View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4359_high_2 (Length: 320)
Name: NF4359_high_2
Description: NF4359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4359_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 293
Target Start/End: Complemental strand, 7629990 - 7629715
Alignment:
| Q |
19 |
taaatgttccaggttaggtcaaaacacataggagtaatttataagacaaaattattttgttcaagtttggagaattcacttcatctcccgattcaggtat |
118 |
Q |
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| T |
7629990 |
taaatgttccaggttaggtcaaaacacataggagtaatttataagacaaaattattttgttcaagtttggagaattcacttcatctcccgattcaggtat |
7629891 |
T |
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| Q |
119 |
cctttgtaggcaccgtatctagattttgtttgtgtcatcgtcataatatagatcaaataatgctcaagaattcaattttgttgggaccaggccaggtgtc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7629890 |
cctttgtaggcaccgtatctagattttgtttgtgtcatggtcataatatagatcaaataatgctcaagaattcaattttgttgggaccaggccaggtgtc |
7629791 |
T |
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| Q |
219 |
ccttaaagtatatgaagtccatgaaatatttgaa-aaaatactacaacttgttccatgtcagttcattaacgttta |
293 |
Q |
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|| | || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
7629790 |
cccttaaatatatgaagtccatgaaatatttgaaaaaaatactacaacttgttccatgtcagttcattaacgttta |
7629715 |
T |
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