View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4364-Insertion-20 (Length: 177)
Name: NF4364-Insertion-20
Description: NF4364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4364-Insertion-20 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 8 - 177
Target Start/End: Complemental strand, 41467277 - 41467109
Alignment:
| Q |
8 |
ataacacatcatataccattgacgaattcaacaaaagtgtaaacaacacagacacacaggggagacccttaggccaagctacacataaatatatgattaa |
107 |
Q |
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| T |
41467277 |
ataacacatcatataccattgacgaattcaacaaaagtgtaaacaacacagacccacaggggagaccctcaggccaagccacacataaatatatgattaa |
41467178 |
T |
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| Q |
108 |
agtaattaacaaacagatgagactctattttnnnnnnnntgtcaaatagataaaatacacaaaaacttca |
177 |
Q |
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| T |
41467177 |
agtaattaacaaacagacgagactctatttt-aaaaaaatgtcaaatagataaaatacacaaaaacttca |
41467109 |
T |
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Target: chr1 (Bit Score: 28; Significance: 0.0000009; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 11346090 - 11346055
Alignment:
| Q |
8 |
ataacacatcatataccattgacgaattcaacaaaa |
43 |
Q |
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| T |
11346090 |
ataacacatcatataccattcaggaattcaacaaaa |
11346055 |
T |
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