View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4362-Insertion-10 (Length: 812)
Name: NF4362-Insertion-10
Description: NF4362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4362-Insertion-10 |
 | |
|
| [»] chr7 (7 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 771; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 771; E-Value: 0
Query Start/End: Original strand, 6 - 812
Target Start/End: Complemental strand, 21099089 - 21098283
Alignment:
| Q |
6 |
caacaatttcctctaaccaagatatgttactgcctcttttttctctcacccatgtaaccaacctcccatcactttcctcttctccattaacaatcttgaa |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21099089 |
caacaatttcctctaaccaagatatgttaccgcctcttttttctctcacccatgtaaccaacctcccatcactttcctcttctccattaacaatcttgaa |
21098990 |
T |
|
| Q |
106 |
acctgtagttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattct |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21098989 |
acctgtagttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattct |
21098890 |
T |
|
| Q |
206 |
ggtgccatataccctcttgttcctctaatcatagatacacttgaattgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgg |
305 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21098889 |
ggggccatataccctcttgttcctctaatcatagatacacttgaattgttgagattgtttctgttttgcagcttagacaatccaaaatccgctaacttgg |
21098790 |
T |
|
| Q |
306 |
gttcgaagttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctat |
405 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21098789 |
gttcgaagttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttcctat |
21098690 |
T |
|
| Q |
406 |
tgataaagcaattttgtaccttttactccaatcaagtttattagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtcta |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21098689 |
tgataaagcaattttgtaccttttactccaatcaagtttattagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtcta |
21098590 |
T |
|
| Q |
506 |
tattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcaccttcaccttgtt |
605 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21098589 |
tattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcaccttcaccttgtt |
21098490 |
T |
|
| Q |
606 |
gtgcattgtaaagtctctttattgcagcatgtcttccatcggataatatgcctttgtatacaacacctcctccacctcttccgatctcttggctgaaccc |
705 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
21098489 |
gtgcattgtaaagtctctttattgcagcatgtcttccatcagataatatgcctttgtatacaacacctcctccacctcttccaatctcttggctgaaccc |
21098390 |
T |
|
| Q |
706 |
tttagttgctttctttagctctaagtaactgtattttctaaaccctaattctgctagatggtagccgtgttggtctgcataagtcttttggcgtgaccta |
805 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21098389 |
ttttgttgctttctttagctctaagtaactgtattttctaaaccctaattccgctagatggtagccgtgttggtctgcataagtcttttggcgtgaccta |
21098290 |
T |
|
| Q |
806 |
aacaagg |
812 |
Q |
| |
|
||||||| |
|
|
| T |
21098289 |
aacaagg |
21098283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 573; E-Value: 0
Query Start/End: Original strand, 6 - 785
Target Start/End: Complemental strand, 21108708 - 21107926
Alignment:
| Q |
6 |
caacaatttcctctaaccaagatatgttactgcctcttttttctctcacccatgtaaccaacctcccatcactttcctcttctccattaacaatcttgaa |
105 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21108708 |
caacaatttcctctaaccaagaaatgtcactgcctcttttttctctcacccatgtaaccaacctcccatcactttcctcttctccactaacaatcttgaa |
21108609 |
T |
|
| Q |
106 |
acctgtagttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattct |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
21108608 |
acctgtagttggactttttcctgttatcatttccaaaacaactattccataactataaacatccaccttagatgttattggcaaattgaaaatccattca |
21108509 |
T |
|
| Q |
206 |
ggtgccatataccctcttgttcctctaatcatagatacacttgaattgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgg |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || | | |||||| || |||||||| |||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
21108508 |
ggtgccatataccctcttgttcctctaatcattgagatgcatgaattattaaggttgttcctgttttgcagctttgacaatccaaaatcggctaacttgg |
21108409 |
T |
|
| Q |
306 |
gttcgaagttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctat |
405 |
Q |
| |
|
| | ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21108408 |
gctggaagttagaatcaagaagtatgttttgtggctttatatcacaatgcaaaatccactccaaacattcttcatgtagatatgctaaaactcttgctat |
21108309 |
T |
|
| Q |
406 |
tgataaagcaattttgtaccttttactccaatcaagtttattagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtcta |
505 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21108308 |
tgataaaacaattttgtaccttttactccaatcaagtttattagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtcta |
21108209 |
T |
|
| Q |
506 |
tattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcaccttcaccttgtt |
605 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
21108208 |
tattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcaccttctccttgtt |
21108109 |
T |
|
| Q |
606 |
gtgcattgtaaagtctctttattgcagcatgtcttccatcggataatatgcctttgtatacaacacctcctccacctcttccgatctcttggctgaaccc |
705 |
Q |
| |
|
| |||||||||||||| |||| ||| |||||||| ||| ||||||| ||||||||| || | ||| |||||||||||||| |||||||| |||||||| |
|
|
| T |
21108108 |
gagcattgtaaagtctttttaccgcaacatgtctttgatcagataataggcctttgtacacgataccccctccacctcttccaatctcttgactgaaccc |
21108009 |
T |
|
| Q |
706 |
tttagttgctttctttagctctaagtaactgtattttctaaaccctaattctgcta---gatggtagccgtgttggtctgcat |
785 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||||||||||| | |||| | | ||||| |||||||||||||||| |
|
|
| T |
21108008 |
ttttgttgctttctttagctccaagtaactgtattttctaaaccctattgctgcgagctggtggtatccgtgttggtctgcat |
21107926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 113 - 693
Target Start/End: Original strand, 21130221 - 21130810
Alignment:
| Q |
113 |
gttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgcca |
212 |
Q |
| |
|
|||||||| ||||| |||||||| || || || || | || || ||||||||||| ||||||||||||||||| |||||||||||||| || ||||||| |
|
|
| T |
21130221 |
gttggactctttccggttatcatctctaacacgacaaccccgtaactataaacatccactttagatgttattggtaaattgaaaatccactcaggtgcca |
21130320 |
T |
|
| Q |
213 |
tataccctcttgttcctctaatcatagatacacttgaattgtt---gaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttc |
309 |
Q |
| |
|
|||| |||| ||||||||||||||| || | | |||| | || ||| ||||||| ||||| ||||||||||||||||||| ||||||||||| | |
|
|
| T |
21130321 |
tatatcctcgtgttcctctaatcattgagaatcctgaactattatcgagattgtttcgattttgtagcttagacaatccaaaatcggctaacttgggctg |
21130420 |
T |
|
| Q |
310 |
gaagttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctattgat |
409 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| || | |
|
|
| T |
21130421 |
aaagttagaatcaagaagtatattttgaggctttatatcacaatgcaaaatccattccaaacattcttcatgtagatatgctaaaactctagctgttcct |
21130520 |
T |
|
| Q |
410 |
aaagcaattttgtaccttttactccaatcaagtttattag---ccgat--aag-ttttcggctaaagaaccattttccatgtactcgtaaaccaatagtc |
503 |
Q |
| |
|
|||||||| | ||||||||| ||||||||||| | || | ||| ||| ||||| |||||||||||||||||||||||||| || ||||| | || |
|
|
| T |
21130521 |
aaagcaatatcataccttttagtccaatcaagtgtgttggttttggatgaaagattttccgctaaagaaccattttccatgtactcatataccaaaattc |
21130620 |
T |
|
| Q |
504 |
tatattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcaccttcaccttg |
603 |
Q |
| |
|
||| || || ||| | ||||||||||||||||| |||||||||||||| |||||| || ||||||| | ||||||||| ||||| || ||||| ||||| |
|
|
| T |
21130621 |
tatgcttaccttcaacacaatatccccacatttcaatcaaattcatgtggttaagcttttcaatgatgcttacttcagcaagaaactctccttctccttg |
21130720 |
T |
|
| Q |
604 |
ttgtgcattgtaaagtctctttattgcagcatgtcttccatcggataatatgcctttgtatacaacacctcctccacctcttccgatctc |
693 |
Q |
| |
|
|| || | | | |||||||||||| |||| |||| ||| | ||| | ||| | |||||||| ||||||||||||||||| ||||| |
|
|
| T |
21130721 |
tttagcttcattcaatctctttattgctgcatctctttgatccggcaatgtacctctatatacaactcctcctccacctcttccaatctc |
21130810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 113 - 693
Target Start/End: Original strand, 21111261 - 21111850
Alignment:
| Q |
113 |
gttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgcca |
212 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| | ||| | ||||| ||||||||||| ||||||||||||||||| ||||| |||||||||| || |||| |
|
|
| T |
21111261 |
gttggactctttccggttatcatatccaacaaaacaaccccataactataaacatccactttagatgttattggtgaattggaaatccattcaggggcca |
21111360 |
T |
|
| Q |
213 |
tataccctcttgttcctctaatcatagatacacttgaattgttg---aggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttc |
309 |
Q |
| |
|
|||| |||||||||||||||||||| || | |||||| || || ||||||||| ||| |||||||||||||||||||| ||||||||||| | |
|
|
| T |
21111361 |
tatatcctcttgttcctctaatcattgagaattctgaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctg |
21111460 |
T |
|
| Q |
310 |
gaagttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctattgat |
409 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| || |||||||| | |||||||||||||||||| || | |||||| ||| || | |
|
|
| T |
21111461 |
aaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcct |
21111560 |
T |
|
| Q |
410 |
aaagcaattttgtaccttttactccaatcaagt---tta---ttagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtc |
503 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| ||| |||| || | ||||| |||||||| ||||||||||||||||| || ||||| |||| |
|
|
| T |
21111561 |
aaagcaatatcataccttttactccaatcaagtgtgttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaagtc |
21111660 |
T |
|
| Q |
504 |
tatattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcaccttcaccttg |
603 |
Q |
| |
|
||| || || ||||| ||||||||||||||||| ||||| |||||||| ||||||| ||||||||| | |||||| || |||||||| ||||| ||||| |
|
|
| T |
21111661 |
tatgcttaccttcagcacaatatccccacatttctatcaagttcatgtggttaagccgtccaatgatacttacttcggcaagaaattctccttctccttg |
21111760 |
T |
|
| Q |
604 |
ttgtgcattgtaaagtctctttattgcagcatgtcttccatcggataatatgcctttgtatacaacacctcctccacctcttccgatctc |
693 |
Q |
| |
|
|| || | | | |||||||||||| |||||||| |||| | ||| | ||| | ||||||| ||||||||||||||||| ||||| |
|
|
| T |
21111761 |
tttagcttcatttaatctctttattgctacatgtctttcatctggcaatgtacctctatatacaatccctcctccacctcttccaatctc |
21111850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 113 - 693
Target Start/End: Original strand, 18658383 - 18658972
Alignment:
| Q |
113 |
gttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgcca |
212 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| | || | ||||| | ||||||||| |||||||||||||||||||||||||||||||| || || |||| |
|
|
| T |
18658383 |
gttggactctttccagttatcatctccaacaatacaaccccataaccataaacatccactttagatgttattggcaaattgaaaatccactcaggggcca |
18658482 |
T |
|
| Q |
213 |
tataccctcttgttcctctaatcatagatacacttgaattgttg---aggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttc |
309 |
Q |
| |
|
|||| |||||||||||||||||||| || | |||||| || || |||||| | ||| ||||||||| |||||||||| |||||||| || | |
|
|
| T |
18658483 |
tatatcctcttgttcctctaatcattgagaattctgaattattattaagactgtttcgggttttcagcttagataatccaaaatctgctaacttagggtg |
18658582 |
T |
|
| Q |
310 |
gaagttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctattgat |
409 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| | ||| || | |
|
|
| T |
18658583 |
aaagttagaatcaagaagtatgttttgaggctttatatcacaatgcaaaatccattccaaacattcttcatgtagataagctagaactttagctgttcct |
18658682 |
T |
|
| Q |
410 |
aaagcaattttgtaccttttactccaatcaagt---tta---ttagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtc |
503 |
Q |
| |
|
|||||||| | |||||||||||||| |||||| ||| |||| || | ||||| |||||||| ||||||||||||||||| || ||||| |||| |
|
|
| T |
18658683 |
aaagcaatatcataccttttactccagtcaagtgtgttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaagtc |
18658782 |
T |
|
| Q |
504 |
tatattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcaccttcaccttg |
603 |
Q |
| |
|
||| || || ||||| |||||||||||||| || ||||| |||||||| ||||||| ||||||||| | ||||||||| |||||||| ||||| ||||| |
|
|
| T |
18658783 |
tatgcttaccttcagcacaatatccccacatatcaatcaagttcatgtggttaagccgtccaatgatgcttacttcagcaagaaattctccttctccttg |
18658882 |
T |
|
| Q |
604 |
ttgtgcattgtaaagtctctttattgcagcatgtcttccatcggataatatgcctttgtatacaacacctcctccacctcttccgatctc |
693 |
Q |
| |
|
|| || | | | |||||||||||| ||||||||| ||| | ||| | ||| | ||||||| ||||||||||||||||| ||||| |
|
|
| T |
18658883 |
tttagcttcatttaatctctttattgctgcatgtctttgatctggcaatgtacctctatatacaatccctcctccacctcttccaatctc |
18658972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 152 - 442
Target Start/End: Original strand, 21123132 - 21123425
Alignment:
| Q |
152 |
ccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgccatataccctcttgttcctctaatcatagatacacttgaat |
251 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||| |||||| |||||||||| || |||||||| |||||||||||||||||||| || | ||||| |
|
|
| T |
21123132 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
21123231 |
T |
|
| Q |
252 |
tgttg---aggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatc |
348 |
Q |
| |
|
| || || ||||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21123232 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggttgaaagttagaatcaagaagtatattttgaggctttatatc |
21123331 |
T |
|
| Q |
349 |
acaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctattgataaagcaattttgtaccttttactccaatcaagt |
442 |
Q |
| |
|
|||||| |||||||| |||| |||||||||||||||||| || | |||||| ||| || ||||||||| | ||||||||||||||||||||| |
|
|
| T |
21123332 |
acaatgcaaaatccactccatacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagt |
21123425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 464 - 567
Target Start/End: Original strand, 29213149 - 29213252
Alignment:
| Q |
464 |
gctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttc |
563 |
Q |
| |
|
|||||||||||||| | |||| |||| || || || | ||||| | ||||||| || ||||| ||||||| ||| |||||||||||||| |||||| ||| |
|
|
| T |
29213149 |
gctaaagaaccattatacatgaactcatagacaaacattctatgtattccctctgcacaataaccccacaattcaatcaaattcatgtggttaagctttc |
29213248 |
T |
|
| Q |
564 |
caat |
567 |
Q |
| |
|
|||| |
|
|
| T |
29213249 |
caat |
29213252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 152; Significance: 5e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 119 - 603
Target Start/End: Complemental strand, 39132509 - 39132016
Alignment:
| Q |
119 |
ctttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgccatatacc |
218 |
Q |
| |
|
|||||||| |||||||| ||||| | ||| || ||||| ||||||||||| ||||||||||||||||| |||||||||| |||||| || |||||||| | |
|
|
| T |
39132509 |
ctttttccagttatcatctccaacaaaacaatcccataactataaacatccactttagatgttattggtaaattgaaaacccattcaggagccatatatc |
39132410 |
T |
|
| Q |
219 |
ctcttgttcctctaatcatagatacacttgaattg---ttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttcgaagtt |
315 |
Q |
| |
|
||||||||||||||||||| || | |||||| |||| |||||||| ||| |||||||||||||||||| | ||||||||||||| |||| |
|
|
| T |
39132409 |
ctcttgttcctctaatcattgagaattctgaattactattgacattgtttctatttctcagcttagacaatccaaagtctgctaacttgggttgatagtt |
39132310 |
T |
|
| Q |
316 |
agaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctattgataaagca |
415 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| ||| || ||||||| |
|
|
| T |
39132309 |
agaatcaagaagtatattttgaggctttatatcacaatgtaaaatccactccaaacattcttcatgtagataagctaggactctagctgttcctaaagca |
39132210 |
T |
|
| Q |
416 |
attttgtaccttttactccaatcaa----gtt--tattagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtctatatt |
509 |
Q |
| |
|
|| | ||||||||||||||||||| ||| | |||| || | ||||| |||||||| |||| | ||||||||| || ||||| | ||||| | |
|
|
| T |
39132209 |
atatcataccttttactccaatcaagcatgttagttttagatgaaagattttcagctaaagagtcattcttcatgtactcatataccaaaattctatgct |
39132110 |
T |
|
| Q |
510 |
ttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcaccttcaccttg |
603 |
Q |
| |
|
| || ||| | ||||||||||||||||| || || ||||||||||| |||||||| ||||| | ||||||||| ||||| || ||||| ||||| |
|
|
| T |
39132109 |
taccttcaacacaatatccccacatttcaattaagttcatgtgattgagccttccgatgatgcttacttcagcaagaaactctccttccccttg |
39132016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 112; Significance: 3e-56; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 151 - 593
Target Start/End: Complemental strand, 26690782 - 26690340
Alignment:
| Q |
151 |
tccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgccatataccctcttgttcctctaatcatagatacacttgaa |
250 |
Q |
| |
|
||||||||||||||||||||| || || || |||||||| |||||||||||||| |||||||| || |||||||||||||| ||| | || | ||||||| |
|
|
| T |
26690782 |
tccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
26690683 |
T |
|
| Q |
251 |
ttgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatcac |
350 |
Q |
| |
|
|| | || ||||| || | | | | ||||||||| ||||||| ||||| |||||||| | | || || |||| ||||| |||||||||||||| |||| |
|
|
| T |
26690682 |
ttatcaagattgttcctttgtagtaacttagacaacccaaaatccgctaccttgggttggtaattggagtcaattagtatgttttgcggctttatgtcac |
26690583 |
T |
|
| Q |
351 |
aatgtaaaatccattccaaacattcttcatgtagatatgcta-aaactcttgctattgataaagcaattttgtaccttttactccaatcaagtttattag |
449 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| |||||| | | ||| |||| || | ||||||||| ||||| |||| ||||| |||| ||| | |
|
|
| T |
26690582 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagacact-ttgcagttccgagagcaattttatacctcttaccccaattaagtgcatttg |
26690484 |
T |
|
| Q |
450 |
ccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatcaaattcat |
549 |
Q |
| |
|
|| || || || ||||||||||| |||||||||||||| |||| || | ||| | ||||||||| || ||||| |||||||| | ||||||||||| |
|
|
| T |
26690483 |
atgacaaattatccgctaaagaacctttttccatgtactcaaaaactaacaatctgtgttttccctctgcacaatacccccacataccaatcaaattcat |
26690384 |
T |
|
| Q |
550 |
gtgattaagccttccaatgattcctacttcagctagaaattcac |
593 |
Q |
| |
|
||| |||||||||||||||| | |||||||| |||||||||| |
|
|
| T |
26690383 |
gtggttaagccttccaatgacgctaacttcagcaagaaattcac |
26690340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 151 - 593
Target Start/End: Complemental strand, 26732093 - 26731651
Alignment:
| Q |
151 |
tccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgccatataccctcttgttcctctaatcatagatacacttgaa |
250 |
Q |
| |
|
||||||||||||||||||||| || || || |||||||| |||||||||||||| |||||||| || |||||||||||||| ||| | || | ||||||| |
|
|
| T |
26732093 |
tccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
26731994 |
T |
|
| Q |
251 |
ttgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatcac |
350 |
Q |
| |
|
|| | || ||||| || | | | | ||||||||| ||||||| ||||| |||||||| | | | ||| |||| ||||| |||||||||||||| |||| |
|
|
| T |
26731993 |
ttatcaagattgttcctttgtagtaacttagacaacccaaaatccgctaccttgggttggtaatcagagtcaattagtatgttttgcggctttatgtcac |
26731894 |
T |
|
| Q |
351 |
aatgtaaaatccattccaaacattcttcatgtagatatgcta-aaactcttgctattgataaagcaattttgtaccttttactccaatcaagtttattag |
449 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| |||||| | | ||| |||| || | ||||||||| ||||| |||| ||||| |||| ||| | |
|
|
| T |
26731893 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagacact-ttgcagttccgagagcaattttatacctcttaccccaattaagtgcatttg |
26731795 |
T |
|
| Q |
450 |
ccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatcaaattcat |
549 |
Q |
| |
|
|| || || || ||||||||||| |||||||||||||| |||| || | ||| | ||||||||| || ||||| |||||||| | ||||||||||| |
|
|
| T |
26731794 |
atgacaaattatccgctaaagaacctttttccatgtactcaaaaactaacaatctgtgttttccctctgcacaatacccccacataccaatcaaattcat |
26731695 |
T |
|
| Q |
550 |
gtgattaagccttccaatgattcctacttcagctagaaattcac |
593 |
Q |
| |
|
||| |||||||||||||||| | |||||||| |||||||||| |
|
|
| T |
26731694 |
gtggttaagccttccaatgacgctaacttcagcaagaaattcac |
26731651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 106 - 593
Target Start/End: Original strand, 26743865 - 26744352
Alignment:
| Q |
106 |
acctgtagttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattct |
205 |
Q |
| |
|
|||||| |||||||| ||||| || ||||| ||||| ||||| | |||||||||||||||||| ||||| || || ||| || ||||||| ||| || |
|
|
| T |
26743865 |
acctgttgttggactctttccggtaatcatctccaacacaacgactccatagctataaacatccacttttgaagtgatttccatgttgaaaacccactca |
26743964 |
T |
|
| Q |
206 |
ggtgccatataccctcttgttcctctaatcatagatacacttgaattgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgg |
305 |
Q |
| |
|
|||||||| || |||||||| |||| |||| | || | |||||| | | || || || ||| ||||| ||||| ||||||| ||||| ||| | |
|
|
| T |
26743965 |
ggtgccatgtaacctcttgtccctcgaatcctcgagaattttgaatgatcaaagtcgtccctatttaatagcttggacaaaccaaaatccgctaccttcg |
26744064 |
T |
|
| Q |
306 |
gttcgaagttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctat |
405 |
Q |
| |
|
||| | | | ||| |||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||| ||| || | | |||| | |
|
|
| T |
26744065 |
gttggtaatcagagtcaacaagtatgttttgcggctttatatcacaatgcaaaatccactccaaacattcttcgtgtaaataagcaaggccctttgcagt |
26744164 |
T |
|
| Q |
406 |
tgataaagcaattttgtaccttttactccaatcaagtttattagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtcta |
505 |
Q |
| |
|
| | |||||| || |||||||||||||||||||||||||| | || | || |||||||||| ||| ||||||||| ||||||||||||| | |||| |
|
|
| T |
26744165 |
tcccatagcaatgttataccttttactccaatcaagtttatttgatgaaagattatcggctaaagtaccgttttccatgcactcgtaaaccaacaatcta |
26744264 |
T |
|
| Q |
506 |
tattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgattcctacttcagctagaaattcac |
593 |
Q |
| |
|
| |||||||||||| ||||| |||||||| | || || |||||||| ||||||||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
26744265 |
tgttttccctcagcacaatagccccacataccaattaagttcatgtggttaagccttccaatgatgcttacttcagcaagaaactcac |
26744352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 151 - 569
Target Start/End: Complemental strand, 26694943 - 26694525
Alignment:
| Q |
151 |
tccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgccatataccctcttgttcctctaatcatagatacacttgaa |
250 |
Q |
| |
|
||||||||||||||||||||| || || || |||||||| |||||||||||||| ||| |||| || |||||||||||||| ||| | || | ||||||| |
|
|
| T |
26694943 |
tccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtcccatgtaacctcttgttcctctcatccttgagaaacttgaa |
26694844 |
T |
|
| Q |
251 |
ttgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatcac |
350 |
Q |
| |
|
|| | | ||||| || | | | ||||||||| ||||||| ||||| |||||||| | | || || |||| ||||| |||||||||||||| |||| |
|
|
| T |
26694843 |
ttatcaaaattgttcctttgtactaacttagacaacccaaaatccgctaccttgggttggtaattggagtcaattagtatgttttgcggctttatgtcac |
26694744 |
T |
|
| Q |
351 |
aatgtaaaatccattccaaacattcttcatgtagatatgcta-aaactcttgctattgataaagcaattttgtaccttttactccaatcaagtttattag |
449 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| ||| || | | ||| |||| || | ||||||||||||||| |||| ||||| ||| ||| | |
|
|
| T |
26694743 |
aatgcaaaatccactccaaacattcttcatgtaaataggcaagacact-ttgcagttccgagagcaattttgtacctcttaccccaattaagcgcatttg |
26694645 |
T |
|
| Q |
450 |
ccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatcaaattcat |
549 |
Q |
| |
|
|| || || || | ||||||||| |||||||||||||| |||| || | ||| | ||||||||| || ||||| |||||||| | ||||||||||| |
|
|
| T |
26694644 |
atgacaaattatcagttaaagaacctttttccatgtactcaaaaactaacaatctgtgttttccctctgcacaatacccccacataccaatcaaattcat |
26694545 |
T |
|
| Q |
550 |
gtgattaagccttccaatga |
569 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
26694544 |
gtggttaagccttccaatga |
26694525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 113 - 390
Target Start/End: Original strand, 26675261 - 26675538
Alignment:
| Q |
113 |
gttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgcca |
212 |
Q |
| |
|
|||||||| ||||| || ||||| ||||| || || |||||||| |||||||||||||| || || || |||||||| |||||||||||||| ||||||| |
|
|
| T |
26675261 |
gttggactctttccggtaatcatctccaacaccacaattccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgcca |
26675360 |
T |
|
| Q |
213 |
tataccctcttgttcctctaatcatagatacacttgaattgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttcgaa |
312 |
Q |
| |
|
| || |||||||||||||| ||| | || | ||||||||| || || ||||| || | | ||||||||||| ||||||| ||| |||||| | | |
|
|
| T |
26675361 |
tgtaacctcttgttcctctcatccttgagaaacttgaattattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggta |
26675460 |
T |
|
| Q |
313 |
gttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgc |
390 |
Q |
| |
|
| ||| |||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||||| |
|
|
| T |
26675461 |
atcagagtcaataagtatgttttgaggctttatatcacaatgcaaaatccactccaaacattcttcatgtaaatatgc |
26675538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 151 - 588
Target Start/End: Original strand, 26698511 - 26698948
Alignment:
| Q |
151 |
tccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgccatataccctcttgttcctctaatcatagatacacttgaa |
250 |
Q |
| |
|
|||||||||||||||||| ||||| || || ||| ||| ||||||| |||||| |||||||| || |||||||| |||| |||| | || | | ||||| |
|
|
| T |
26698511 |
tccatagctataaacatccacttttgaagtaatttgcatgttgaaaacccattcaggtgccatgtaacctcttgtccctcgaatcctcgagaaatttgaa |
26698610 |
T |
|
| Q |
251 |
ttgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatcac |
350 |
Q |
| |
|
|| | |||| || || || ||||||||||| ||||||| |||| ||| |||| | | || |||| |||||| ||||| ||||||||||| | |
|
|
| T |
26698611 |
ttatcaaggtcattcctattcaatagcttagacaaaccaaaatctgctaccttaggttgataatccgagtcaacaagtatgttttgtggctttatatcgc |
26698710 |
T |
|
| Q |
351 |
aatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctattgataaagcaattttgtaccttttactccaatcaagtttattagc |
450 |
Q |
| |
|
|||| |||||||| |||||||| ||||| |||| ||| || | | | |||| || | |||||| || |||||||||| ||||||||||| | | | |
|
|
| T |
26698711 |
aatgcaaaatccactccaaacactcttcgtgtaaataagcaagaccctttgcagttcccatagcaatgttataccttttaccccaatcaagttcacttga |
26698810 |
T |
|
| Q |
451 |
cgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatcaaattcatg |
550 |
Q |
| |
|
|| | || || ||||||| |||||||||||||||||| |||||||| | ||| | ||||||||| || ||||| ||||||||| | |||||||||||| |
|
|
| T |
26698811 |
tgagagattatcagctaaagtaccattttccatgtactcataaaccaacaatctgtgttttccctcggcacaataaccccacattcctatcaaattcatg |
26698910 |
T |
|
| Q |
551 |
tgattaagccttccaatgattcctacttcagctagaaa |
588 |
Q |
| |
|
|||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
26698911 |
tgattaagccttccaatgatgctaacttcagcaagaaa |
26698948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 151 - 570
Target Start/End: Original strand, 26733674 - 26734093
Alignment:
| Q |
151 |
tccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgccatataccctcttgttcctctaatcatagatacacttgaa |
250 |
Q |
| |
|
|||||||||||||||||| ||||| || || ||| ||| ||||||| |||||| |||||||| || |||||||| |||| |||| | || | | ||||| |
|
|
| T |
26733674 |
tccatagctataaacatccacttttgaagtaatttgcatgttgaaaacccattcaggtgccatgtaacctcttgtccctcgaatcctcgagaaatttgaa |
26733773 |
T |
|
| Q |
251 |
ttgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatcac |
350 |
Q |
| |
|
|| | |||| || || || ||||||||||| ||||||| |||| ||| |||| | | || |||| |||||| ||||| ||||||||||| | |
|
|
| T |
26733774 |
ttatcaaggtcattcctattcaatagcttagacaaaccaaaatctgctaccttaggttgataatccgagtcaacaagtatgttttgtggctttatatcgc |
26733873 |
T |
|
| Q |
351 |
aatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctattgataaagcaattttgtaccttttactccaatcaagtttattagc |
450 |
Q |
| |
|
|||| |||||||| |||||||| ||||| |||| ||| || | | | |||| || | |||||| || |||||||||| ||||||||||| | | | |
|
|
| T |
26733874 |
aatgcaaaatccactccaaacactcttcgtgtaaataagcaagaccctttgcagttcccatagcaatgttataccttttaccccaatcaagttcacttga |
26733973 |
T |
|
| Q |
451 |
cgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatcaaattcatg |
550 |
Q |
| |
|
|| | || || ||||||| |||||||||||||||||| |||||||| | ||| | ||||||||| || ||||| ||||||||| | |||||||||||| |
|
|
| T |
26733974 |
tgagagattatcagctaaagtaccattttccatgtactcataaaccaacaatctgtgttttccctcggcacaataaccccacattcctatcaaattcatg |
26734073 |
T |
|
| Q |
551 |
tgattaagccttccaatgat |
570 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
26734074 |
tgattaagccttccaatgat |
26734093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 106 - 570
Target Start/End: Original strand, 26750790 - 26751254
Alignment:
| Q |
106 |
acctgtagttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattct |
205 |
Q |
| |
|
|||||| |||||||| ||||| || ||||| ||||| ||||| | ||||||||||||||| || |||||||| || ||| ||| ||||||| |||||| |
|
|
| T |
26750790 |
acctgttgttggactctttccggtaatcatctccaacacaacgactccatagctataaacgtccactttagaagtgatttgcatgttgaaaacccattca |
26750889 |
T |
|
| Q |
206 |
ggtgccatataccctcttgttcctctaatcatagatacacttgaattgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgg |
305 |
Q |
| |
|
|||||||| || |||||||| |||| |||| | || | | ||||||| | |||| | || || ||||| |||| ||||||| |||| ||| | |
|
|
| T |
26750890 |
ggtgccatgtaacctcttgtccctcgaatcctcgagaaatttgaattatcaaggtcatccctattcaatagcttggacagaccaaaatcagctaccttcg |
26750989 |
T |
|
| Q |
306 |
gttcgaagttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgctat |
405 |
Q |
| |
|
||| | | | || |||| |||||| |||||||| |||||||| ||||| |||||||| |||||||||||||| |||| ||| || | | |||| | |
|
|
| T |
26750990 |
gttggtaatcggagtcaacaagtatgttttgcggttttatatcgcaatgcaaaatccactccaaacattcttcgtgtaaatacgcaagtccctttgcagt |
26751089 |
T |
|
| Q |
406 |
tgataaagcaattttgtaccttttactccaatcaagtttattagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtcta |
505 |
Q |
| |
|
| | |||||| || ||||| |||| ||||||||||| ||| | || | || || ||||||| ||| |||||||||||||| |||||||| | |||| |
|
|
| T |
26751090 |
tcccatagcaatgttatacctcttaccccaatcaagttcatttgatgagagattatcagctaaagtacccttttccatgtactcataaaccaacaatcta |
26751189 |
T |
|
| Q |
506 |
tattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgat |
570 |
Q |
| |
|
| ||||||||||| ||||| |||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
26751190 |
tgctttccctcagcacaataaccccacataccaatcaaattcatgtggttaagccttccaatgat |
26751254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 106 - 570
Target Start/End: Original strand, 26736854 - 26737318
Alignment:
| Q |
106 |
acctgtagttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattct |
205 |
Q |
| |
|
|||||| |||||||| |||||||| ||||| ||||| || || | |||||||||||||||||| ||||| || || ||| ||| ||||||| |||||| |
|
|
| T |
26736854 |
acctgttgttggactctttcctgtaatcatctccaacaccacaactccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattca |
26736953 |
T |
|
| Q |
206 |
ggtgccatataccctcttgttcctctaatcatagatacacttgaattgttgaggttgtttctgttttgcagcttagacaatccaaaattcgctaacttgg |
305 |
Q |
| |
|
|||||||| || |||| ||| |||| |||| | || | ||||||| | | | || ||||| ||||||||||| ||||||| || | ||| | |
|
|
| T |
26736954 |
ggtgccatgtaacctcgtgtccctcgaatccttgagaagtttgaattatcatgctcattcctgttcaatagcttagacaaaccaaaatctgcaaccttag |
26737053 |
T |
|
| Q |
306 |
gttcga-agttagaatcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttgcta |
404 |
Q |
| |
|
|| ||| | | ||| |||| |||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||| ||| || | | | |||| |
|
|
| T |
26737054 |
gt-cgataatcagagtcaacaagtatgttttgcggctttatatcgcaatgcaaaatccactccaaacactcttcatgtaaataagcaagacattttgcag |
26737152 |
T |
|
| Q |
405 |
ttgataaagcaattttgtaccttttactccaatcaagtttattagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtct |
504 |
Q |
| |
|
|| || |||||| || || || | ||||||||||| ||| | || | || || ||||||| |||||||||||||||||| |||||||| | | | |
|
|
| T |
26737153 |
ttcctatagcaataccatatctctttccccaatcaagttcatttgatgagagattatcagctaaagtaccattttccatgtactcataaaccaacaattt |
26737252 |
T |
|
| Q |
505 |
atattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttccaatgat |
570 |
Q |
| |
|
|| |||||||||||| ||||| ||||||||| | || ||||||||||| ||||||||||||||||| |
|
|
| T |
26737253 |
atgttttccctcagcacaataaccccacattccaattaaattcatgtggttaagccttccaatgat |
26737318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 464 - 570
Target Start/End: Original strand, 26713976 - 26714082
Alignment:
| Q |
464 |
gctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttc |
563 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||| | | ||| |||||||||||| ||||| ||||||||| | |||||||||||||| |||||||||| |
|
|
| T |
26713976 |
gctaaagtaccattttccatgtactcataaaccaacaatttatgttttccctcagcacaataaccccacattccaatcaaattcatgtggttaagccttc |
26714075 |
T |
|
| Q |
564 |
caatgat |
570 |
Q |
| |
|
||||||| |
|
|
| T |
26714076 |
caatgat |
26714082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 47212036 - 47212153
Alignment:
| Q |
113 |
gttggactttttcctgttatcatttccaatacaactattccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggtgcca |
212 |
Q |
| |
|
|||| |||| |||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| ||| |||||||| || ||||||| |
|
|
| T |
47212036 |
gttgcacttcttccagttatcatttccaacacaaccattccatagctataaacatcaactttagatgttattgaatgattcaaaatccactcaggtgcca |
47212135 |
T |
|
| Q |
213 |
tataccctcttgttcctc |
230 |
Q |
| |
|
| || ||||||||||||| |
|
|
| T |
47212136 |
tgtaacctcttgttcctc |
47212153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 568
Target Start/End: Original strand, 47212387 - 47212491
Alignment:
| Q |
464 |
gctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatcaaattcatgtgattaagccttc |
563 |
Q |
| |
|
|||||||||||||| |||||| |||| || || | | ||||| ||||||||| || ||||| ||||||||||| |||||||||||||| |||||| ||| |
|
|
| T |
47212387 |
gctaaagaaccattatccatgaactcatacacaagcattctatgttttccctctgcacaataaccccacatttcaatcaaattcatgtggttaagctttc |
47212486 |
T |
|
| Q |
564 |
caatg |
568 |
Q |
| |
|
||||| |
|
|
| T |
47212487 |
caatg |
47212491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 383
Target Start/End: Original strand, 26713832 - 26713895
Alignment:
| Q |
320 |
tcaagaagtatattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgta |
383 |
Q |
| |
|
|||| |||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||| |
|
|
| T |
26713832 |
tcaacaagtatgttttgcggctttatatcgcaatgcaaaatccactccaaacactcttcatgta |
26713895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 47193641 - 47193587
Alignment:
| Q |
329 |
atattttgcggctttatatcacaatgtaaaatccattccaaacattcttcatgta |
383 |
Q |
| |
|
|||||||| || || | |||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
47193641 |
atattttgaggtttcacatcacaatgtaaaacccattccaaacactcttcatgta |
47193587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 534
Target Start/End: Complemental strand, 9792605 - 9792536
Alignment:
| Q |
465 |
ctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacat |
534 |
Q |
| |
|
|||| ||||||| |||||| ||||| |||||||| ||||||| ||| || ||| | |||||||||||||| |
|
|
| T |
9792605 |
ctaatgaaccatgttccatatactcataaaccaaaagtctatttttcccttcaacacaatatccccacat |
9792536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 23466614 - 23466651
Alignment:
| Q |
194 |
aaaatccattctggtgccatataccctcttgttcctct |
231 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
23466614 |
aaaagccattctggtgccatataacctcttgttcctct |
23466651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 11791103 - 11791152
Alignment:
| Q |
338 |
ggctttatatcacaatgtaaaatccattccaaacattcttcatgtagata |
387 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||| || ||||||||||| |
|
|
| T |
11791103 |
ggcttaatatcacaatgcaaaacccattccaaacactcctcatgtagata |
11791152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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