View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4358_low_2 (Length: 412)
Name: NF4358_low_2
Description: NF4358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4358_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 18 - 397
Target Start/End: Complemental strand, 37027722 - 37027338
Alignment:
| Q |
18 |
aagtggttgagaagaaggagtaccatatgaagaatctaagtctgagtagccaaatgatgaaaatttgagtttcttccatgatttgatggagtagcttcta |
117 |
Q |
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| T |
37027722 |
aagtggttgagaagaaggagtaccatatgaagaatctaagtctgagtagccaaatgatgaaaatttgagtttcttccatgatttgatggagtagcttcta |
37027623 |
T |
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| Q |
118 |
ctacctcttccatgatttatagcatctgcaaatttaacaaaagttacatatgttttataaattattacacaaactaaa-----gttacatagatagatta |
212 |
Q |
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| T |
37027622 |
ctacctcttccatgatttatagcatctgcaaatttaacaaaagttacatatgttttattaattactacacaaattaaactgaagttacatagatagatta |
37027523 |
T |
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| Q |
213 |
gtatatgaaataatcatataatttatatgcatggtttaccacacaaagggaaaagagtggaaactagcatcaagaggcaaagatgtgcaatgttgaatct |
312 |
Q |
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| T |
37027522 |
gtatatgaaataatcatataatttatatgcatggtttaccacacaaagggaaaagagtggaaactagcatcaagaggcaaagatgtgcaatgttgaatct |
37027423 |
T |
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| Q |
313 |
aaggatgcaagctcttgactccattggaattggattaacactaatgcacaaaattagaggttgaaatttgaaaatatcctcacag |
397 |
Q |
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| T |
37027422 |
aaggatgtaagctcttgactccattggaattggattaacactaatgcacaaaattagaggttgaaatttgaaaatatcctcacag |
37027338 |
T |
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