View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4362-Insertion-20 (Length: 342)
Name: NF4362-Insertion-20
Description: NF4362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4362-Insertion-20 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 94 - 342
Target Start/End: Complemental strand, 33534556 - 33534308
Alignment:
| Q |
94 |
atatactgtacttagacatgctttttgaccaaagtttggtgcacaaacataagcatcttcttgtactccatttttcaaagtatttggacaaggttggttt |
193 |
Q |
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| T |
33534556 |
atatactgtacttagacatgctttttgaccaaagtttggtgcacaaacataagcatcttcttgtactccatttttcaaagtatttggacaaggttggttt |
33534457 |
T |
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| Q |
194 |
ggtgaaatgccttgcatgccgacaataacttcgcgcgcaaggaatggttcttgatcatccatgtccaaatccatcgatttcaccattccaagatcatccg |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33534456 |
ggtgaaatgccttgcatgccgacaataacttcgcgcgcaaggaatggttcttgatcatccatgtccaaatccatcgatttcaccattccaagatcatccg |
33534357 |
T |
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| Q |
294 |
tgcttttgtaaacgctaagcagttttctcatgaacccattcggctccat |
342 |
Q |
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| T |
33534356 |
tgcttttgtaaacgctaagcagttttctcatgaacccattcggctccat |
33534308 |
T |
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