View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4360_high_1 (Length: 265)
Name: NF4360_high_1
Description: NF4360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4360_high_1 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 26493426 - 26493190
Alignment:
| Q |
1 |
tcatcaccaacaccttcaccagtttctccatcagacagtccctcaaattcaccatcaccatcattttttcttccatcactattaacatcaccagaacttt |
100 |
Q |
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| T |
26493426 |
tcatcaccaacaccttcaccagtttctccatcagaaagtccctcaaattcaccatca------ttttttcttccatcactattaacatcaccagaacttt |
26493333 |
T |
|
| Q |
101 |
ctccttcaccatcatcctcaccttcaccttcacctttacctgtgatatcaccttcccctacagttctatctacaccaccacattctagttggatttctgc |
200 |
Q |
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| T |
26493332 |
ccccttcaccatcatcctcaccttcaccttcacct------gtgatatcaccttcccctacagttctatctacaccaccacattctagttggatttctgc |
26493239 |
T |
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| Q |
201 |
accttccccagctccatcttcaaaccaaatgaattcacaaagttcaaac |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26493238 |
accttccccagctccatcttcaaaccaaatgaattcacaaagttcaaac |
26493190 |
T |
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