View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4362-Insertion-19 (Length: 366)
Name: NF4362-Insertion-19
Description: NF4362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4362-Insertion-19 |
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Alignment Details
Target: chr5 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 6 - 337
Target Start/End: Complemental strand, 36556695 - 36556364
Alignment:
| Q |
6 |
cacatgatgctgcacatgctggatgtaacagcaaacattcagatgcaggtgaagaatgcacagatgaagatgattctcttggattgtattctgatgttga |
105 |
Q |
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| T |
36556695 |
cacatgatgctgcacatgctggatgtaacagcaaacattcagatgcaggtgaagaatgcacagatgaagatgattctcttggattatattctgatgttga |
36556596 |
T |
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| Q |
106 |
tgacacttttagaactgcaaagaaacatattaaagctcatattcatgaaggaatggttggtgatcatgatgattctcctgatgttgcacacaacaatgtt |
205 |
Q |
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| T |
36556595 |
tgacacttttagaactgcaaagaaacatattaaagctcatattcatgaaggaatggttggtgatcatgatgattctcctgatgttgcacacaacaatgtt |
36556496 |
T |
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| Q |
206 |
aatgtgttgggacattgatttgtttggatcatgatgatgatggtgtttgaggagaggnnnnnnnnctgcaagtgatgagttgggttt-agttagaataat |
304 |
Q |
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| T |
36556495 |
aatgtgttgggacattgatttgtttggatcatgatgatgatggtgtttgaggagagg-tttttttctgcaagtgatgagttgggtttaatttagaataat |
36556397 |
T |
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| Q |
305 |
cagttgcatttagttgcaaatcttagagttcca |
337 |
Q |
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| T |
36556396 |
cagttgcatttagttgcaaatcttagagttcca |
36556364 |
T |
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