View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4365-Insertion-15 (Length: 182)
Name: NF4365-Insertion-15
Description: NF4365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4365-Insertion-15 |
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| [»] chr7 (4 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 26619946 - 26620121
Alignment:
| Q |
7 |
aattactatagtaggttgtatgtatctactatataaaagaatcaagaatcatcgtcagtatattttggtactcgtggactaagtgcagcattggtgcaac |
106 |
Q |
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| T |
26619946 |
aattactataggaggttgtatgtatctactatataaaagaatcaagaatcatcgtcagtatattttggtactcgtggactaagtgcagcattggtgcaac |
26620045 |
T |
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| Q |
107 |
caatggtactcctggactagatgcttgtagtagaattttagagatattttgctgccattttagggttttttgctta |
182 |
Q |
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| T |
26620046 |
caatggtactcctggactagatgcttgtagtagaattttagagatattttgctgccattttagggttttttgctta |
26620121 |
T |
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Target: chr7; HSP #2
Raw Score: 70; E-Value: 8e-32
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 26618074 - 26618159
Alignment:
| Q |
98 |
tggtgcaaccaat-ggtactcctggactagatgcttgtagtagaattttagagatattttgctgccattttagggttttttgctta |
182 |
Q |
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| T |
26618074 |
tggtgcagccaattggtactcctggactagatgcttgtagtagaattttaaagatattttgctgccattttagggttttttgctta |
26618159 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 26607499 - 26607583
Alignment:
| Q |
98 |
tggtgcaaccaatggtactcctggactagatgcttgtagtagaattttagagatattttgctgccattttagggttttttgctta |
182 |
Q |
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| T |
26607499 |
tggtgcaaccaatggtactccaggacaagatgctttcagtagaattttaaagatatttttctgccacttagggtttttttgctta |
26607583 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 26622375 - 26622423
Alignment:
| Q |
7 |
aattactatagtaggttgtatgtatctactatataaaagaatcaagaatc |
56 |
Q |
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| T |
26622375 |
aattactatagtaggttgcatgtatctactatat-gaagaatcaagaatc |
26622423 |
T |
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