View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4362-Insertion-3 (Length: 973)
Name: NF4362-Insertion-3
Description: NF4362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4362-Insertion-3 |
 | |
|
| [»] chr7 (28 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 149 - 493
Target Start/End: Original strand, 30199956 - 30200308
Alignment:
| Q |
149 |
gggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaagtg |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30199956 |
gggggcgtttgtttcacggatgcaaaaattattccctggaataactttcccaggaatatattccttggaattatattcctaggaatattttaaaaaagtg |
30200055 |
T |
|
| Q |
241 |
tttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaatttc |
340 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
30200056 |
tttggttaccaatttgaattccttagaactttctttctaaattcctgggaatactaaaaatatgtttggtttaaaatgtataatctcaggaataaatgtc |
30200155 |
T |
|
| Q |
341 |
aaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaaggta |
440 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30200156 |
aaaattattaaaatatccttttacattcaatagatgaaaaataatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaaggta |
30200255 |
T |
|
| Q |
441 |
ttggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30200256 |
ttggtcagggtatatacttgttttttaatacataacaagagtaccctgtttca |
30200308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 146 - 492
Target Start/End: Original strand, 27365680 - 27366034
Alignment:
| Q |
146 |
ttagggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaa |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27365680 |
ttagggggcgtttgtttcacggatgcaaaaattattctctggaataacttttccaggaatatattccttggaattatattcctaggaatattttaaaaaa |
27365779 |
T |
|
| Q |
238 |
gtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaat |
337 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27365780 |
gtgtttggttaccaatttgaattctttggaactttctttctaaattcctgggaatactaaaaatatgtttggtttaaaatgtataatctcaggaataaat |
27365879 |
T |
|
| Q |
338 |
ttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaag |
437 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
27365880 |
gtcaaaattattaaaatacccttttacattcaatagatgaaaaataatattttttatgttattttcaatcaagcaaagtaaattatgtgagttaacaaag |
27365979 |
T |
|
| Q |
438 |
gtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttc |
492 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27365980 |
gtattggtcatgatatatacttgttttttaatacataacaagagtaccctgtttc |
27366034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 240 - 493
Target Start/End: Original strand, 45112488 - 45112742
Alignment:
| Q |
240 |
gtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaattt |
339 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
45112488 |
gtttggttaccaatttgaattccttggaactttctttctaaattactaagaatactaaaaatatgtttggtttaaaatgtataatcccaggaataaatgt |
45112587 |
T |
|
| Q |
340 |
caaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatc-aagcaaagtaaattatgtgagtcaacaaagg |
438 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
45112588 |
caaaattattaaaatacccttttacattcaatagatgaaaaataatatttttcatgttatttttaatctaagcaaagtaaattatgtgagtcaacaaagg |
45112687 |
T |
|
| Q |
439 |
tattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
45112688 |
tattggtcagggtatatactttttttttaatacataacaagagtaccctgtttca |
45112742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 45112430 - 45112474
Alignment:
| Q |
146 |
ttagggggcgtttgtttcacggatgcaaaaattattctctggaat |
190 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
45112430 |
ttagggggcgtttgtttcacggatgcaaaaattattccctggaat |
45112474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 139 - 493
Target Start/End: Complemental strand, 20321338 - 20320977
Alignment:
| Q |
139 |
aatacttttagggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattt |
230 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
20321338 |
aatacctttagggggtgtttgtttcacggatgcaaaaattattccctggaataactttcccaggaatatattccttggaattatattcctaggaatattt |
20321239 |
T |
|
| Q |
231 |
taaaaaagtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccagg |
330 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
20321238 |
taaaaaagtgtttggttaccaatttgaattccttggaactttctttctaaattcctaggaatactaaaaatatgtttggtttaaaatgtataatcccagg |
20321139 |
T |
|
| Q |
331 |
aataaatttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtc |
430 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||||||||||| |
|
|
| T |
20321138 |
aataaatgtcaaaattattaaaatacccttttacattcaatagatgaaaaataatatttttcatgtt-ttttttatcaaggaaagtaaattatgtgagtc |
20321040 |
T |
|
| Q |
431 |
aacaaaggtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
20321039 |
aacaaaggtattggtcagggtatatacttattttttaatacataacaagagtaccctgtttca |
20320977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 155 - 493
Target Start/End: Complemental strand, 34152067 - 34151722
Alignment:
| Q |
155 |
gtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaagtgtttggt |
246 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34152067 |
gtttgtttcacggatgcaaaaattattccctggaataactttcccaggaatatattccttggaattatattcctaggaatattttaaaaaagtgtttggt |
34151968 |
T |
|
| Q |
247 |
taccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaatttcaaaatt |
346 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
34151967 |
taccaatttgaattccttggaactttctttctaaattcctaggaatactaaaaatatgtttggtttaaaatgtataatcccaggaataaatgtcaaaatt |
34151868 |
T |
|
| Q |
347 |
attaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaaggtattggtc |
446 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
34151867 |
attaaaatacccttttacattcaatagatgaaaaataatatttttcatgtt-ttttttatcaaggaaagtaaattatgtgagtcaacaaaggtattggtc |
34151769 |
T |
|
| Q |
447 |
aggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||| ||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
34151768 |
agggtatatacttattttttaatacataacaagagtaccctgtttca |
34151722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 289 - 412
Target Start/End: Original strand, 28983364 - 28983487
Alignment:
| Q |
289 |
gaatactaaaaatatgtttggtttaaaatgtataattccaggaataaatttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatt |
388 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
28983364 |
gaatactaaaaatatgtttggtttaaaatgtataatcctaggaataaatgtcaaaattattaaaatacccttttacattcaatagatgaaaaataatatt |
28983463 |
T |
|
| Q |
389 |
tttcatgttatttttaatcaagca |
412 |
Q |
| |
|
||||||||| |||||||||||||| |
|
|
| T |
28983464 |
tttcatgttttttttaatcaagca |
28983487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 145 - 356
Target Start/End: Complemental strand, 17654046 - 17653840
Alignment:
| Q |
145 |
tttagggggcgtttgtttcacggatgcaaaaattattctctggaataactttcttattcctgggaattatattcctaggaat-attttaaaaaagtgttt |
243 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| | |||||||| ||| | |||| | || |||||| |||| ||||| ||||||| ||| |
|
|
| T |
17654046 |
tttaggggacgtttgtttcacggatgcaaaaattattttttggaataatttttt-----ctggaa--tacattccttagaattatttttaaaaagtattt |
17653954 |
T |
|
| Q |
244 |
ggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttgg-tttaaaatgtataattccaggaataaatttcaa |
342 |
Q |
| |
|
|||||| | |||||||||| ||||| ||||| ||||||| | ||||| |||||||||| ||| |||||||| |||||| ||| ||||||| || | |
|
|
| T |
17653953 |
ggttactagtttgaattcccgagaactgtctttgtaaattcatgggaatagtaaaaatatgcttgactttaaaatatataatcccaataataaatgtcta |
17653854 |
T |
|
| Q |
343 |
aattattaaaatac |
356 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
17653853 |
aattattaaaatac |
17653840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 28983281 - 28983330
Alignment:
| Q |
148 |
agggggcgtttgtttcacggatgcaaaaattattctctggaataactttc |
197 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28983281 |
agggagcgtttgtttcacggatgcaaaaattatttcatggaataactttc |
28983330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 148 - 492
Target Start/End: Complemental strand, 20267507 - 20267156
Alignment:
| Q |
148 |
agggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaagt |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
20267507 |
agggggcgtttgtttcacggatgcaaaaattattccctggaataactttcccaggaatatattccttggaattatattcctaggaatattttaaaaaagt |
20267408 |
T |
|
| Q |
240 |
gtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaattt |
339 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| ||||||| | |
|
|
| T |
20267407 |
gtttggttaccaatttgaattccttggaactttctttctaaattcctgggaatactaaaaatatgtttggtt-aaaatgtataatcccagaaataaatgt |
20267309 |
T |
|
| Q |
340 |
caaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaaggt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20267308 |
caaaattattaaaatacccttttacattcaatagatgaaaaataatatttttcatgttattttcaatcaagcaaagtaaattatgtgagtcaacaaaggt |
20267209 |
T |
|
| Q |
440 |
attggtcaggatatatacttgttttttaatatataacaagagtaccctgtttc |
492 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
20267208 |
attggtcaggatatatacttgttttttaatacataacaagagtaccttgtttc |
20267156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 148 - 492
Target Start/End: Complemental strand, 21054136 - 21053785
Alignment:
| Q |
148 |
agggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaagt |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21054136 |
agggggcgtttgtttcacggatgcaaaaattattccctggaataactttcccaggaatatattccttggaattatattcctaggaatattttaaaaaagt |
21054037 |
T |
|
| Q |
240 |
gtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaattt |
339 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| ||||||| | |
|
|
| T |
21054036 |
gtttggttaccaatttgaattccttggaactttctttctaaattcctgggaatactaaaaatatgtttggtt-aaaatgtataatcccagaaataaatgt |
21053938 |
T |
|
| Q |
340 |
caaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaaggt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21053937 |
caaaattattaaaatacccttttacattcaatagatgaaaaataatatttttcatgttattttcaatcaagcaaagtaaattatgtgagtcaacaaaggt |
21053838 |
T |
|
| Q |
440 |
attggtcaggatatatacttgttttttaatatataacaagagtaccctgtttc |
492 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
21053837 |
attggtcaggatatatacttgttttttaatacataacaagagtaccttgtttc |
21053785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 207 - 493
Target Start/End: Complemental strand, 15363265 - 15362979
Alignment:
| Q |
207 |
ggaattatattcctaggaatattttaaaaaagtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtt |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
15363265 |
ggaattatattcctaggaatattttaaaaaagtgtttggttaccaatttgaattccttggaactttctttctaaattcctgggaatactaaaaatatgtt |
15363166 |
T |
|
| Q |
307 |
tggtttaaaatgtataattccaggaataaatttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaat |
406 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15363165 |
tggtttaaaatgtataatcccaggaataaatgtcaaaattattaaaatacccttttacattaaatagatgaaaaataatatttttcatgttatttttaat |
15363066 |
T |
|
| Q |
407 |
caagcaaagtaaattatgtgagtcaacaaaggtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
15363065 |
caagcaaagtaaattatgtgagtcaacaaaggtattggtcagcgtatatacttgttttttaatacataacaagagtaccatgtttca |
15362979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 146 - 493
Target Start/End: Complemental strand, 18630758 - 18630408
Alignment:
| Q |
146 |
ttagggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaa |
237 |
Q |
| |
|
||||| ||||||||||||| |||| |||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18630758 |
ttaggaggcgtttgtttcatggatacaaaaattattccctggaataacattcccaggaatatattccttggaattatattcctaggaatattttaaaaaa |
18630659 |
T |
|
| Q |
238 |
gtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaat |
337 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||| |
|
|
| T |
18630658 |
gtgtttggttaccaatttgaattccttggaactttctttctaaattcctgggaatactagaaatatgttt-----aaaatgtataatcccaggaataaat |
18630564 |
T |
|
| Q |
338 |
ttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaag |
437 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18630563 |
gtcaaaattattaaaatacccttttacattcaatagatgaaaaataatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaag |
18630464 |
T |
|
| Q |
438 |
gtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
18630463 |
gtattggtcagggtatatacttgttttttaatacataacaagagtactctgtttca |
18630408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 146 - 493
Target Start/End: Complemental strand, 18167204 - 18166854
Alignment:
| Q |
146 |
ttagggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaa |
237 |
Q |
| |
|
||||| ||||||||||||| |||| |||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18167204 |
ttaggaggcgtttgtttcatggatacaaaaattattccctggaataacattcccaggaatatattccttggaattatattcctaggaatattttaaaaaa |
18167105 |
T |
|
| Q |
238 |
gtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaat |
337 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||| |
|
|
| T |
18167104 |
gtgtttggttaccaatttgaattccttggaactttctttctaaattcctgggaatactagaaatatgttt-----aaaatgtataatcccaggaataaat |
18167010 |
T |
|
| Q |
338 |
ttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaag |
437 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18167009 |
gtcaaaattattaaaatacccttttacattcaatagatgaaaaataatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaag |
18166910 |
T |
|
| Q |
438 |
gtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
18166909 |
gtattggtcagagtatatacttgttttttaatacataacaagagtactctgtttca |
18166854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 262; Significance: 1e-145; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 147 - 493
Target Start/End: Complemental strand, 7956020 - 7955666
Alignment:
| Q |
147 |
tagggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaag |
238 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
7956020 |
taggggccgtttgtttcacagatgcaaaaattattccctggaataattttcccaggaatatattccttggaattatattcctaggaatattttaaaaaag |
7955921 |
T |
|
| Q |
239 |
tgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaatt |
338 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
7955920 |
tgtttggttaccaatttgaattccttggaactttctttctaaattcctgggaatactaaaaatatgtttggtttaaaatgtataatcccaggaataaatg |
7955821 |
T |
|
| Q |
339 |
tcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaagg |
438 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
7955820 |
tcaaaattattaaaatacccttttacattaaattgatgaaaaataatatttttcatgttatttttaatcaagcaaagtaaattatgcgagtcaacaaagg |
7955721 |
T |
|
| Q |
439 |
tattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
7955720 |
tattggtcagggtatatacttgttttttaatacataacaagagtaccctgtttca |
7955666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 326 - 493
Target Start/End: Complemental strand, 1593230 - 1593063
Alignment:
| Q |
326 |
ccaggaataaatttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgt |
425 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1593230 |
ccaggaataaatgtcaaaattattaaaatacccttttacattcaatagatcaaaaataatatttttcacgttatttttaatcaagcaaagtaaattatgt |
1593131 |
T |
|
| Q |
426 |
gagtcaacaaaggtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1593130 |
gagtcaacaaaggtattggtcatggtatatacttgttttttaatacataacaagagtaccctgtttca |
1593063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 148 - 493
Target Start/End: Complemental strand, 12336651 - 12336298
Alignment:
| Q |
148 |
agggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaagt |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
12336651 |
agggggcgtttgtttcacggatgcaaaaattattccctggaataattttcccaggaatatatttcttggaattatattcctaggaatattttaaaaaagt |
12336552 |
T |
|
| Q |
240 |
gtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaattt |
339 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
12336551 |
gtttggttaccaatttgaatttcttggaactttctttctaaattcctgggaatactaaaaatatgtttggtttaaaatgtataatcccaggaataaatgt |
12336452 |
T |
|
| Q |
340 |
caaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaaggt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12336451 |
caaaattattaaaatacccttttacattaaatagatgaaaaataatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaaggt |
12336352 |
T |
|
| Q |
440 |
attggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
12336351 |
attggtcagcgtatatacttgttttttaatacataacaagagtaccatgtttca |
12336298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 207 - 493
Target Start/End: Original strand, 603761 - 604047
Alignment:
| Q |
207 |
ggaattatattcctaggaatattttaaaaaagtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtt |
306 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
603761 |
ggaattatatttttaggaatatttttaaaaagtgtttggttaccaatttgaattctttggaactttctttctaaatttttgggaatactaaaaatatgtt |
603860 |
T |
|
| Q |
307 |
tggtttaaaatgtataattccaggaataaatttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaat |
406 |
Q |
| |
|
| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
603861 |
ttatttaaaatgtataatcccaggaataaatgtcaaaattattaatataccctttgacattcaatagatgaaaaataatatttttcatgttatttttaat |
603960 |
T |
|
| Q |
407 |
caagcaaagtaaattatgtgagtcaacaaaggtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
603961 |
caagcaaagtaaattatgcgagtcaacaaaggtattagtcaggatatatatttgttttttaatacataataagagtaccctgtttca |
604047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 252; Significance: 1e-139; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-139
Query Start/End: Original strand, 598 - 973
Target Start/End: Complemental strand, 22805889 - 22805514
Alignment:
| Q |
598 |
cttataaataataaacaccgaacagcacaacagaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgtt |
697 |
Q |
| |
|
||||||||||||||||||||||||| || ||| |||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||| |||| |
|
|
| T |
22805889 |
cttataaataataaacaccgaacagaactacacaagcattattcattctcaaactataatcatgttcctcaaacttgtgtttatgttgttttttcatgtt |
22805790 |
T |
|
| Q |
698 |
acattggtaataagtgaagacaacagtttcatatataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttac |
797 |
Q |
| |
|
||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |
|
|
| T |
22805789 |
acattagtagcaagtgaagataacagtttcatctataatggattccaatcatcacatttatatcttgatggttttgctgagttaacctcagatggcatac |
22805690 |
T |
|
| Q |
798 |
taagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctc |
897 |
Q |
| |
|
|||||||||||||||| | |||| || | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22805689 |
taagactcaccaatgatacagaacaagtaataggtcatgctttctatccaaatccaatagttttcaaaaacacttccagtgaaagtgtgtcttctttctc |
22805590 |
T |
|
| Q |
898 |
aactacttttgtatttgccataatacctcaatatccaactcttggtggccatggaattgtttttgttatttctcca |
973 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||||| |
|
|
| T |
22805589 |
aactacttttgtatttgccataatacctcaatatccaccttttactggccatggaattgtttttgttctttctcca |
22805514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 145 - 493
Target Start/End: Original strand, 21867420 - 21867771
Alignment:
| Q |
145 |
tttagggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaa |
236 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||| |||| |
|
|
| T |
21867420 |
tttagggggcgtttgtttcacggatacaaaaattattctctggaataacattcccaggaatatattccttggaattatatttctaggaatatttttaaaa |
21867519 |
T |
|
| Q |
237 |
agtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaa |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
21867520 |
agtgtttggttaccaatttgaattccttggaactttctttctaaattcctggaaatactaaaaatatgttt-----aaaatgtataatcccaggaataaa |
21867614 |
T |
|
| Q |
337 |
tttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaa |
436 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21867615 |
tgtcaaaattattaaaatacccttttacattcaatagatgaaaaataatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaa |
21867714 |
T |
|
| Q |
437 |
ggtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21867715 |
ggtattggtcagggtatatacttgttttttaatacataacaagagtaccctgtttca |
21867771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 642 - 973
Target Start/End: Complemental strand, 22889828 - 22889497
Alignment:
| Q |
642 |
attcacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgttacattggtaataagtgaagacaacagtttcatatataatggatt |
741 |
Q |
| |
|
|||||||| ||||||| |||||| ||| || |||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22889828 |
attcacaacctataatcatgttcctcagacatgtgttcatgttgttttttcatgttacattggttgcaagtgaagacaacagtttcatatataatggatt |
22889729 |
T |
|
| Q |
742 |
ccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcaccaatgaaatagaaagagccaaaggacatgctttc |
841 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||||||| ||||||||||| |||| |
|
|
| T |
22889728 |
ccaatcatcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttc |
22889629 |
T |
|
| Q |
842 |
tatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccaactcttg |
941 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||| |
|
|
| T |
22889628 |
tatccaaatccaatagttttcaaaaacacttccagtgaaagcgtgtcttctttctcaactacttttttatttgccataatacctcaatatgcaaatattg |
22889529 |
T |
|
| Q |
942 |
gtggccatggaattgtttttgttatttctcca |
973 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
22889528 |
gtggccatggaattgtttttgttatttctcca |
22889497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 598 - 972
Target Start/End: Complemental strand, 22815609 - 22815233
Alignment:
| Q |
598 |
cttataaataataaa-caccgaacagcacaacagaagcatcattcattcacaaacta-taatgatgttcatcaaacttgtgtttatgttattttttcttg |
695 |
Q |
| |
|
||||||||||| ||| || | ||||| || |||||||||| ||||||||||||||| |||| |||||| |||||| |||||| ||||| |||||||| | |
|
|
| T |
22815609 |
cttataaataacaaaacatcaaacagaactacagaagcattgttcattcacaaactaataatcatgttcctcaaacatgtgttcatgttgttttttctcg |
22815510 |
T |
|
| Q |
696 |
ttacattggtaataagtgaagacaacagtttcatatataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggctt |
795 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22815509 |
ttacattggtagcaagtgtagacaacagtttcatatataatggattccaatcatcacatttaaatcttgatggtattgctgagttaacctcaaatggctt |
22815410 |
T |
|
| Q |
796 |
actaagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttc |
895 |
Q |
| |
|
||||| |||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
22815409 |
actaaaactcaccaatgatacagaaagagccaaaggatatgctttctatccaaatcctatagttttcaaaaacacttccaatgaaagtgtgtcttctttc |
22815310 |
T |
|
| Q |
896 |
tcaactacttttgtatttgccataatacctcaatatccaactcttggtggccatggaattgtttttgttatttctcc |
972 |
Q |
| |
|
|||||||||||||| ||||| |||| ||||||||||||| || || ||||||| ||||||||||||||| ||||||| |
|
|
| T |
22815309 |
tcaactacttttgtgtttgcaataagacctcaatatccaccttttagtggccaaggaattgtttttgttctttctcc |
22815233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 598 - 969
Target Start/End: Complemental strand, 22810227 - 22809853
Alignment:
| Q |
598 |
cttataaataataaacaccgaacagcacaac---agaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttctt |
694 |
Q |
| |
|
||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
22810227 |
cttataaataataaacattgaacagcagaactacagaagcattattcattcacaaactataatcatgttcctcaagcttgtgtttatgttgttttttctt |
22810128 |
T |
|
| Q |
695 |
gttacattggtaataagtgaagacaacagtttcatatataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggct |
794 |
Q |
| |
|
|||||||| ||| |||| |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
22810127 |
gttacattagtagcaagtaaagataacagtttcatctataatggtttccaatcatcacatttatatcttgatggtattgctgagttaaccccagatggct |
22810028 |
T |
|
| Q |
795 |
tactaagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttcttt |
894 |
Q |
| |
|
||||||||||||||||||| | |||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
22810027 |
tactaagactcaccaatgatacagaacatgaaaaaggacatgctttctatccaaatcctgtagttttcaaaaacactatcagtgaaagtgtatcttcttt |
22809928 |
T |
|
| Q |
895 |
ctcaactacttttgtatttgccataatacctcaatatccaactcttggtggccatggaattgtttttgttatttc |
969 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||||| |||| |
|
|
| T |
22809927 |
ctcaactacttttgtatttgccataagacctcaatatccaactcttagttcccatggaattgtatttgttgtttc |
22809853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 145 - 493
Target Start/End: Complemental strand, 47024579 - 47024220
Alignment:
| Q |
145 |
tttagggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaa |
236 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| ||| ||||||||| | ||||||| ||||||||||| ||| |||||||||||||| |
|
|
| T |
47024579 |
tttaggaggcgtttgtttcacggatgcaaaaattatttcctgaaataactttttcaggaatatattccttggaattatatttctatgaatattttaaaaa |
47024480 |
T |
|
| Q |
237 |
agtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaa |
336 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47024479 |
agtgtttggttaccaatttgaatttcttggaactttctttctaaattcttgggaatactaaaaatatgtttggtttaaaatgtataatcccaggaataaa |
47024380 |
T |
|
| Q |
337 |
tttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaa |
436 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
47024379 |
tgtcaaaattattaaaatacccttttacattcaatagatgaaaaatagta-ttttcatgttttttttaataaagcaaagtaaattatgtgagtcaacaaa |
47024281 |
T |
|
| Q |
437 |
ggtattggtcaggatatatac----ttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
|||||||||||| ||||||| || |||||||||| |||||||||||||||| ||||| |
|
|
| T |
47024280 |
agtattggtcagggtatatacttattttttttttaatacataacaagagtaccctctttca |
47024220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 598 - 972
Target Start/End: Complemental strand, 22840638 - 22840258
Alignment:
| Q |
598 |
cttataaataataaacaccgaacagcacaacagaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgtt |
697 |
Q |
| |
|
||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||| |||| |
|
|
| T |
22840638 |
cttataaataataaacaccaaacagaactacagaagcatcatttattcacaaactataatcatgttcatcaaacttgtgttcatgttgttttttcatgtt |
22840539 |
T |
|
| Q |
698 |
acattggtaataagtgaagacaacagtttcat------atataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatg |
791 |
Q |
| |
|
||||||||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| || |
|
|
| T |
22840538 |
acattggtagcaagtatagacaacagtttcatctataaatataatggattccaatcatcaaatttatatcttgatggtaccgctgagttagcctcaactg |
22840439 |
T |
|
| Q |
792 |
gcttactaagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttc |
891 |
Q |
| |
|
|||||||||||||||||||||| | | || || |||||||| ||||||||||||||||| |||||||||||||||||||| || | |||||| ||||| |
|
|
| T |
22840438 |
gcttactaagactcaccaatgatacaaaacaagaaaaaggacaagctttctatccaaatcctatagttttcaaaaacacttccagcggaagtgtttcttc |
22840339 |
T |
|
| Q |
892 |
tttctcaactacttttgtatttgccataatacctcaatatccaactcttggtggccatggaattgtttttgttatttctcc |
972 |
Q |
| |
|
|||||||||||||||||||||| |||||| | || ||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
22840338 |
tttctcaactacttttgtattttccataaaatcttcatatccaactcttagtggccatggaattgttttcgttatttctcc |
22840258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 645 - 972
Target Start/End: Complemental strand, 22876449 - 22876122
Alignment:
| Q |
645 |
cacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgttacattggtaataagtgaagacaacagtttcatatataatggattcca |
744 |
Q |
| |
|
||||||||||||| |||||| ||| |||||||| ||||| |||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
22876449 |
cacaaactataatcatgttcttcaggcttgtgttcatgttgttttatcttgttacattggtagcaagtgaagaaaacagtttcatctataatggattcca |
22876350 |
T |
|
| Q |
745 |
atcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcaccaatgaaatagaaagagccaaaggacatgctttctat |
844 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||| | |||||||||| ||||||| |
|
|
| T |
22876349 |
atcatcaaatttatatcttgatggtattgctgagttaacctcaaatggcttactaaaactcaccaatgatacagaatatgaaaaaggacatggtttctat |
22876250 |
T |
|
| Q |
845 |
ccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccaactcttggtg |
944 |
Q |
| |
|
|||||||| |||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||| |
|
|
| T |
22876249 |
ccaaatcctatagttttcaaaaacacttccaatggaagtgtgtcttctttctcaactacttttgtatttgccataagacctcaatatccaactattagtg |
22876150 |
T |
|
| Q |
945 |
gccatggaattgtttttgttatttctcc |
972 |
Q |
| |
|
| ||||||||||||||||| ||||||| |
|
|
| T |
22876149 |
gtgatggaattgtttttgttgtttctcc |
22876122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 598 - 972
Target Start/End: Complemental strand, 22831611 - 22831237
Alignment:
| Q |
598 |
cttataaataataaacaccgaacagcacaacagaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgtt |
697 |
Q |
| |
|
||||||||||||||||||||||||| || ||| |||||| |||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||||| |
|
|
| T |
22831611 |
cttataaataataaacaccgaacagaactacacaagcattattcattcacaaactataatcatgttcctcaagcttgtgtttatgttgttttttcttgtt |
22831512 |
T |
|
| Q |
698 |
acattggtaataagtgaagacaacagtttcatatataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttac |
797 |
Q |
| |
|
||||| ||| ||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
22831511 |
acatttgtagcaagtgaagacagcagtttcatctataatggtttccaatcatcacatttatatcttgatggtattgctgagttaacttcagatggcttac |
22831412 |
T |
|
| Q |
798 |
taagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctc |
897 |
Q |
| |
|
|||||||||||||||| | | || | || | |||||||||||||||||| |||||||| ||||||||||| | || ||||||||| |||||||| |
|
|
| T |
22831411 |
taagactcaccaatgataccgggccagatacagcatatgctttctatccaaatcatatagtttttaaaaacacttcgaatgcaagtgtgtcatctttctc |
22831312 |
T |
|
| Q |
898 |
aactacttttgtatttgccataatacctcaatatccaactcttggtggccatggaattgtttttgttatttctcc |
972 |
Q |
| |
|
|||||||||||||||| |||||| | | |||||| || || ||||||||||||||||||||||| ||||||| |
|
|
| T |
22831311 |
aactacttttgtatttaccataaaatccatgtatccatctattagtggccatggaattgtttttgttctttctcc |
22831237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 598 - 920
Target Start/End: Complemental strand, 22858999 - 22858677
Alignment:
| Q |
598 |
cttataaataataaacaccgaacagcacaacagaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgtt |
697 |
Q |
| |
|
||||||||||| ||||||||||||| || ||| |||||| ||||||||||||||| ||| |||||| |||| |||| |||||||||| ||| |||||| |
|
|
| T |
22858999 |
cttataaataacaaacaccgaacagaactacacaagcattgttcattcacaaactaaaatcatgttcctcaagtttgtctttatgttatgtttgcttgtt |
22858900 |
T |
|
| Q |
698 |
acattggtaataagtgaagacaacagtttcatatataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttac |
797 |
Q |
| |
|
||||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
22858899 |
acattggtagcaagtgaagacaacggtttcatctataaaggattccaatcatcacatttatatcttgatggtattgctgagttaacttcaactggcttac |
22858800 |
T |
|
| Q |
798 |
taagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctc |
897 |
Q |
| |
|
|||||||||||||||| || | || | || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22858799 |
taagactcaccaatgatatcgggcaagatacagcacatgctttctatccaaatcctatagttttcaaaaacacttctagtgaaactgtgtcttctttctc |
22858700 |
T |
|
| Q |
898 |
aactacttttgtatttgccataa |
920 |
Q |
| |
|
|||||||||| |||||||||||| |
|
|
| T |
22858699 |
aactacttttttatttgccataa |
22858677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 598 - 920
Target Start/End: Complemental strand, 22842753 - 22842422
Alignment:
| Q |
598 |
cttataaataataaacaccgaacagcacaac---agaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttctt |
694 |
Q |
| |
|
||||||||||||||||| |||||||| ||| |||||||| ||||||||||||| ||||| |||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
22842753 |
cttataaataataaacattgaacagcagaactacagaagcattgttcattcacaaacaataatcatgttcctcaagcttgtgtttatgttgttttttctt |
22842654 |
T |
|
| Q |
695 |
gttacattggtaataagtgaagacaacagtttcatatataat------ggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaa |
788 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22842653 |
gttacattggtagcaagtgaagacaacagtttcatctataataatagaggattccaatcatttcatttgtatcttgatggtattgctgagttaacctcag |
22842554 |
T |
|
| Q |
789 |
atggcttactaagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtc |
888 |
Q |
| |
|
|||||||| ||||||||||||||| | | || | |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22842553 |
gtggcttaccaagactcaccaatgatacaaaacaatacaaaggtcatgctttatatccaaaaccaatagttttcaaaaacacttctagtgaaagtgtgtc |
22842454 |
T |
|
| Q |
889 |
ttctttctcaactacttttgtatttgccataa |
920 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |
|
|
| T |
22842453 |
ttctttctcaactacttttttatttgccataa |
22842422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 650 - 964
Target Start/End: Complemental strand, 22898791 - 22898477
Alignment:
| Q |
650 |
actataatgatgttcatcaaacttgtgtttatgttattttttcttgttacattggtaataagtgaagacaacagtttcatatataatggattccaatcat |
749 |
Q |
| |
|
|||||||| |||||| |||| |||| ||| ||||| ||||||| ||||||||||||| |||| |||| ||||||||||| |||||||| |||||||||| |
|
|
| T |
22898791 |
actataatcatgttcctcaagcttgcgttcatgttgttttttcatgttacattggtagcaagtaaagataacagtttcatctataatggtttccaatcat |
22898692 |
T |
|
| Q |
750 |
cacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaa |
849 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||| | | || |||| |||||||||||||||||| |
|
|
| T |
22898691 |
cacatttatatcttgatggtattgctaatttaacctccaatggcttacttagactcaccaatgataccaagcaagaaaaagcacatgctttctatccaaa |
22898592 |
T |
|
| Q |
850 |
tccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccaactcttggtggccat |
949 |
Q |
| |
|
||| ||||||||||| |||||||||| || |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
22898591 |
tcctatagttttcaagaacacttctaatggaagtgtttcttctttctcaactacttttgtgtttgccataagacctcaatatccaactcttagtggccat |
22898492 |
T |
|
| Q |
950 |
ggaattgtttttgtt |
964 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22898491 |
ggaattgtttttgtt |
22898477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 601 - 972
Target Start/End: Complemental strand, 22894520 - 22894150
Alignment:
| Q |
601 |
ataaataataaacaccgaacagcacaacagaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgttaca |
700 |
Q |
| |
|
||||||||||||||| |||||| || | |||||| ||| |||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
22894520 |
ataaataataaacactgaacagaactgtataagcattatt-attcacaaactataatcatgttcctcaggcttgtgtttatgttgttttttcttgttaca |
22894422 |
T |
|
| Q |
701 |
ttggtaataagtgaagacaacagtttcatatataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaa |
800 |
Q |
| |
|
|||||| |||||||||||| |||||||| ||||||| ||||||||||| ||||| |||||||||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
22894421 |
ttggtaccaagtgaagacaaaagtttcatctataatgatttccaatcatctcatttgtatcttgatggtattgctaatttaacctccaatggcttactaa |
22894322 |
T |
|
| Q |
801 |
gactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaac |
900 |
Q |
| |
|
||||||||||||| | || || |||| |||||||||||||||||| || |||||||| || |||||||| | || |||||| ||||| |||||||| |
|
|
| T |
22894321 |
gactcaccaatgacaccaaacaagaaaaagcacatgctttctatccaaaccctatagttttgaagaacacttccaatggaagtgtttcttcattctcaac |
22894222 |
T |
|
| Q |
901 |
tacttttgtatttgccataatacctcaatatccaactcttggtggccatggaattgtttttgttatttctcc |
972 |
Q |
| |
|
|||||||||||||||||||| || |||| ||||||| | ||||||||||||||||||||||| ||||||| |
|
|
| T |
22894221 |
tacttttgtatttgccataagacatcaaggtccaacttatagtggccatggaattgtttttgttctttctcc |
22894150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 672 - 918
Target Start/End: Complemental strand, 22881076 - 22880824
Alignment:
| Q |
672 |
ttgtgtttatgttattttttcttgttacattggtaataagtgaagacaacagtttcatatataa------tggattccaatcatcacatttatatcttga |
765 |
Q |
| |
|
||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
22881076 |
ttgtgtttatgttgttttttcttgttacattgatagcaagtgaagaaaacagtttcatctataaatacaatggattccattcatcacatttatatcttga |
22880977 |
T |
|
| Q |
766 |
tggtattgctgagttaacctcaaatggcttactaagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaa |
865 |
Q |
| |
|
|||||||||| || ||| |||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
22880976 |
tggtattgctaaggtaaactcaaatggcttactaagactcaccaatgacacagaaagagccaaaggatatgctttctatccaaatcctatagttttcaaa |
22880877 |
T |
|
| Q |
866 |
aacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccat |
918 |
Q |
| |
|
|||||||| | ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22880876 |
aacacttccaatgaaagtgtgtattctttctcaactacttttgtatttgccat |
22880824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 834 - 969
Target Start/End: Complemental strand, 22885934 - 22885801
Alignment:
| Q |
834 |
atgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatcc |
933 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||| |||| | || ||||||| |
|
|
| T |
22885934 |
atgctttctatccaaatcctatagttttcaaaaacactc--agtgaaagtgtgtcttctttctcaactaattctttatttgctataaaatcttaatatcc |
22885837 |
T |
|
| Q |
934 |
aactcttggtggccatggaattgtttttgttatttc |
969 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||| |
|
|
| T |
22885836 |
aactcatagtggccatggaattgtttttgttatttc |
22885801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 22816361 - 22816237
Alignment:
| Q |
16 |
tatgaaattgagtcaaaaccaatatacatatttttatccttctaccacgtattcattcatcattttgtttgcagcataatcaataataaccggtcaagtt |
115 |
Q |
| |
|
|||||||||||||||||||| | || || |||||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||| ||||||| |
|
|
| T |
22816361 |
tatgaaattgagtcaaaacccacttatatctttttatccttccaccacgtattaattcatcattttatttgcagcataatcaatagtaataggtcaaggc |
22816262 |
T |
|
| Q |
116 |
cacacattcaagtgtgaaattaaaa |
140 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
22816261 |
cacacattcaagtgtgaaattaaaa |
22816237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 722 - 973
Target Start/End: Complemental strand, 22914124 - 22913873
Alignment:
| Q |
722 |
agtttcatatataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcaccaatgaaatagaaa |
821 |
Q |
| |
|
||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||| | ||||||| | | | | |
|
|
| T |
22914124 |
agtttcacatataatggtttcaaatcatcacatttatatcttgatggtgttgctgaattaacctcaaatggtttactaagattaaccaatg-attcaaga |
22914026 |
T |
|
| Q |
822 |
gagccaaa-ggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttgtatttgccataa |
920 |
Q |
| |
|
| | ||| || ||||||||||||||||| || ||||||||||| || |||| | ||| ||||||||||| ||||||||||| |||||||||| |
|
|
| T |
22914025 |
caacaaaagggtcatgctttctatccaaaccctatagttttcaacaatggaagtagtagtaatgtatcttctttctctactacttttgtttttgccataa |
22913926 |
T |
|
| Q |
921 |
tacctcaatatccaactcttggtggccatggaattgtttttgttatttctcca |
973 |
Q |
| |
|
| || | | ||| | |||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
22913925 |
aatctgagtttcctaatcttagtggccatggaattgtttttgttctttctcca |
22913873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 22832048 - 22831941
Alignment:
| Q |
27 |
gtcaaaaccaatatacatatttttatccttctaccacgtattcattcatcattttgtttgcagcataatcaataataaccggtcaagttcacacattcaa |
126 |
Q |
| |
|
|||||||| || ||| || |||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||||| |
|
|
| T |
22832048 |
gtcaaaacaaacatatatctttttatccttccaccacatattcattcatcatttgatttgcagcataatcaatagtaacttgtcaagtccacacattcaa |
22831949 |
T |
|
| Q |
127 |
gtgtgaaa |
134 |
Q |
| |
|
|| ||||| |
|
|
| T |
22831948 |
gtttgaaa |
22831941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 22810694 - 22810578
Alignment:
| Q |
23 |
ttgagtcaaaaccaatatacatatttttatccttctaccacgtattcattcatcattttgtttgcagcataatcaataataaccggtcaagttcacacat |
122 |
Q |
| |
|
||||||||||||||| ||| || |||| ||||||| |||||||||||||| |||||||| ||||||||| |||||||| |||| | | |||| |||| || |
|
|
| T |
22810694 |
ttgagtcaaaaccaacatatatctttt-atccttcaaccacgtattcattaatcattttatttgcagcaaaatcaatagtaactgctaaagtgcacatat |
22810596 |
T |
|
| Q |
123 |
tcaagtgtgaaattaaaa |
140 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
22810595 |
tcaagtgtgaacttaaaa |
22810578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 492 - 567
Target Start/End: Complemental strand, 22815718 - 22815645
Alignment:
| Q |
492 |
catgtgatgtttcttttagtaataaagtaattcatagctagattccaggacatttcttagtacgtaggacccaaat |
567 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
22815718 |
catgtgatgtttcttttagtaataa--taattcctagctaagttccaggacatttcttagtacctaggacccaaat |
22815645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 22843131 - 22843074
Alignment:
| Q |
83 |
tttgcagcataatcaataataaccggtcaagttcacacattcaagtgtgaaattaaaa |
140 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
22843131 |
tttgcagcataatcaatagtaactggtcaagtccacacattcaagtgtgaaattaaaa |
22843074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 600 - 735
Target Start/End: Complemental strand, 22873723 - 22873589
Alignment:
| Q |
600 |
tataaataataaacaccgaacagcacaacagaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgttac |
699 |
Q |
| |
|
|||||||||||||||| ||| || || || |||||| ||| |||||||| | ||||| |||||| ||| |||||| | ||||| |||| ||||||||| |
|
|
| T |
22873723 |
tataaataataaacactgaatagaactgcataagcattatt-attcacaatccataatcatgttcctcaggcttgtgctcatgttgttttatcttgttac |
22873625 |
T |
|
| Q |
700 |
attggtaataagtgaagacaacagtttcatatataa |
735 |
Q |
| |
|
||| ||| ||||||||||||||||||||| ||||| |
|
|
| T |
22873624 |
attagtagcaagtgaagacaacagtttcatctataa |
22873589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 22874070 - 22874007
Alignment:
| Q |
77 |
attttgtttgcagcataatcaataataaccggtcaagttcacacattcaagtgtgaaattaaaa |
140 |
Q |
| |
|
||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
22874070 |
attttatttacagcataatcaatagtaaccggtcaagtccacacattcaagtgtgaaactaaaa |
22874007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 22886538 - 22886453
Alignment:
| Q |
16 |
tatgaaattgagtcaaaaccaatatacatatttttatccttctaccacgtattcattcatcattttgtttgcagcataatcaataat |
102 |
Q |
| |
|
||||||||||||||||| |||| ||| || |||||||| ||| ||||| |||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
22886538 |
tatgaaattgagtcaaa-ccaacatatatctttttatctttccaccacatattcattcatcatttgatttgaagcataatcaataat |
22886453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 22843211 - 22843134
Alignment:
| Q |
46 |
tttttatccttctaccacgtattcattcatcattttgtttgcagcataatcaataataaccggtcaagttcacacatt |
123 |
Q |
| |
|
|||||||| ||| || |||||||||||||||||||| ||||||||||||||||| ||||||| ||| | |||||||| |
|
|
| T |
22843211 |
tttttatctttccacaacgtattcattcatcattttatttgcagcataatcaatggtaaccggccaattccacacatt |
22843134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 684
Target Start/End: Complemental strand, 22886057 - 22885989
Alignment:
| Q |
616 |
cgaacagcacaacagaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgtt |
684 |
Q |
| |
|
||||||| || |||||||||| |||||||| ||||||||||| |||||| ||| ||||||||| ||||| |
|
|
| T |
22886057 |
cgaacagaactacagaagcatgattcattctcaaactataatcatgttcctcagacttgtgttcatgtt |
22885989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 736 - 768
Target Start/End: Complemental strand, 22885969 - 22885937
Alignment:
| Q |
736 |
tggattccaatcatcacatttatatcttgatgg |
768 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
22885969 |
tggattccaatcatcacatttatatcttgatgg |
22885937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 22894924 - 22894875
Alignment:
| Q |
91 |
ataatcaataataaccggtcaagttcacacattcaagtgtgaaattaaaa |
140 |
Q |
| |
|
|||||||||| ||| ||||||| | |||||||||||||||||| |||||| |
|
|
| T |
22894924 |
ataatcaatagtaatcggtcaaatccacacattcaagtgtgaacttaaaa |
22894875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 235; Significance: 1e-129; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 146 - 493
Target Start/End: Complemental strand, 34025666 - 34025316
Alignment:
| Q |
146 |
ttagggggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaa |
237 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
34025666 |
ttagggggcgtttgtttcacggatacaaaaattattctctagaataacattcccaggaatatattccttggaattatattcctaggaatattttaaaaaa |
34025567 |
T |
|
| Q |
238 |
gtgtttggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaat |
337 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
34025566 |
gtgtttggttatcaatttgaattccttggaactttctttctaaattcttggtaatactaaaaatatgttt-----aaaatgtataatcccaggaataaat |
34025472 |
T |
|
| Q |
338 |
ttcaaaattattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaag |
437 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34025471 |
gtcaaaattattaaaatacccttttacattcaatagatgaaaaataatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaag |
34025372 |
T |
|
| Q |
438 |
gtattggtcaggatatatacttgttttttaatatataacaagagtaccctgtttca |
493 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
34025371 |
gtattggtcagagtatatacttgttttttaatacataacaagagtactctgtttca |
34025316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 598 - 972
Target Start/End: Original strand, 21150134 - 21150508
Alignment:
| Q |
598 |
cttataaataataaacaccgaacagcacaacagaagcatcattcattcacaaactataatgatgttcatcaaacttgtgtttatgttattttttcttgtt |
697 |
Q |
| |
|
||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||| ||| ||||||| |
|
|
| T |
21150134 |
cttataaataataaacatcaaacagaactacagaagcattgttcattcacaaactataatcatgttcctcaagcttgtgtttatgttgtttaatcttgtt |
21150233 |
T |
|
| Q |
698 |
acattggtaataagtgaagacaacagtttcatatataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttac |
797 |
Q |
| |
|
||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21150234 |
acattggtagcaagtgaagataacagtttcatctataatggattccaatcatcacatttatatcttgatggtattgctgagttaacctcaaatggcttac |
21150333 |
T |
|
| Q |
798 |
taagactcaccaatgaaatagaaagagccaaaggacatgctttctatccaaatccaatagttttcaaaaacacttctagtgaaagtgtgtcttctttctc |
897 |
Q |
| |
|
|||||||||| | ||| | ||| | | ||| |||||||||||||||||||| ||||||||| |||||||||| | |||||||||| |||||| || |
|
|
| T |
21150334 |
taagactcactagtgatacagatcatgaaatagggcatgctttctatccaaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttc |
21150433 |
T |
|
| Q |
898 |
aactacttttgtatttgccataatacctcaatatccaactcttggtggccatggaattgtttttgttatttctcc |
972 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21150434 |
aactacttttgtatttgccataagacctcaatatccaactcttggtggccatggaattgtttttgttatttctcc |
21150508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 152 - 492
Target Start/End: Complemental strand, 34918018 - 34917671
Alignment:
| Q |
152 |
ggcgtttgtttcacggatgcaaaaattattctctggaataactttct--------tattcctgggaattatattcctaggaatattttaaaaaagtgttt |
243 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
34918018 |
ggcgtttgtttcacggatgcaaaaattattccttggaataacttttccaggaatatattcattggaattatattcataggaatattttaaaaaagtgttt |
34917919 |
T |
|
| Q |
244 |
ggttaccaatttgaattccttggaactttctttctaaattcctaagaatactaaaaatatgtttggtttaaaatgtataattccaggaataaatttcaaa |
343 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||| ||||||| ||||| |
|
|
| T |
34917918 |
ggttaccaatttgaattccttggaactttctttctaaattcctgggaatattaaaa-tatgtttggtttaaaatgtataatcccagaaataaatgtcaaa |
34917820 |
T |
|
| Q |
344 |
attattaaaatacccttttacatttaatagatgaaaaacaatatttttcatgttatttttaatcaagcaaagtaaattatgtgagtcaacaaaggtattg |
443 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34917819 |
attattaaaatacctttttacattcaatagatgaaaaataatattttttatgttattttcaatcaagcaaagtaaattatgtgagtcaacaaaggtattg |
34917720 |
T |
|
| Q |
444 |
gtcaggatatatacttgttttttaatatataacaagagtaccctgtttc |
492 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34917719 |
atcatgatatatacttgttttttaatacataacaagagtaccctgtttc |
34917671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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