View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4362-Insertion-1 (Length: 1100)

Name: NF4362-Insertion-1
Description: NF4362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4362-Insertion-1
NF4362-Insertion-1
[»] chr2 (18 HSPs)
chr2 (108-198)||(26316900-26316990)
chr2 (8-89)||(32838928-32839009)
chr2 (8-89)||(22388137-22388218)
chr2 (8-88)||(40756911-40756991)
chr2 (10-89)||(23366988-23367067)
chr2 (8-54)||(14779972-14780018)
chr2 (9-81)||(3519105-3519177)
chr2 (8-47)||(19976525-19976564)
chr2 (8-89)||(1102698-1102779)
chr2 (8-81)||(36447455-36447528)
chr2 (8-81)||(37284526-37284598)
chr2 (8-88)||(1646484-1646564)
chr2 (8-76)||(34242171-34242239)
chr2 (8-88)||(37673743-37673823)
chr2 (942-1013)||(1331487-1331558)
chr2 (950-1013)||(36500145-36500208)
chr2 (969-1038)||(26316648-26316717)
chr2 (8-89)||(39938367-39938448)
[»] chr8 (21 HSPs)
chr8 (10-89)||(35866812-35866891)
chr8 (8-89)||(3585648-3585729)
chr8 (8-88)||(28568115-28568195)
chr8 (8-88)||(28575708-28575788)
chr8 (8-89)||(11646324-11646405)
chr8 (8-89)||(28562618-28562699)
chr8 (8-89)||(36068277-36068358)
chr8 (8-89)||(43275398-43275479)
chr8 (8-88)||(7147110-7147190)
chr8 (8-88)||(40058303-40058383)
chr8 (8-88)||(40918731-40918811)
chr8 (955-1013)||(45366851-45366909)
chr8 (8-89)||(2539929-2540010)
chr8 (8-89)||(30999523-30999604)
chr8 (8-88)||(37345768-37345848)
chr8 (8-89)||(11174222-11174303)
chr8 (8-77)||(27563878-27563947)
chr8 (8-75)||(10180881-10180948)
chr8 (955-1010)||(11219469-11219524)
chr8 (8-81)||(27035192-27035265)
chr8 (8-81)||(26628823-26628896)
[»] chr4 (18 HSPs)
chr4 (8-88)||(19692919-19692999)
chr4 (8-88)||(19703504-19703584)
chr4 (8-89)||(32543676-32543757)
chr4 (8-81)||(6128956-6129029)
chr4 (8-89)||(21310618-21310699)
chr4 (8-89)||(22321267-22321348)
chr4 (8-88)||(12071757-12071837)
chr4 (8-91)||(24706244-24706327)
chr4 (8-89)||(14261241-14261322)
chr4 (12-89)||(25704852-25704929)
chr4 (8-81)||(40122494-40122567)
chr4 (8-88)||(50839031-50839111)
chr4 (8-78)||(18507276-18507346)
chr4 (8-89)||(44569034-44569115)
chr4 (8-86)||(21661537-21661615)
chr4 (8-86)||(21670301-21670379)
chr4 (942-996)||(23449496-23449550)
chr4 (8-78)||(50768059-50768129)
[»] chr6 (12 HSPs)
chr6 (8-91)||(13757404-13757487)
chr6 (8-89)||(8235822-8235903)
chr6 (10-89)||(15064694-15064773)
chr6 (8-89)||(8626679-8626760)
chr6 (8-89)||(17942640-17942721)
chr6 (8-88)||(4129623-4129703)
chr6 (8-88)||(7761497-7761577)
chr6 (8-88)||(29260389-29260469)
chr6 (10-89)||(1605777-1605856)
chr6 (10-89)||(26860963-26861042)
chr6 (955-1013)||(8064989-8065047)
chr6 (8-89)||(20398237-20398318)
[»] chr1 (19 HSPs)
chr1 (8-81)||(24876758-24876831)
chr1 (8-89)||(51064753-51064834)
chr1 (8-89)||(284530-284611)
chr1 (8-81)||(14925659-14925732)
chr1 (8-89)||(40783656-40783737)
chr1 (8-88)||(321823-321903)
chr1 (8-88)||(23045279-23045359)
chr1 (8-88)||(34458724-34458804)
chr1 (963-1013)||(18310467-18310517)
chr1 (11-81)||(25929298-25929368)
chr1 (8-89)||(23526436-23526517)
chr1 (8-89)||(24771905-24771986)
chr1 (8-88)||(31003787-31003867)
chr1 (8-88)||(47037852-47037932)
chr1 (10-89)||(23166850-23166929)
chr1 (942-1013)||(24630442-24630513)
chr1 (593-688)||(33781555-33781649)
chr1 (8-53)||(40261320-40261365)
chr1 (8-89)||(40562285-40562366)
[»] chr5 (17 HSPs)
chr5 (8-88)||(26168105-26168185)
chr5 (10-80)||(734347-734417)
chr5 (8-89)||(30720491-30720572)
chr5 (8-88)||(36561099-36561179)
chr5 (8-88)||(40886610-40886690)
chr5 (8-89)||(10285057-10285138)
chr5 (8-89)||(12806852-12806933)
chr5 (8-88)||(25683229-25683309)
chr5 (8-71)||(11795300-11795363)
chr5 (20-89)||(11319765-11319834)
chr5 (8-89)||(37900622-37900703)
chr5 (8-81)||(39071079-39071152)
chr5 (8-91)||(25773846-25773929)
chr5 (955-1010)||(28224388-28224443)
chr5 (10-57)||(30402993-30403040)
chr5 (8-90)||(1056623-1056703)
chr5 (8-89)||(23097723-23097804)
[»] chr3 (19 HSPs)
chr3 (8-88)||(18355868-18355948)
chr3 (8-81)||(26783666-26783739)
chr3 (8-89)||(29375329-29375410)
chr3 (8-89)||(48436421-48436502)
chr3 (8-88)||(13365040-13365120)
chr3 (8-88)||(46694110-46694190)
chr3 (8-90)||(36881477-36881559)
chr3 (8-89)||(19241667-19241748)
chr3 (10-77)||(54086751-54086818)
chr3 (541-633)||(24979316-24979405)
chr3 (8-81)||(6901758-6901830)
chr3 (8-81)||(23087938-23088011)
chr3 (942-1010)||(2565812-2565880)
chr3 (8-88)||(3383273-3383353)
chr3 (8-88)||(32834989-32835069)
chr3 (8-47)||(37293605-37293644)
chr3 (8-89)||(13703409-13703490)
chr3 (9-79)||(24064418-24064488)
chr3 (8-81)||(48820537-48820610)
[»] chr7 (11 HSPs)
chr7 (8-89)||(27814008-27814089)
chr7 (589-678)||(35666549-35666639)
chr7 (8-81)||(36453131-36453204)
chr7 (8-88)||(16662290-16662370)
chr7 (8-88)||(17636650-17636730)
chr7 (8-90)||(25614351-25614433)
chr7 (8-89)||(47110647-47110728)
chr7 (10-91)||(16360576-16360656)
chr7 (8-88)||(10981705-10981785)
chr7 (943-1010)||(40849362-40849429)
chr7 (8-89)||(40349159-40349239)
[»] scaffold0168 (1 HSPs)
scaffold0168 (8-89)||(7865-7946)
[»] scaffold1770 (1 HSPs)
scaffold1770 (8-88)||(358-438)


Alignment Details
Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 26316990 - 26316900
Alignment:
Q  108 agcatatcggaaatatatgaatatataaacaattaacacaaattgataattagaggcacattcatatcatcgcaagtcacgtaataagtca 198  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26316990 agcatatcggaaacatatgaatagataaacaattaacacaaattgataattagaggcacattcatatcatcacaagtcacgtaataagtca 26316900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 32839009 - 32838928
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||  || || |||| |||||||||| | ||||||||||    
T  32839009 gcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattcttcaaaaacgacatgtattgtgaagcagatggagtat 32838928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 22388218 - 22388137
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  22388218 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 22388137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 40756991 - 40756911
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||| |||| ||||||||||| |||||| || |  |||||||||| ||||||||| ||||||    
T  40756991 gcattgaaacttgaaagtgacaactaaagtgaaacaaaattattctccaaaatggacaagtattatgaaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 23366988 - 23367067
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  23366988 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 23367067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 14779972 - 14780018
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctc 54  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14779972 gcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 14780018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 3519105 - 3519177
Alignment:
Q  9 cattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    |||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| |||||||||    
T  3519105 cattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacgga 3519177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 19976525 - 19976564
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaat 47  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  19976525 gcattgaaacttgaaagtgacaagtaaaatgaaacaaaat 19976564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 1102698 - 1102779
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||| ||||   ||||||||||| ||||||| | |  |||||||||| ||||||||| |||||||    
T  1102698 gcattgaaacttgaaagtgacgagtattgtgaaacaaaattattctctcaaatggacaagtattatgaaacggagggagtat 1102779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 36447455 - 36447528
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||| | ||||||||| | |||| ||||||||||| ||||||||| |  |||| |||||||||||||||    
T  36447455 gcattgaaatttgaaagtgacgaataaagtgaaacaaaattattctctaaaagcgacatgtattgtgaaacgga 36447528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 37284598 - 37284526
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| |||| ||||||||||| ||||||||||| |||||| || |  || |||||||||||||||||    
T  37284598 gcattgaaacttgaaaatgacaagtaaagtgaaacaaaattattctccaaaagaga-aagtattgtgaaacgga 37284526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 1646484 - 1646564
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||||||| |||||   ||||||||||| ||||||||| |  |||| ||||| ||||||||| ||||||    
T  1646484 gcattgaaacttgaaagtgataagtattgtgaaacaaaattattctctaaaatggacaggtattatgaaacggagggagta 1646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 34242171 - 34242239
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaa 76  Q
    ||||| |||||  |||||||| |||||||||||||||||| |||||||||  | |||| ||||||||||    
T  34242171 gcattaaaacttaaaagtgaccagtaaaatgaaacaaaattattctctaaacacgacatgtattgtgaa 34242239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 37673823 - 37673743
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| | ||||||||||||   ||||||||| | ||||||||| |  |||||||||| ||||||||| ||||||    
T  37673823 gcattgaaacttggaagtgacaagtattttgaaacaaagttattctctaaaatggacaagtattatgaaacggaaggagta 37673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 942 - 1013
Target Start/End: Complemental strand, 1331558 - 1331487
Alignment:
Q  942 gcatttaatttgtatgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttttat 1013  Q
    |||||| ||||| |||||||||||||| |||||  |||||| |||| |||||||| ||||||  ||||||||    
T  1331558 gcatttgatttggatgtattcggatcacttttttcctcaaccacatggtttggtttggtttgccgtttttat 1331487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 950 - 1013
Target Start/End: Original strand, 36500145 - 36500208
Alignment:
Q  950 tttgtatgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttttat 1013  Q
    |||| |||||||||||||||||||| |||||||  ||| |||||||| |||||  |||||||||    
T  36500145 tttggatgtattcggatcatttttttactcaaccgcatagtttggtttggttttcggtttttat 36500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 969 - 1038
Target Start/End: Complemental strand, 26316717 - 26316648
Alignment:
Q  969 ttttttgactcaacaacattgtttggttaggtttgtggtttttatgtaccaatcgaactaaaatggtact 1038  Q
    |||||| |||||||   |||||||||||||||||||||||||  | || ||| |||||||||| ||||||    
T  26316717 tttttttactcaactttattgtttggttaggtttgtggttttattttatcaagcgaactaaaacggtact 26316648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 39938367 - 39938448
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||| |||||  |||||||||||||   ||||||||||| ||||||||| |  |||||||||| | ||||||| |||||||    
T  39938367 gcattaaaacttaaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattataaaacggagggagtat 39938448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 1e-22; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 35866812 - 35866891
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| || |  ||||||||||||||||||||||||||||    
T  35866812 attgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaatagacaagtattgtgaaacggatggagtat 35866891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 3585648 - 3585729
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| |||||||||||||||||    
T  3585648 gcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatagacaagtattatgaaacggatggagtat 3585729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 28568115 - 28568195
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    |||||||||||  ||||||||||||||||||||||||||| |||||| || |  |||||||||||||||| ||| ||||||    
T  28568115 gcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctccaaaatggacaagtattgtgaaatggagggagta 28568195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 28575708 - 28575788
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    |||||||||||  ||||||||||||||||||||||||||| |||||| || |  |||||||||||||||| ||| ||||||    
T  28575708 gcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctccaaaatggacaagtattgtgaaatggagggagta 28575788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 11646405 - 11646324
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  11646405 gcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 11646324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 28562618 - 28562699
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||  || |  || ||||||||||| ||||| |||||||    
T  28562618 gcattgaaacttgaaagtgacaagtaaaatgaaacaaaataattcttcaaaatggataagtattgtgagacggagggagtat 28562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 36068277 - 36068358
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  36068277 gcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 36068358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 43275479 - 43275398
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  43275479 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 43275398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 7147110 - 7147190
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  7147110 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 7147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 40058383 - 40058303
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  40058383 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 40058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 40918811 - 40918731
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  40918811 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 40918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 955 - 1013
Target Start/End: Complemental strand, 45366909 - 45366851
Alignment:
Q  955 atgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttttat 1013  Q
    |||||||||| ||||||||| |||||||||||| |||||||| |||||||| |||||||    
T  45366909 atgtattcgggtcatttttttactcaacaacatagtttggttcggtttgtgatttttat 45366851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 2540010 - 2539929
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||| ||| |  |||||||||| ||||||||| |||||||    
T  2540010 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatggacaagtattatgaaacggaaggagtat 2539929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 30999604 - 30999523
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| |||||| |||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  30999604 gcattgaaacttgaaagtaacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 30999523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 37345768 - 37345848
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||| |||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  37345768 gcattgaaacttgaaaatgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggaaggagta 37345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 11174303 - 11174222
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatg-acaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||| ||| |||| ||||||||| ||||||||| |||||||    
T  11174303 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaa-aatgaacaagtattatgaaacggagggagtat 11174222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 27563947 - 27563878
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaa 77  Q
    ||||||||||| ||||||||||||||| ||||||||||||  ||||| || |  ||||||||| ||||||    
T  27563947 gcattgaaacttgaaagtgacaagtaatatgaaacaaaattgttctccaaaagcgacaagtatcgtgaaa 27563878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 10180948 - 10180881
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtga 75  Q
    ||||||||||| |||||||||||||||  |||||||||||  ||||| || | ||| |||||||||||    
T  10180948 gcattgaaacttgaaagtgacaagtaatgtgaaacaaaattgttctccaaaagtgataagtattgtga 10180881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 955 - 1010
Target Start/End: Complemental strand, 11219524 - 11219469
Alignment:
Q  955 atgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttt 1010  Q
    |||||||||||||||||||| ||||||  |||| |||||||| |||||| ||||||    
T  11219524 atgtattcggatcatttttttactcaatcacatggtttggttcggtttgcggtttt 11219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 27035192 - 27035265
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatg-acaagtattgtgaaacgga 81  Q
    ||||||||||| ||||||||||||||   ||||||||||| |||||| || |||| ||||||||| |||||||||    
T  27035192 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctccaa-aatgaacaagtattatgaaacgga 27035265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 26628896 - 26628823
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| |||| |||||| |||| ||||||||||| |||||| || |   ||| |||||||||||||||    
T  26628896 gcattgaaacttgaaaatgacaaataaagtgaaacaaaattattctccaaaagcaacatgtattgtgaaacgga 26628823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 7e-21; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 19692919 - 19692999
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||||| |  |||||||||||||| ||||||||||||    
T  19692919 gcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctctaaaatagacaagtattgtgatacggatggagta 19692999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 19703504 - 19703584
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||||| |  |||||||||||||| ||||||||||||    
T  19703504 gcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctctaaaatagacaagtattgtgatacggatggagta 19703584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 32543676 - 32543757
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||| ||||| |||||| ||||||||||||||||||||| ||||||||| |  ||||||||||||||||| || |||||||    
T  32543676 gcattaaaacttgaaagtaacaagtaaaatgaaacaaaattattctctaaaagcgacaagtattgtgaaacagaaggagtat 32543757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 6129029 - 6128956
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||  || |  |||| |||||||||||||||    
T  6129029 gcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattcttcaaaagcgacatgtattgtgaaacgga 6128956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 21310618 - 21310699
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  21310618 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 21310699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 22321348 - 22321267
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  22321348 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatagacaagtattatgaaacggagggagtat 22321267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 12071757 - 12071837
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  12071757 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 12071837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 24706327 - 24706244
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtatca 91  Q
    ||||||||||| ||||| ||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||||    
T  24706327 gcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatca 24706244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 14261241 - 14261322
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||| ||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  14261241 gcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 14261322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 25704852 - 25704929
Alignment:
Q  12 tgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  25704852 tgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 25704929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 40122567 - 40122494
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| |||||||||    
T  40122567 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacgga 40122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 50839111 - 50839031
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||| ||||||||||  ||||||||||| |||||| || |  |||||||||||||||| ||| ||||||    
T  50839111 gcattgaaacttgaaaatgacaagtaatgtgaaacaaaattattctccaaaagcgacaagtattgtgaaatggagggagta 50839031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 18507346 - 18507276
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaac 78  Q
    ||||||||||| |||||||||||| ||  ||||||||||| || |||||| |  |||||||||||||||||    
T  18507346 gcattgaaacttgaaagtgacaagaaatgtgaaacaaaattatgctctaaaagcgacaagtattgtgaaac 18507276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 44569034 - 44569115
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||  ||||| ||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  44569034 gcattgaaacatgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 44569115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 21661615 - 21661537
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggag 86  Q
    ||||||||||| |||||||| || ||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||    
T  21661615 gcattgaaacttgaaagtgataaatattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggag 21661537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 21670379 - 21670301
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggag 86  Q
    ||||||||||| |||||||| || ||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||    
T  21670379 gcattgaaacttgaaagtgataaatattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggag 21670301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 942 - 996
Target Start/End: Original strand, 23449496 - 23449550
Alignment:
Q  942 gcatttaatttgtatgtattcggatcattttttgactcaacaacattgtttggtt 996  Q
    |||||| ||||| |||||||||||||||||||| |||||||  ||| ||||||||    
T  23449496 gcatttgatttggatgtattcggatcatttttttactcaaccgcatggtttggtt 23449550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 50768059 - 50768129
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaac 78  Q
    ||||||||||| ||||||||||| ||   ||||||||||| ||||||||| |  |||||||||| ||||||    
T  50768059 gcattgaaacttgaaagtgacaaatattgtgaaacaaaattattctctaaaatggacaagtattatgaaac 50768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 7e-18; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 13757404 - 13757487
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtatca 91  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| |||||||||||||||||||    
T  13757404 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggatggagtatca 13757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 8235822 - 8235903
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||||| |||||    
T  8235822 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatagacaagtattatgaaacggatgaagtat 8235903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 15064773 - 15064694
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||| ||||||||||||||  |||||||||||| |||||| || |  |||||||||| ||||||||| |||||||    
T  15064773 attgaaacttgaaagtgacaagtattatgaaacaaaattattctccaaaatggacaagtattatgaaacggagggagtat 15064694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 8626679 - 8626760
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||| ||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  8626679 gcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 8626760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 17942640 - 17942721
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||  || ||||||||| |||||| || |  |||||||||| ||||||||| |||||||    
T  17942640 gcattgaaacttgaaagtgacaagtattataaaacaaaattattctccaaaatggacaagtattatgaaacggagggagtat 17942721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 4129623 - 4129703
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||| ||||| |  |||||||||| ||||||||| ||||||    
T  4129623 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttctaaaatggacaagtattatgaaacggagggagta 4129703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 7761497 - 7761577
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||| ||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  7761497 gcattgaaacttgaaagtgacaaatattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 7761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 29260389 - 29260469
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||| |||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  29260389 gcattgaaacttgaaaatgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 29260469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 1605777 - 1605856
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||| | ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  1605777 attgaaatttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 1605856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 26860963 - 26861042
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||  |||| ||||||||||| ||||||||| | |||||| || ||||||| |||||||||||| ||| ||||||    
T  26860963 attgaaacatgaaaatgacaagtaaagtgaaacaaacttattctccaaaaatgacatgtattgtgaaaccgattgagtat 26861042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 955 - 1013
Target Start/End: Complemental strand, 8065047 - 8064989
Alignment:
Q  955 atgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttttat 1013  Q
    ||||||| |||||| ||||| |||||||||||| | |||||| ||||||||||||||||    
T  8065047 atgtattaggatcacttttttactcaacaacatgggttggttcggtttgtggtttttat 8064989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 20398318 - 20398237
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||| ||||| ||||||| |||||||| ||||||||||| ||| || || | ||||| ||||||||||||| | |||||||    
T  20398318 gcattaaaacttgaaagtggcaagtaaagtgaaacaaaattattttccaaaagtgacatgtattgtgaaacgaagggagtat 20398237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 1e-16; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 24876758 - 24876831
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||||| || || |||||||||||||| |||||    
T  24876758 gcattgacacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaaacgacaagtattgtgagacgga 24876831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 51064834 - 51064753
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||| |||| ||||||||||| ||||||||| |  ||||||||||||||||| || |||||||    
T  51064834 gcattgaaacttgaaagtgacaaataaagtgaaacaaaattattctctaaaatggacaagtattgtgaaacagacggagtat 51064753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 284530 - 284611
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  284530 gcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 284611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 14925659 - 14925732
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| ||||  |||||||||| ||||||||||| || |||||| || ||||||||||||||||||||    
T  14925659 gcattgaaacttgaaaacgacaagtaaagtgaaacaaaattatgctctaaaaacgacaagtattgtgaaacgga 14925732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 40783737 - 40783656
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  40783737 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 40783656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 321823 - 321903
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||  ||||||||| |  |||||||||| ||||||||| ||||||    
T  321823 gcattgaaacttgaaagtgacaagtattgtgaaacaaaaatattctctaaaatggacaagtattatgaaacggagggagta 321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 23045359 - 23045279
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||| ||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  23045359 gcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 23045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 34458804 - 34458724
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    |||| |||||| |||||||||||||||| ||||||||||| |||||| || |  ||||  |||||||||||||| ||||||    
T  34458804 gcatcgaaacttgaaagtgacaagtaaagtgaaacaaaattattctccaaaagcgacatatattgtgaaacggaaggagta 34458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 963 - 1013
Target Start/End: Complemental strand, 18310517 - 18310467
Alignment:
Q  963 ggatcattttttgactcaacaacattgtttggttaggtttgtggtttttat 1013  Q
    |||||||||||||||||||| |||| |||||||| |||| |||||||||||    
T  18310517 ggatcattttttgactcaaccacatggtttggtttggttagtggtttttat 18310467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 25929298 - 25929368
Alignment:
Q  11 ttgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    |||||||| ||||| | ||||| |||||||||||||| ||||| ||| |  ||||||||||||||||||||    
T  25929298 ttgaaacttgaaaggggcaagtgaaatgaaacaaaattattctttaaaagcgacaagtattgtgaaacgga 25929368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 23526436 - 23526517
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| |||||  || |  |||||||||| ||||||||| |||||||    
T  23526436 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattcttcaaaatggacaagtattatgaaacggagggagtat 23526517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 24771986 - 24771905
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||| |||| |||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  24771986 gcattgaaacttgaaagagacatgtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 24771905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 31003867 - 31003787
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||| |||||||  ||||||||||| |||||| || |  || |||||||||||||| || ||||||    
T  31003867 gcattgaaacttgaaagtggcaagtaatgtgaaacaaaattattctccaaaagcgataagtattgtgaaacagagggagta 31003787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 47037932 - 47037852
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   | ||||||||| ||||| ||| |  |||||||||| ||||||||| ||||||    
T  47037932 gcattgaaacttgaaagtgacaagtattgtaaaacaaaattattctttaaaatagacaagtattatgaaacggagggagta 47037852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 23166929 - 23166850
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||| |||||| | || |||  ||||||||||| ||||||||| |  ||| ||||||||||||||||| ||||||    
T  23166929 attgaaacttgaaagtaataaataatgtgaaacaaaattattctctaaaagcgacgagtattgtgaaacggatagagtat 23166850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 942 - 1013
Target Start/End: Complemental strand, 24630513 - 24630442
Alignment:
Q  942 gcatttaatttgtatgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttttat 1013  Q
    |||||||||||| ||||||| |||||| ||||| |||||||  ||| ||||||||  ||||| |||||||||    
T  24630513 gcatttaatttgaatgtatttggatcacttttttactcaaccgcatggtttggttcagtttgcggtttttat 24630442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 688
Target Start/End: Original strand, 33781555 - 33781649
Alignment:
Q  593 gctttgatttcctttgtaattttttgattttcattgacatt-aaaattcgaaaatcattaaatgtatccaaaatatgaaaaattgtaaagaacaaat 688  Q
    ||||||||||||||   ||||  |||||||||||||||||| |||||   ||| ||||| ||||||| |||||||||  ||||| ||||||||||||    
T  33781555 gctttgatttccttctcaattcattgattttcattgacattgaaaataaaaaagtcattcaatgtattcaaaatatg--aaattataaagaacaaat 33781649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 40261365 - 40261320
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattct 53  Q
    ||||||||||| |||||||||||||||  ||||||||||| |||||    
T  40261365 gcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattct 40261320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 40562366 - 40562285
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   | |||||||||||||||  || |  |||||||||| | ||||||||| |||||    
T  40562366 gcattgaaacttgaaagtgacaagtattgtaaaacaaaatcattcttcaaaatggacaagtattataaaacggatgaagtat 40562285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 4e-16; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 26168105 - 26168185
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||| |||| ||||||||||| ||||||||| || |||| |||| |||||||||| ||||||    
T  26168105 gcattgaaacttgaaagtgacaattaaagtgaaacaaaattattctctaaaaacgacatgtatcgtgaaacggaaggagta 26168185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 734417 - 734347
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgg 80  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||| || |  |||||||||||||||||||    
T  734417 attgaaacttgaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaagtattgtgaaacgg 734347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 30720572 - 30720491
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  30720572 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 30720491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 36561179 - 36561099
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  36561179 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 36561099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 40886690 - 40886610
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  40886690 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 40886610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 10285138 - 10285057
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||| ||| |  |||||||||| ||||||||| |||||||    
T  10285138 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatagacaagtattatgaaacggagggagtat 10285057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 12806933 - 12806852
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||| ||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  12806933 gcattgaaacttgaaagagacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 12806852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 25683309 - 25683229
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||||||||||||   |||||||||||| |||||| || |  |||||||||| ||||||||| ||||||    
T  25683309 gcattgaaacttgaaagtgacaagttttatgaaacaaaattattctccaaaatggacaagtattatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 11795363 - 11795300
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtatt 71  Q
    ||||||||||| |||||||| || |||| ||||||||||| |||||||||||| ||||| ||||    
T  11795363 gcattgaaacttgaaagtgataaataaagtgaaacaaaattattctctaagaacgacaaatatt 11795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 11319765 - 11319834
Alignment:
Q  20 gaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    |||||||| || |||| ||||||||||| ||||||||| |  |||||||||| ||||||||||| |||||    
T  11319765 gaaagtgataaataaagtgaaacaaaattattctctaaaatagacaagtattatgaaacggatgaagtat 11319834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 37900703 - 37900622
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| |||||  || |  |||||||||| ||||||||| |||||||    
T  37900703 gcattgaaacttgaaagtgacaagtatcgtgaaacaaaattattcttcaaaatagacaagtattatgaaacggaaggagtat 37900622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 39071079 - 39071152
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||| |||  ||||||||||||||| ||||||||||| |||||| || |  ||||||||||||||| ||||    
T  39071079 gcattgatacttaaaagtgacaagtaaagtgaaacaaaattattctcaaaaatagacaagtattgtgaatcgga 39071152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 25773846 - 25773929
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtatca 91  Q
    ||||||||||| |||||||| |||||   ||||||||| | ||||||||| |  |||||||||| |||||||||  ||||||||    
T  25773846 gcattgaaacttgaaagtgataagtattgtgaaacaaacttattctctaaaatggacaagtattatgaaacggagagagtatca 25773929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 955 - 1010
Target Start/End: Original strand, 28224388 - 28224443
Alignment:
Q  955 atgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttt 1010  Q
    |||||||||||||||||||| |||||||  ||| |||||||| |||||| ||||||    
T  28224388 atgtattcggatcatttttttactcaactgcatagtttggtttggtttgcggtttt 28224443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 30403040 - 30402993
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaa 57  Q
    |||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  30403040 attgaaacttaaaagtgacaagtaaaatgaaataaaattattctctaa 30402993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 1056703 - 1056623
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtatc 90  Q
    ||||||||||| |||||||| | ||||  ||||| ||||| |||||| || | ||||||||||||||||||||| ||||||||    
T  1056703 gcattgaaacttgaaagtgata-gtaat-tgaaataaaattattctccaaaagtgacaagtattgtgaaacggagggagtatc 1056623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 23097804 - 23097723
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||  |||||| |||||||   ||||||||||| |||||| || |  |||||||||| ||||||||| |||||||    
T  23097804 gcattgaaacatgaaagtaacaagtattgtgaaacaaaattattctccaaaatggacaagtattatgaaacggaaggagtat 23097723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 4e-16; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 18355948 - 18355868
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||  || |  |||||||||||||||||||| ||||||    
T  18355948 gcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattcttcaaaatggacaagtattgtgaaacggagggagta 18355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 26783666 - 26783739
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||| ||| |  |||||||||||| |||||||    
T  26783666 gcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctttaaaatagacaagtattgtaaaacgga 26783739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 29375329 - 29375410
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  29375329 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 29375410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 48436421 - 48436502
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| |||||||||||||||  ||||||||||| |||||| || | |||||| ||||||||||  ||||||||||    
T  48436421 gcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattctccaaaagtgacaaatattgtgaaatagatggagtat 48436502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 13365040 - 13365120
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  13365040 gcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 13365120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 46694190 - 46694110
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||    
T  46694190 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 46694110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 36881477 - 36881559
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtatc 90  Q
    ||||||||||| ||||| ||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||||    
T  36881477 gcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatc 36881559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 19241748 - 19241667
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    |||||||||||  |||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  19241748 gcattgaaacttaaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 19241667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 54086751 - 54086818
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaa 77  Q
    ||||||||| ||||||||||| |||||||||||||||  |||||| || |  ||||||||||||||||    
T  54086751 attgaaacttgaaagtgacaaataaaatgaaacaaaagtattctccaaaatggacaagtattgtgaaa 54086818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 633
Target Start/End: Original strand, 24979316 - 24979405
Alignment:
Q  541 ttctcaattcgacagagaagcgaagaccacattgtcacatagggaacaaggagctttgatttcctttgtaattttttgattttcattgacatt 633  Q
    |||||||||||  |||||||| |  | |||||||||||||| ||||  ||||| |||||||||||   ||||||||||| |||||||||||||    
T  24979316 ttctcaattcgtgagagaagcaacaatcacattgtcacataaggaatcaggagttttgatttcct---taattttttgactttcattgacatt 24979405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 6901758 - 6901830
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    |||||||||||  ||||||||||||||| ||||||||||| |||||| || |  ||||| ||||||||||||||    
T  6901758 gcattgaaacttaaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaa-tattgtgaaacgga 6901830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 23088011 - 23087938
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||| ||| |  |||||||||| |||||||||    
T  23088011 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatcgacaagtattatgaaacgga 23087938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 942 - 1010
Target Start/End: Original strand, 2565812 - 2565880
Alignment:
Q  942 gcatttaatttgtatgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttt 1010  Q
    |||||||||||| |||||||||||| ||||||| |||||||   || |||||||| |||||| ||||||    
T  2565812 gcatttaatttggatgtattcggattatttttttactcaactggatggtttggttcggtttgcggtttt 2565880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 3383273 - 3383353
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| | ||||| | ||||||    
T  3383273 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattataaaacgaaaggagta 3383353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 32835069 - 32834989
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||| |||||||||  ||||||| |||| ||||||||  |  |||||||||| ||||||||| ||||||    
T  32835069 gcattgaaacttgaaaatgacaagtactatgaaacgaaattattctctacaatggacaagtattatgaaacggagggagta 32834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 37293605 - 37293644
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaat 47  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  37293605 gcattgaaacttgaaagggacaagtaaaatgaaacaaaat 37293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 13703409 - 13703490
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatg-acaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   | ||||||| | ||||| | |||||| ||||||||| |||||||||||||||||    
T  13703409 gcattgaaacttgaaagtgacaagtattgtaaaacaaatttattct-tcagaatggacaagtattatgaaacggatggagtat 13703490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 24064418 - 24064488
Alignment:
Q  9 cattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacg 79  Q
    |||| ||||| |||||||||| ||||| ||||| ||||| |||||| || || |||| |||||||||||||    
T  24064418 cattaaaacttgaaagtgacatgtaaagtgaaataaaattattctccaaaaacgacatgtattgtgaaacg 24064488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 48820537 - 48820610
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||| | ||| |  |||||||||| |||||||||    
T  48820537 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttttaaaatggacaagtattatgaaacgga 48820610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 27814008 - 27814089
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  27814008 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 27814089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 589 - 678
Target Start/End: Complemental strand, 35666639 - 35666549
Alignment:
Q  589 aggagctttgatttcctttgtaattttttgattttcattgacattaaaattc-gaaaatcattaaatgtatccaaaatatgaaaaattgta 678  Q
    |||||||||||||| ||||  ||||| |||||||||||| | ||| |||||  |||||| ||| |||||||| ||||||||||||||||||    
T  35666639 aggagctttgattttcttttcaatttgttgattttcattaatattgaaattgagaaaattattcaatgtatctaaaatatgaaaaattgta 35666549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 36453204 - 36453131
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacgga 81  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  |||||||||| |||||||||    
T  36453204 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacgga 36453131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 16662290 - 16662370
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||||||||||||||  | ||||||||| |||||  || | ||||||||||||||||| ||| ||||||    
T  16662290 gcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaaagtgacaagtattgtgaaatggagggagta 16662370  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 17636650 - 17636730
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| |||||||||||||||  | ||||||||| |||||  || | ||||||||||||||||| ||| ||||||    
T  17636650 gcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaaagtgacaagtattgtgaaatggagggagta 17636730  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 25614433 - 25614351
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtatc 90  Q
    |||||||||||  |||||||||||||   ||||||||||| ||||||||| |  ||||| |||| ||||||||| ||||||||    
T  25614433 gcattgaaacttaaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaattattatgaaacggagggagtatc 25614351  T

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Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 47110647 - 47110728
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatg-acaagtattgtgaaacggatggagtat 89  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |||| | ||||||| ||||||||| |||||||    
T  47110647 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaa-aatgaataagtattatgaaacggagggagtat 47110728  T

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Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 16360576 - 16360656
Alignment:
Q  10 attgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtatca 91  Q
    ||||||||| |||||||||||||||| |||| | |||| |||||| || || ||||| ||||||||||| || |||||||||    
T  16360576 attgaaacttgaaagtgacaagtaaagtgaagc-aaattattctccaaaaacgacaaatattgtgaaacagaaggagtatca 16360656  T

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Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 10981705 - 10981785
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||||||||| |  ||||| |||| ||||| ||| ||||||    
T  10981705 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaaatattatgaaatggagggagta 10981785  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 943 - 1010
Target Start/End: Complemental strand, 40849429 - 40849362
Alignment:
Q  943 catttaatttgtatgtattcggatcattttttgactcaacaacattgtttggttaggtttgtggtttt 1010  Q
    ||||| ||||| |||||||||||||| ||||| |||||||  ||| |||||||| |||||| ||||||    
T  40849429 catttgatttggatgtattcggatcacttttttactcaaccgcatggtttggtttggtttgcggtttt 40849362  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 40349159 - 40349239
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    |||||||||||  |||||||||||||   |||||| |||| ||||||||| |  |||||||||| ||||||||| |||||||    
T  40349159 gcattgaaacttaaaagtgacaagtattgtgaaac-aaattattctctaaaatggacaagtattatgaaacggagggagtat 40349239  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 7865 - 7946
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagtat 89  Q
    ||||| ||||| |||||||||||||||  ||||  ||||| ||||| ||| || ||||||||||||||||| ||||||||||    
T  7865 gcattaaaacttgaaagtgacaagtaatgtgaattaaaattattctttaaaaacgacaagtattgtgaaacagatggagtat 7946  T

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Target: scaffold1770 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 358 - 438
Alignment:
Q  8 gcattgaaactcgaaagtgacaagtaaaatgaaacaaaatcattctctaagaatgacaagtattgtgaaacggatggagta 88  Q
    ||||||||||| ||||||||||||||   ||||||||||| ||| ||||| |  |||||||||| ||||||||| ||||||    
T  358 gcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttctaaaatggacaagtattatgaaacggagggagta 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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