View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4360-Insertion-17 (Length: 49)
Name: NF4360-Insertion-17
Description: NF4360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4360-Insertion-17 |
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| [»] chr2 (2 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 38; Significance: 0.0000000000002; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 11986844 - 11986885
Alignment:
| Q |
8 |
cacctcagaaactctcacaacttcaacctcatcctccgtcac |
49 |
Q |
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| T |
11986844 |
cacctcagaaactctgacaacttcaacctcatcctccgtcac |
11986885 |
T |
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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 12011912 - 12011949
Alignment:
| Q |
8 |
cacctcagaaactctcacaacttcaacctcatcctccg |
45 |
Q |
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| T |
12011912 |
cacctcaaaaactctcacaacttcaacctcatcctccg |
12011949 |
T |
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