View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4365-Insertion-10 (Length: 493)
Name: NF4365-Insertion-10
Description: NF4365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4365-Insertion-10 |
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Alignment Details
Target: chr3 (Bit Score: 458; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 7 - 492
Target Start/End: Original strand, 24790552 - 24791037
Alignment:
| Q |
7 |
agaaagagcaacaacaccttcaagcttctctttcaaatccttcacttctaaatccttaaccttcacttcattcttcaactcctccaccaccgcttcatac |
106 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24790552 |
agaaagagcaacaacaccttcaagtttctctttcaaatccttcacttctaaatccttaaccttcacttcattcttcaactcctccaccaccgcttcatac |
24790651 |
T |
|
| Q |
107 |
ggcgccacaacctccctcaccgacgccacaccaaaacctcttctccgaccacctttcctgccaccaccattcctccgaaacctctctctcaacacagcca |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24790652 |
ggcgccacaacctccctcaccgacgccacaccaaaacctcttctccgaccacctttcctgccaccaccattcctccgaaacctctctctcaacacagcca |
24790751 |
T |
|
| Q |
207 |
acttcctcagctccgtaaccaccgccacatcagcaaccctcatcttctctgcatcccaaggtgaatgcgcttcttgtaacttcacataagctctcttcat |
306 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
24790752 |
gcttcctcagctccgtcaccaccgccacgtcagcaaccctcatcttctctgcatcccaaggtgaatgcgcttcttgtaacttcacatacgctctcttcat |
24790851 |
T |
|
| Q |
307 |
agacgacaccgtttcgaagatttcttccattaatgcttccatttgcttcaccttcaaaatcttcatacccatcattttgtcttcgttgaattcgtcattt |
406 |
Q |
| |
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||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24790852 |
agaagacaccgtttcgaagatttcttccattaatgcttccatttgcttaaccttcaaaatcttcatacccatcattttgtcttcgttgaattcgtcattt |
24790951 |
T |
|
| Q |
407 |
tcctccaaagggtcaccattttcatcctcatcttcgtcgtcatcatcaacatcatcactgtgataatgttcttgttcttcgtctct |
492 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24790952 |
tcctccaaagggtcaccattttcatcctcatcttcgtcgtcatcatcaacatcatcactgtgataatgttcttgttcttcgtctct |
24791037 |
T |
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