View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4362_low_1 (Length: 524)
Name: NF4362_low_1
Description: NF4362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4362_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 460; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 18 - 514
Target Start/End: Original strand, 32227198 - 32227693
Alignment:
| Q |
18 |
attatgaggtgaacaaaagttgctttgatgtagcttatcctgcaatgaatgatacaagcatgtcatttatatatgacacaaccatctcaaatgattcacc |
117 |
Q |
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| T |
32227198 |
attatgaggtgaacaaaagttgctttgatgtagcttatcctgcaatgaatgatacaagcatgtcatttatatatgacacaaccatctcaaatgattcacc |
32227297 |
T |
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| Q |
118 |
acttgattttttgggtggatcaatgacaaactactcaagaattggatcagttgaaacatttggctctgttgagaatctgtcacttgatgacttctattga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32227298 |
acttgattttttgggtggatcaatgacaaactactcaagaattggatcagttgaaacatttggctctgttgagaatctgtcacttgatgacttctattga |
32227397 |
T |
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| Q |
218 |
ggtcatttctacatatgaagggcactaacatggttactaggaaggtgggttcctccattttggtactgagaaagatgaaagtgtgnnnnnnngttctttt |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
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| T |
32227398 |
ggtcatttctacatatgaagggcactaacatggttactaggaaggtgggttcctccattttggtactaagaaagatgaaagtgtgtttttttgttctttt |
32227497 |
T |
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| Q |
318 |
tgtggttgtcatgacaatgggaggaattgtgtagaataaaagagtagtcagtggacatgtttttgtgttcctctctcttgaactaaggttgggactgctc |
417 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
32227498 |
tgtggttgtcatgacaatgggaggaattgtgtagaataaaagagtagtcagtggacatgtttttgtgttcctctctcttgaac-aaggttgggactgctc |
32227596 |
T |
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| Q |
418 |
tacgatgtattgtttataatttttggtggataacatctacataaattatcttgaatgtttcagtatagatcgtttgatgttaaagttcatttctctg |
514 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
32227597 |
tacgatgtattgtttataatttttggtggataacatctacataaattatcttgaatgttccagtatagatcgtttgatgttaaagttcatttctctg |
32227693 |
T |
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