||||| |
|
|
| T |
42115258 |
aagagagggagacaccacatctccacccaaaaccttaatgcattatgtatatggttcacc |
42115199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 5073127 - 5073024
Alignment:
| Q |
125 |
gggcaaaatgttccaaggccacaagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaa |
224 |
Q |
| |
|
|||| ||||| |||| | ||||||||||||||||| || |||||||||||||||||||| | |||| ||||| | | | |||||||||| |||||||| |
|
|
| T |
5073127 |
gggctaaatgctccaggaccacaagagagggagacgacacatctccacccaaaaccttaaggcattacgtatatgagacgcctctcttat--atatccaa |
5073030 |
T |
 |
| Q |
225 |
catttt |
230 |
Q |
| |
|
|||||| |
|
|
| T |
5073029 |
catttt |
5073024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 11806794 - 11806729
Alignment:
| Q |
166 |
tctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacatttta |
231 |
Q |
| |
|
||||||||||||||||||| | | ||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
11806794 |
tctccacccaaaaccttaaggcacaaggtatatgggtcacctctcttatatatacacaacatttta |
11806729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 5981486 - 5981565
Alignment:
| Q |
156 |
agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacattttatccatt |
237 |
Q |
| |
|
|||||||| || ||||||||||||||||| | || ||||| | ||||| ||||||||||| |||||||| |||| |||||| |
|
|
| T |
5981486 |
agacaccacatttccacccaaaaccttaaggcatcaggtacatgggtcccctctcttata--tatccaacgttttctccatt |
5981565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 12156439 - 12156399
Alignment:
| Q |
157 |
gacaccatatctccacccaaaaccttaatgtattaggtata |
197 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||||| |
|
|
| T |
12156439 |
gacaccacatctccaccctaaaccttaacgtattaggtata |
12156399 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 11776400 - 11776453
Alignment:
| Q |
165 |
atctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||| ||||| |||||||||||||| |
|
|
| T |
11776400 |
atctccacccaaaaccttaaggtattatgtatatgggtcccctctcttatatat |
11776453 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 33730086 - 33730158
Alignment:
| Q |
146 |
caagagagggagacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatat |
218 |
Q |
| |
|
||||||| |||| ||||| ||||||| |||||||||||||| ||||| | || |||||||||||||| ||||| |
|
|
| T |
33730086 |
caagagatggaggcaccacatctccatccaaaaccttaatgcattagctctatgggtcacctctcttttatat |
33730158 |
T |
 |
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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 33730413 - 33730456
Alignment:
| Q |
135 |
ttccaaggccacaagagagggagacaccatatctccacccaaaa |
178 |
Q |
| |
|
||||||| ||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
33730413 |
ttccaagaccacaagagagggagacgccacatctccacccaaaa |
33730456 |
T |
 |
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Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 29137 - 29063
Alignment:
| Q |
156 |
agacaccatatctccacccaaaaccttaatgtattaggtatacgggtcacctctcttatatatatccaacatttt |
230 |
Q |
| |
|
|||||||| |||||||||||||| ||||| || || |||| | ||| |||||||||||||||||||||||||| |
|
|
| T |
29137 |
agacaccacatctccacccaaaatcttaagacatcagatatatgagtcccctctcttatatatatccaacatttt |
29063 |
T |
 |
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