View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4361_low_1 (Length: 463)
Name: NF4361_low_1
Description: NF4361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4361_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 17 - 451
Target Start/End: Complemental strand, 24047173 - 24046738
Alignment:
| Q |
17 |
aaattaccgagttcggttcctaatcataaatgaaaaaatcaa-tttcgaagcattcacttactgtggggtcattggactcatcgcctacgtcagcaagac |
115 |
Q |
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||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
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| T |
24047173 |
aaattaccgagttcgattcctaatcataaatgaaaaaattaaatttcgaagcattcacttactgtggggtcatcggactcattgcctacgtcagcaagac |
24047074 |
T |
|
| Q |
116 |
actcatcattggggctgtaaatcccaaaaatagaaccagttgaaactgcagcatcaatattcgatgaaccatcaagtggatcaaagaccacaatgtagtt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24047073 |
actcatcattggggctgtaaatcccaaaaatagaaccagttgaaactgcagcatcaatattcgatgaaccatcaagtggatcaaagaccacaatgtagtt |
24046974 |
T |
|
| Q |
216 |
tcctgaataactctcttctactgccactggcacatcctcttcctctgatgctataatccctgtcctcccacttgacctcaaacaatttgagaatacctga |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24046973 |
tcctgaataactctcttctactgccactggcacatcctcttcctctgatgctataatccctgtcctcccacttgacctcaaacaatttgagaatacctga |
24046874 |
T |
|
| Q |
316 |
acnnnnnnntagaaaacaatacattgtctattaacattagtagttacctaagtaaaactttaagtttaagtacatacatagttggtcataaatgtgacca |
415 |
Q |
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|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
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| T |
24046873 |
acaaaaaaatagaaaacaatacattgtctattaacattagtagctacctaagtaaaactttaagtttaagtacatacatacttgatcataaatgtgacca |
24046774 |
T |
|
| Q |
416 |
agagtaaacccttctaatacactcctttagcatatt |
451 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
24046773 |
agagtaaacccttctaatacactcctttagcatatt |
24046738 |
T |
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