View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4365-Insertion-5 (Length: 921)
Name: NF4365-Insertion-5
Description: NF4365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4365-Insertion-5 |
 | |
|
| [»] chr7 (21 HSPs) |
| |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 907; Significance: 0; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 907; E-Value: 0
Query Start/End: Original strand, 8 - 921
Target Start/End: Original strand, 4712717 - 4713631
Alignment:
| Q |
8 |
gattcggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaa |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4712717 |
gattcggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaa |
4712816 |
T |
|
| Q |
108 |
tgaaatcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatg |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4712817 |
tgaaatcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatg |
4712916 |
T |
|
| Q |
208 |
gaacatggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4712917 |
gaacatggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgc |
4713016 |
T |
|
| Q |
308 |
attatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgattt |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4713017 |
attatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgattt |
4713116 |
T |
|
| Q |
408 |
cggtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacga |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4713117 |
cggtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacga |
4713216 |
T |
|
| Q |
508 |
aacaagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataaggaaa |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4713217 |
aacaagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataaggaaa |
4713316 |
T |
|
| Q |
608 |
aagtgaacatggttgctttgttcaaaaaatgttacaatgaaggtgtgatagttgaagagatggtggacccgttcataaaggactctataacaagtgagtg |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4713317 |
aagtgaacatggttgctttgttcaaaaaatgttacaatgaaggtgtgatagttgaagagatggtggacccgttcataaaggactctataacaagtgagtg |
4713416 |
T |
|
| Q |
708 |
tttgaaatgttattgtgaaatggtgttgagttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagcttgcgttg |
807 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4713417 |
tttgaaatgttattgtgaaatggtgttgagttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagcttgcgttg |
4713516 |
T |
|
| Q |
808 |
aaattggttatgagtggggaggatggtaagtttgatgcgacgcaaaaaggaggaagtaaagc-ataggttgaatattcatttggtgacaacttttatgac |
906 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4713517 |
aaattggttatgagtggggaggatggtaagtttgatgcgacgcaaaaaggaggaagtaaagcaataggttgaatattcatttggtgacaacttttatgac |
4713616 |
T |
|
| Q |
907 |
aactttctctctcaa |
921 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4713617 |
aactttctctctcaa |
4713631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 10 - 837
Target Start/End: Original strand, 4784488 - 4785315
Alignment:
| Q |
10 |
ttcggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatg |
109 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||| | | ||| |||||||||||||||| |||| ||||||| ||||||| | || || ||| |||||| |
|
|
| T |
4784488 |
ttcggcaatgtgtacaaaggttatattgatggagttacaccagttgcgataaaacgtcttaaaccaggttctcaacaaggtgtgaacgagttcttgaatg |
4784587 |
T |
|
| Q |
110 |
aaatcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatgga |
209 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| || |||||||||||| ||||||||||| ||| | |
|
|
| T |
4784588 |
agattgagttgctctctcagcttcgtcatattcacttggtttcacttattggatattgcaatgaaggtgtagagatgattctcgtttatgacttcatgca |
4784687 |
T |
|
| Q |
210 |
acatggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcat |
309 |
Q |
| |
|
|| ||||| ||| ||||| |||| ||||| || |||||| ||||||||| ||||| || || ||| | ||||||||| |||| || |||| |||||| |
|
|
| T |
4784688 |
acgtggcagtctatgtgaatatctttatggatcagataacaaacctcttacctggaagcagaggcttgagattctattaggtgccgcgcgggggttgcat |
4784787 |
T |
|
| Q |
310 |
tatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcg |
409 |
Q |
| |
|
||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4784788 |
tatctgcatgcaggtgcgaagcacaatatcatacaccgtgacgtgaagagtacaaacatattgttggatgaaaaatgggtggctaaggtttctgattttg |
4784887 |
T |
|
| Q |
410 |
gtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaa |
509 |
Q |
| |
|
| ||||||||||||||||| |||||||| || ||||| |||||||||||||||||||| |||||| | || |||||||||||||| | |||| | ||| | |
|
|
| T |
4784888 |
ggttatcaaaagtgggacctacagggatgtcgatgacccatgtcagcactatggtgaaaggtagtctcgggtatttggatccagaatactacatgcgaca |
4784987 |
T |
|
| Q |
510 |
caagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataaggaaaaa |
609 |
Q |
| |
|
| ||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || |||| || ||||||||||||| ||||| |
|
|
| T |
4784988 |
aaggttgactctaaagtctgatgtgtactctttcggtgttgtgcttcttgaggtgttgtgtgcgagacccccgttggttcgttctttggataagaaaaaa |
4785087 |
T |
|
| Q |
610 |
gtgaacatggttgctttgttcaaaaaatgttacaatgaaggtgtgatagttgaagagatggtggacccgttcataaaggactctataacaagtgagtgtt |
709 |
Q |
| |
|
| | ||| || || ||| ||| |||||||||||||||| || || ||||||| ||||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
4785088 |
gcaagtttggctgtttggtttcaaacatgttacaatgaaggtatggtaattgaagatatggtggacccgttcattaaagattctataacaagtgagtgtt |
4785187 |
T |
|
| Q |
710 |
tgaaatgttattgtgaaatggtgttgagttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagcttgcgttgaa |
809 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| |||| ||| | |
|
|
| T |
4785188 |
tgaaatgttattgtcaaatggtgttaaattgtttgcatgatgatggaaatcaacgaatgtcgatgagtgatgtggttgcgacattagagtttgcattgca |
4785287 |
T |
|
| Q |
810 |
attggttatgagtggggaggatggtaag |
837 |
Q |
| |
|
|| | ||||||| ||||||| ||||| |
|
|
| T |
4785288 |
gttagagatgagtgaggaggatagtaag |
4785315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 10 - 505
Target Start/End: Original strand, 4846674 - 4847169
Alignment:
| Q |
10 |
ttcggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatg |
109 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
4846674 |
ttcggcaacgtgtacaaaggttacatcaatggactcacacctgttgcgataaaacgtcgtaaaccgggttctcgataaggtctaaatgaattcatgaatg |
4846773 |
T |
|
| Q |
110 |
aaatcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatgga |
209 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| | |
|
|
| T |
4846774 |
aaatcgagatgctctctcagcttcgtcatattcacttggtttccctcattggatattgcaacgaagatgcagagatgattctagtttatgacttcatgca |
4846873 |
T |
|
| Q |
210 |
acatggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcat |
309 |
Q |
| |
|
|| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||| || |
|
|
| T |
4846874 |
acgtggtactctcagtgaacatctctatggttcggataatgaacctcttaggtggaatcaaagactcgagattctattaggtgcagcaagggggttgaat |
4846973 |
T |
|
| Q |
310 |
tatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcg |
409 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4846974 |
tatcttcatgaaggtgcgaagcacaatatcatacatcgtgacgttaagagtacaaacatattgttggatgaaaaatgggtggctaaggtttctgatttcg |
4847073 |
T |
|
| Q |
410 |
gtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctac |
505 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
4847074 |
ggttatcaaaagtgggaccaaccgggatatcaatgactcatgtaagcactatggtgaagggtagtataggatatttggatccagaatgttacctac |
4847169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 10 - 803
Target Start/End: Complemental strand, 4863352 - 4862559
Alignment:
| Q |
10 |
ttcggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatg |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||| ||||||| |||||||||| |
|
|
| T |
4863352 |
ttcggcaacgtgtacaaaggttatattgatggagacatacctgttgcgataaaacgtcttaaaccaggttctcaacaaggtataaatgagttcatgaatg |
4863253 |
T |
|
| Q |
110 |
aaatcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatgga |
209 |
Q |
| |
|
| ||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| || ||||||||||| ||||||||||| ||| | |
|
|
| T |
4863252 |
agatcgaattactctctcagcttcgtcatattcacttggtttctctcattggatattgcaacgaaggtgaggagatgattctcgtttatgacttcatgca |
4863153 |
T |
|
| Q |
210 |
acatggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcat |
309 |
Q |
| |
|
|| |||||||||||||||| |||| |||||||||||||| |||||||||| ||||| | |||||| | ||||| || | ||||||||||| || ||| |
|
|
| T |
4863152 |
acgtggcactctccgtgaatatctttatggttcggataatgaacctcttacttggaagaagagacttgagattctgttgggggcagcaagggggttacat |
4863053 |
T |
|
| Q |
310 |
tatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcg |
409 |
Q |
| |
|
|||||||||| |||| ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4863052 |
tatcttcatgctggtgtaaagcacaatatcatacaccgtgacgtgaagagtaccaacatattgttggatgaaaaatgggtggctaaggtgtctgatttcg |
4862953 |
T |
|
| Q |
410 |
gtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaa |
509 |
Q |
| |
|
| ||||||||||||||||||||||| || || || ||||| |||||||| |||||||||||||| | |||||||| |||||||| | |||||| || | |
|
|
| T |
4862952 |
ggttatcaaaagtgggaccaacaggaatgtctatcactcacgtcagcaccgtggtgaagggtagtcttggatatttagatccagaatactaccttcgtca |
4862853 |
T |
|
| Q |
510 |
caagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataaggaaaaa |
609 |
Q |
| |
|
| ||||||||| || || |||||||| || ||||| ||||| ||||||||||||||||||||||||||||| |||| || ||||| || ||| ||||| |
|
|
| T |
4862852 |
aaggttgactctaaaatccgacgtgtattctttcggtgttgtccttcttgaggtgttgtgtgcgagaccaccattggttcgttcttctgaaaagaaaaaa |
4862753 |
T |
|
| Q |
610 |
gtgaacatggttgctttgttcaaaaaatgttacaatgaaggtgtgatagttgaagagatggtggacccgttcataaaggactctataacaagtgagtgtt |
709 |
Q |
| |
|
| || | || | || ||| |||||||||||||||||||||| ||| ||||||||||||| || ||||||||||| || ||||||||||||||||||| |
|
|
| T |
4862752 |
gcgagtttagtcgtttggtttcaaaaatgttacaatgaaggtgtcataattgaagagatggtagatccgttcataaaagattctataacaagtgagtgtt |
4862653 |
T |
|
| Q |
710 |
tgaaatgttattgtgaaatggtgttgagttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagcttgc |
803 |
Q |
| |
|
|||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||| |||| |
|
|
| T |
4862652 |
tgaaatgttattgtcaaatggttttaagttgtttgcatgacgatggaaatcaacgaatgtcaatgagtgatgttgttggagctttagagtttgc |
4862559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 10 - 837
Target Start/End: Original strand, 4816917 - 4817744
Alignment:
| Q |
10 |
ttcggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatg |
109 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||| | | ||| |||||||||||||||| |||| ||||||| ||||||| | || || ||| |||||| |
|
|
| T |
4816917 |
ttcggcaatgtgtacaaaggttatattgatggagttacaccagttgcgataaaacgtcttaaacctggttctcaacaaggtgttaacgagttcttgaatg |
4817016 |
T |
|
| Q |
110 |
aaatcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatgga |
209 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| || |||||||||||| ||||||||||| ||| | |
|
|
| T |
4817017 |
agattgagttgctctctcagcttcgtcatattcacttggtttcacttattggatattgcaatgaaggtgtagagatgattctcgtttatgacttcatgca |
4817116 |
T |
|
| Q |
210 |
acatggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcat |
309 |
Q |
| |
|
|| ||||| ||| ||||| |||| ||||| || |||||| ||||||||| ||||| || || ||| | ||||||||| |||| || |||| |||||| |
|
|
| T |
4817117 |
acgtggcagtctatgtgaatatctttatggatcagataacaaacctcttacctggaagcagaggcttgagattctattaggtgccgcgcgggggttgcat |
4817216 |
T |
|
| Q |
310 |
tatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcg |
409 |
Q |
| |
|
||| | |||| |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4817217 |
tatttgcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtacaaacatattgttggatgaaaaatgggtggctaaggtttctgattttg |
4817316 |
T |
|
| Q |
410 |
gtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaa |
509 |
Q |
| |
|
| ||||||||||||||||| |||||||| || ||||| |||||||||||||||||||| |||||| | || |||||||||||||| | |||| | ||| | |
|
|
| T |
4817317 |
ggttatcaaaagtgggacctacagggatgtcgatgacccatgtcagcactatggtgaaaggtagtctcgggtatttggatccagaatactacatgcgaca |
4817416 |
T |
|
| Q |
510 |
caagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataaggaaaaa |
609 |
Q |
| |
|
| |||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || |||| || |||||||||||| ||||| |
|
|
| T |
4817417 |
aagattgactctaaagtctgatgtgtactctttcggtgttgtgcttcttgaggtgttgtgtgcgagacccccgttggttcggtctttggataagaaaaaa |
4817516 |
T |
|
| Q |
610 |
gtgaacatggttgctttgttcaaaaaatgttacaatgaaggtgtgatagttgaagagatggtggacccgttcataaaggactctataacaagtgagtgtt |
709 |
Q |
| |
|
| | ||| || || ||| ||| |||||||||||||||| || || ||||||| ||||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
4817517 |
gcaagtttggctgtttggtttcaaacatgttacaatgaaggtatggtaattgaagatatggtggacccgttcattaaagattctataacaagtgagtgtt |
4817616 |
T |
|
| Q |
710 |
tgaaatgttattgtgaaatggtgttgagttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagcttgcgttgaa |
809 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| |||| ||| | |
|
|
| T |
4817617 |
tgaaatgttattgtcaaatggtgttaaattgtttgcatgatgatggaaatcaacgaatgtcgatgagtgatgtggttgcgacattagagtttgcattgca |
4817716 |
T |
|
| Q |
810 |
attggttatgagtggggaggatggtaag |
837 |
Q |
| |
|
|| | ||||||| ||||||| ||||| |
|
|
| T |
4817717 |
gttagagatgagtgaggaggatagtaag |
4817744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 16 - 841
Target Start/End: Original strand, 4697849 - 4698674
Alignment:
| Q |
16 |
aacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatgaaatcg |
115 |
Q |
| |
|
||||||| |||||||||||| |||| | | |||||| || ||||||||| ||| |||||||| ||||||| |||| || |||||||||||||||| |
|
|
| T |
4697849 |
aacgtgttcaaaggttacatcgatgaaggtacacctgtagcaataaaacgtttgaaaccgggttctcaacaaggtgtaaacgagttcatgaatgaaatcg |
4697948 |
T |
|
| Q |
116 |
agttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatggaacatgg |
215 |
Q |
| |
|
||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||| |||| ||||||||||||||| ||||| ||||| ||||||| ||| |
|
|
| T |
4697949 |
agttgctctctcaacttcgtcacattcacttggtttctctcattggatattgcaacgaaggtgcagagatgattctcgtttacgacttcatggaacgtgg |
4698048 |
T |
|
| Q |
216 |
cactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcattatctt |
315 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||| ||||| | ||||| | |||||||| | |||||||| || | ||||||||| |
|
|
| T |
4698049 |
cactcttcgtgaatatctctatggttcggataacgaacctcttacttggaagaagagactcgagattctattgggggcagcaagaggcctacattatctt |
4698148 |
T |
|
| Q |
316 |
catgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcggtttat |
415 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| || |||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
4698149 |
catgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagtaccaacatattgttagatgataaatgggtggctaaggtttctgatttcgggttat |
4698248 |
T |
|
| Q |
416 |
caaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaacaagtt |
515 |
Q |
| |
|
||||||||||||||||||| || || ||||| || |||||||||| ||||||||||||| | || ||||| ||||| || | |||||| || | | ||| |
|
|
| T |
4698249 |
caaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaaggtgaagggtagtctcgggtatttagatcccgaatactaccttcgtcaaaggtt |
4698348 |
T |
|
| Q |
516 |
gactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataaggaaaaagtgaac |
615 |
Q |
| |
|
||| || ||||| ||||||||||| || || ||||||||||||||||| |||||||||||||||||||||| || ||||||||| ||| |||||| || |
|
|
| T |
4698349 |
gaccctaaagtccgacgtgtactcttttggtgttgtgcttcttgaggtattgtgtgcgagaccacctttggttcgttctttggaaaagaaaaaagcgagt |
4698448 |
T |
|
| Q |
616 |
atggttgctttgttcaaaaaatgttacaatgaaggtgtgatagttgaagagatggtggacccgttcataaaggactctataacaagtgagtgtttgaaat |
715 |
Q |
| |
|
| || || |||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| ||| ||| | ||| |
|
|
| T |
4698449 |
ttagtcttttggttccaaagatgttacaatgaaggtgtgatcatcgaagagatggtggacccgttcataaaggattctataacggctgaatgtctaaaaa |
4698548 |
T |
|
| Q |
716 |
gttattgtgaaatggtgttgagttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagcttgcgttgaaattggt |
815 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||| ||| | |||| |
|
|
| T |
4698549 |
gttattgccaaatggtgttgagttgtttgcatgatgatggaaatcaacggatgtcgatgagtgatgttgttggagctttagagtttgcattgcagttgga |
4698648 |
T |
|
| Q |
816 |
tatgagtggggaggatggtaagtttg |
841 |
Q |
| |
|
|| |||| ||||||| |||||||| |
|
|
| T |
4698649 |
gataagtgaggaggatactaagtttg |
4698674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 500 - 881
Target Start/End: Original strand, 4854579 - 4854962
Alignment:
| Q |
500 |
acctacgaaacaagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttgga |
599 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| |||||||| ||||| | ||| ||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4854579 |
acctacgaaacaggttgactctaaagtctgatgtgtactctttcggtgatgtacttcttgagatgttgtgtgcgagaccacctttggatcatttattgga |
4854678 |
T |
|
| Q |
600 |
taaggaaaaagtgaacatggttgctttgttcaaaaaatgttacaatgaaggtgtgatagttgaagagatggtggacccgttcataaaggactctataaca |
699 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4854679 |
taagaaaaaagtgaacatggttgctttgttcaaaaaatgttacaatgaaggagtgatagttgaagagatggtggacccattcataaaggactctataaca |
4854778 |
T |
|
| Q |
700 |
agtgagtgtttgaaatgttattgtgaaatggtgttgagttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagc |
799 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
4854779 |
agtgagtgtttgaaattttattgtcaaatggtgttgagttgtttgcatggtgatggaaatcaacggatgtctatgagtgatgtggttggaactttagagc |
4854878 |
T |
|
| Q |
800 |
ttgcgttgaaattggttatgagtggggaggatggtaagtttgatgcgacgca--aaaaggaggaagtaaagcataggttgaata |
881 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||||| || ||| ||||||| |||||||||||||||||| |
|
|
| T |
4854879 |
ttgcgttgaaattggttatgagtggggagaatagtaagtttgatgcgacccaagaaagggaggaattaaagcataggttgaata |
4854962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 8 - 603
Target Start/End: Complemental strand, 4652985 - 4652390
Alignment:
| Q |
8 |
gattcggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaa |
107 |
Q |
| |
|
|||| ||||||||||||||||||| ||| |||||| ||| ||||||||||||||||| | |||| || |||| ||||||| || || |||||||| |
|
|
| T |
4652985 |
gatttggcaacgtgtacaaaggttgcatcgatggatccatgcctgttgcgataaaacgcctcaaatctggctctcaacaaggtgccaacgagttcatgaa |
4652886 |
T |
|
| Q |
108 |
tgaaatcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatg |
207 |
Q |
| |
|
||| |||||||| ||||| |||||||| || |||||||| || |||||| | |||||||||||||| || |||| |||||| | |||||||| || ||| |
|
|
| T |
4652885 |
tgagatcgagttactctcccagcttcgccacattcacttggtatccctcgtgggatattgcaatgatgacacagaaatgattttggtttatgagttcatg |
4652786 |
T |
|
| Q |
208 |
gaacatggcactctccgtgaacatctctatggttcggataacgaacctcttag-gtggaatcaaagacttaatattctattatgtgcagcaaggggattg |
306 |
Q |
| |
|
|||| || ||||| |||| |||| |||||||| ||||| | || |||| |||||| | || ||| | |||||||| || | || || || || |
|
|
| T |
4652785 |
caacacggtactctgtgtgagtatctttatggttctaataaccagcc-cttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctg |
4652687 |
T |
|
| Q |
307 |
cattatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatt |
406 |
Q |
| |
|
|||||||||||| || | ||| || || || |||||||||||||| ||||| || || |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4652686 |
aattatcttcatgcagaggtgaaacacaagataatacaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgatt |
4652587 |
T |
|
| Q |
407 |
tcggtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacg |
506 |
Q |
| |
|
| || ||||| ||||||||||| ||| |||| || | || ||||| ||||| |||||||||||||| |||| |||||||||||||| | || | | |
|
|
| T |
4652586 |
ttggattatcgaaagtgggaccgacaaggatgtctacaacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgct |
4652487 |
T |
|
| Q |
507 |
aaacaagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataag |
603 |
Q |
| |
|
| | | | ||||| || ||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||||||| || | |||||||||| |
|
|
| T |
4652486 |
ccaaaggctaactctaaaatctgatgtgtactcattcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttggttcgtgatttggataag |
4652390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 16 - 603
Target Start/End: Complemental strand, 4630366 - 4629779
Alignment:
| Q |
16 |
aacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatgaaatcg |
115 |
Q |
| |
|
|||||||||||||||| | |||||| || |||||||||||||||||| | |||| || |||| ||||||| || || |||||||| ||||||| |
|
|
| T |
4630366 |
aacgtgtacaaaggttgtgtcgatggatccacacctgttgcgataaaacgcctcaaatcaggctctcaacaaggtgccaacgagttcatgaacgaaatcg |
4630267 |
T |
|
| Q |
116 |
agttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatggaacatgg |
215 |
Q |
| |
|
|||||||||| |||||||| || |||||||| || ||||| | |||||||||||||| | ||||||||||||| |||||||| || ||| | || || |
|
|
| T |
4630266 |
agttgctctcccagcttcgccacattcacttggtgtcccttgtaggatattgcaatgacaacacagagatgattctggtttatgagttcatgcagcacgg |
4630167 |
T |
|
| Q |
216 |
cactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcattatctt |
315 |
Q |
| |
|
|||||| | || |||| |||||||| |||| | || || ||||| || || ||| | || ||||| ||||||| || || || |||||||| |
|
|
| T |
4630166 |
tactctctgcgagtatctgtatggttccaataatcagcccctaccatggaagcagaggcttgagatcctattgggtgcagcgagagggctgaattatctt |
4630067 |
T |
|
| Q |
316 |
catgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcggtttat |
415 |
Q |
| |
|
||| | | |||||| || || ||||| |||||||| ||||| || || ||| |||||||||| |||||||| |||||||||||||||||||| |||| |
|
|
| T |
4630066 |
cattctgaggtgaagcacaagataatacatcgtgacgtaaagagcaccaacatactgttggatgagaaatgggtagctaaggtttctgatttcgggttat |
4629967 |
T |
|
| Q |
416 |
caaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaacaagtt |
515 |
Q |
| |
|
| || |||||||| ||||| ||| | | || ||||||||||| ||||||||||| || | |||||||||||||| || | ||| | | | | | | |
|
|
| T |
4629966 |
ccaaggtgggacctacaggaataacgactacccatgtcagcacgatggtgaaggggagccttggatatttggatcccgaatactatatgctccaaaggct |
4629867 |
T |
|
| Q |
516 |
gactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataag |
603 |
Q |
| |
|
||||| || |||||||||||||| || || || ||||||||||||||||||||||| ||||||||||||| || | |||||||||| |
|
|
| T |
4629866 |
aactctaaaatctgacgtgtactcgtttggtgtggtgcttcttgaggtgttgtgtgctagaccacctttggttcgtgatttggataag |
4629779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 13 - 603
Target Start/End: Complemental strand, 4666395 - 4665805
Alignment:
| Q |
13 |
ggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatgaaa |
112 |
Q |
| |
|
||||||||||||||||||| | |||||| || || |||||| |||||||| | |||| || |||| ||||||| || || |||||||| |||| |
|
|
| T |
4666395 |
ggcaacgtgtacaaaggttgtgtcgatggatccacacttgttgccataaaacgcctcaaatcaggctctcaacaaggtgccaacgagttcatgaacgaaa |
4666296 |
T |
|
| Q |
113 |
tcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatggaaca |
212 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||| || ||||| | |||||||||||||| || ||||||||||||| |||||||| || ||| | || |
|
|
| T |
4666295 |
tcgaattgctctctcagcttcgccacattcacttggtatcccttgtgggatattgcaatgacgacacagagatgattctggtttatgagttcatgcagca |
4666196 |
T |
|
| Q |
213 |
tggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcattat |
312 |
Q |
| |
|
|| ||||| | || |||| |||||||| ||||| | || || ||||| || || ||| | ||||| || ||||||| || || || ||||| |
|
|
| T |
4666195 |
cggtactctttgcgagtatctttatggttctaataaccagcccctatcatggaagcagaggcttgagattcttttgggtgcagcgagagggctgaattat |
4666096 |
T |
|
| Q |
313 |
cttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcggtt |
412 |
Q |
| |
|
|||||| | | ||| || || || |||||||||||||| ||||| || || ||||||||||||||||||||| |||| |||||||| || || || | |
|
|
| T |
4666095 |
cttcatactgaggtgaaacagaagataatacaccgtgacgtgaagagcaccaacatattgttggatgaaaaatggatggcaaaggtttccgactttgggt |
4665996 |
T |
|
| Q |
413 |
tatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaacaa |
512 |
Q |
| |
|
|||| || |||||||| ||||||||||||| || ||||||||||| ||||||||||| || | |||||||||||||| || | || | | | | |
|
|
| T |
4665995 |
tatccaaggtgggaccgacagggatatcaactacccatgtcagcacgatggtgaaggggagcctcggatatttggatcccgaatattatatgctccaaag |
4665896 |
T |
|
| Q |
513 |
gttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttggatcattctttggataag |
603 |
Q |
| |
|
| | ||||| || ||||| |||||||| ||||| || ||||||||||||||||||||||| ||||||||||||| || | |||||||||| |
|
|
| T |
4665895 |
gctaactctaaaatctgatgtgtactcgttcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttggttcgtgatttggataag |
4665805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 13 - 586
Target Start/End: Complemental strand, 4661264 - 4660688
Alignment:
| Q |
13 |
ggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatgaaa |
112 |
Q |
| |
|
||||||||||||||||||| |||||||| | || ||||||||| ||||| | |||| ||| |||| ||||||| | || || |||||||| |||| |
|
|
| T |
4661264 |
ggcaacgtgtacaaaggttgtgttgatggatcaacacttgttgcgattaaacgcctcaaatcgggctctcaacaaggtgtcaacgagttcatgaacgaaa |
4661165 |
T |
|
| Q |
113 |
tcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatggaaca |
212 |
Q |
| |
|
||||||||||||| |||||||| || ||||| || || |||||||| |||||||| ||||| | || |||||||||| |||||||| || ||| | | |
|
|
| T |
4661164 |
tcgagttgctctcccagcttcgccacattcatttggtgtccctcatgggatattgtaatgacaacacatagatgattctggtttatgaattcatgcagcg |
4661065 |
T |
|
| Q |
213 |
tggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcattat |
312 |
Q |
| |
|
|| |||||| | || ||||| |||||||| ||||| | || || |||| ||||| ||| | || ||||| || ||||||| || ||||||||| |
|
|
| T |
4661064 |
cggtactctctgcgagcatctttatggttctaataaccagcccctaccttggaggcaaaggcttgagatcctattgggttcagcaagagggttgcattat |
4660965 |
T |
|
| Q |
313 |
cttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcggtt |
412 |
Q |
| |
|
||||||| | | ||| || || || |||||||| ||||| ||||| || || |||||||||||| | |||||||| ||||||||||| || ||||| | |
|
|
| T |
4660964 |
cttcatgctgaggtgaaacacaaaataatacaccgcgacgtaaagagcaccaacatattgttggatcacaaatgggtagctaaggtttccgacttcgggt |
4660865 |
T |
|
| Q |
413 |
tatcaaaagtgggaccaacagggatatcaatgactcat---gtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaa |
509 |
Q |
| |
|
|||| || |||||||| ||||||||||| | |||||| |||||||| ||||||||||| || | || ||||||||||| | | ||| | | | |
|
|
| T |
4660864 |
tatccaaggtgggaccgacagggatatcgactactcatcacgtcagcacaatggtgaaggggagccttgggtatttggatccccaatactatatgctcca |
4660765 |
T |
|
| Q |
510 |
caagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttgg |
586 |
Q |
| |
|
| ||| ||||| || ||||| |||||||| ||||| || ||||||||||||||||||||||| || ||||| |||| |
|
|
| T |
4660764 |
aaggttaactctaaaatctgaagtgtactcgttcggtgtggtgcttcttgaggtgttgtgtgctaggccaccattgg |
4660688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 13 - 440
Target Start/End: Complemental strand, 4643164 - 4642737
Alignment:
| Q |
13 |
ggcaacgtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatgaaa |
112 |
Q |
| |
|
||||||||||||||||||| |||||||| || || ||||||| | || || | |||| ||| |||| ||||||| || || ||||||||||||| |
|
|
| T |
4643164 |
ggcaacgtgtacaaaggttgtgttgatggatccacacttgttgcggttaagcgcctcaaatcgggctctcaacaaggtgccaacgagttcatgaatgaaa |
4643065 |
T |
|
| Q |
113 |
tcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatggaaca |
212 |
Q |
| |
|
||||||||||||| |||||||| || |||||||| || |||||| | ||||||||||| || || ||||||||||| | |||||||| || ||| | || |
|
|
| T |
4643064 |
tcgagttgctctcccagcttcgccacattcacttggtgtccctcgtgggatattgcaacgatgacacagagatgattttggtttatgagttcatgcagca |
4642965 |
T |
|
| Q |
213 |
tggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcattat |
312 |
Q |
| |
|
|| ||||| |||| |||| |||||||| ||||||| || || |||| || || ||| | ||||||||| |||| ||||| || || ||||| |
|
|
| T |
4642964 |
cggtactctttgtgagtatctttatggttctaataacgagccactaccttggaggcagaggcttgaaattctattaggtgccgcaagagggctgaattat |
4642865 |
T |
|
| Q |
313 |
cttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcggtt |
412 |
Q |
| |
|
||||||| | | |||||| || || ||||| |||||||| ||||| || || ||||||||||||||||||||| | ||||||||||| || ||||| | |
|
|
| T |
4642864 |
cttcatgctgaggtgaagcacaaaataatacatcgtgacgtgaagagcaccaacatattgttggatgaaaaatggatagctaaggtttccgacttcgggt |
4642765 |
T |
|
| Q |
413 |
tatcaaaagtgggaccaacagggatatc |
440 |
Q |
| |
|
|||| || |||||||| ||||||||||| |
|
|
| T |
4642764 |
tatccaaggtgggacctacagggatatc |
4642737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 19 - 586
Target Start/End: Complemental strand, 4636311 - 4635744
Alignment:
| Q |
19 |
gtgtacaaaggttacattgatggactcatacctgttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatgaaatcgagt |
118 |
Q |
| |
|
||||||||||||| |||||||||| || ||| |||||||||||||| | | | ||| |||| ||||||| |||||| |||||||| || ||||||| |
|
|
| T |
4636311 |
gtgtacaaaggtttcattgatggatccacacccgttgcgataaaacgcctcaggtcgggctctcaacaaggtgcaaatgagttcatgaacgagatcgagt |
4636212 |
T |
|
| Q |
119 |
tgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatgactttatggaacatggcac |
218 |
Q |
| |
|
||||||| |||||||| || |||||||| || ||||| | ||||||||||| || | ||||||||||||| || ||||| || ||| | || || || |
|
|
| T |
4636211 |
tgctctcccagcttcgccacattcacttggtatcccttgtgggatattgcaacgacaagacagagatgattctggtctatgagttcatgcagcacggtac |
4636112 |
T |
|
| Q |
219 |
tctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaaggggattgcattatcttcat |
318 |
Q |
| |
|
|||| | || |||| |||||||| ||||| |||| || ||||| || || ||| | ||||| || ||||||| || || || ||||||||||| |
|
|
| T |
4636111 |
tctctgcgagtatctttatggttctaataaccaacccctaccatggaagcagaggcttgaaattcttttgggtgcagctagagggctgaattatcttcat |
4636012 |
T |
|
| Q |
319 |
gaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcggtttatcaa |
418 |
Q |
| |
|
| | || | || || ||||| |||||||| ||||| || || |||||||||||||| |||||| | ||||||||||||||||| || ||||||| |
|
|
| T |
4636011 |
actgaggttaaaaacaagataatacatcgtgacgtaaagagcaccaacatattgttggatgagaaatggatagctaaggtttctgattttgggttatcaa |
4635912 |
T |
|
| Q |
419 |
aagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaacaagttgac |
518 |
Q |
| |
|
| |||||||| ||||| ||||| | || || |||||||| || || ||||| || | || ||||| ||||| |||| ||| | | | | | || |
|
|
| T |
4635911 |
aggtgggaccgacaggtatatcgactacccacgtcagcacaattgttaagggaagcttggggtatttagatcctgagtactatatgttccaaaggcttac |
4635812 |
T |
|
| Q |
519 |
tcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttgg |
586 |
Q |
| |
|
|||||| || ||||||||||||||||| || ||||||||||||||||||||||| || |||||||||| |
|
|
| T |
4635811 |
tcttaaatcagacgtgtactcattcggtgtggtgcttcttgaggtgttgtgtgctaggccacctttgg |
4635744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 100 - 467
Target Start/End: Complemental strand, 4672013 - 4671646
Alignment:
| Q |
100 |
ttcatgaatgaaatcgagttgctctctcagcttcgtcatattcacttagtttccctcattggatattgcaatgaagatgcagagatgattcttgtttatg |
199 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||| || |||||||| || |||||| ||||||||||| | || || || |||||||| | ||||| | |
|
|
| T |
4672013 |
ttcatgaacgaaatcgagttactctctcaacttcgccacattcacttggtatccctcgttggatattgcgacgatgacacatagatgattttggtttacg |
4671914 |
T |
|
| Q |
200 |
actttatggaacatggcactctccgtgaacatctctatggttcggataacgaacctcttaggtggaatcaaagacttaatattctattatgtgcagcaag |
299 |
Q |
| |
|
| |||||| | || || ||||| | || |||| |||||||| ||||||| || || |||| || || ||| | |||||||| |||| || || |
|
|
| T |
4671913 |
agtttatgcagcacggtactctttgcgagtatctttatggttctaataacgagccactaccttggaggcagaggcttgagattctattgggtgctgcgag |
4671814 |
T |
|
| Q |
300 |
gggattgcattatcttcatgaaggtgcgaagcataatatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtt |
399 |
Q |
| |
|
|| | |||||||||||| | | |||||| || || ||||| |||||||| ||||| || || |||||||||||||| |||||| | ||||||||| |
|
|
| T |
4671813 |
agggctaaattatcttcatgctgaggtgaagcacaaaataatacatcgtgacgtgaagagcaccaacatattgttggatgagaaatggatagctaaggtt |
4671714 |
T |
|
| Q |
400 |
tctgatttcggtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtgaa |
467 |
Q |
| |
|
|| || ||||| ||||| || |||||||| || |||||| ||| || || |||||||| |||||||| |
|
|
| T |
4671713 |
tccgacttcgggttatccaaggtgggacccacggggataacaactacccacgtcagcacaatggtgaa |
4671646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 44495156 - 44495111
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
44495156 |
ttgaatatccatttgatgacaacttttatgacaactttctctctca |
44495111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 33180769 - 33180724
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
33180769 |
ttgaacattcattttgtgacaacttttatgacaattttctctctca |
33180724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 815
Target Start/End: Complemental strand, 4642441 - 4642362
Alignment:
| Q |
736 |
agttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagcttgcgttgaaattggt |
815 |
Q |
| |
|
||||||||||||| |||||||| ||||||| || |||||| | ||||||||| ||||||| |||||||| ||||||| |
|
|
| T |
4642441 |
agttgtttgcatgatgatggaattcaacgaccctcaatgagtcaagtggttgggggtttagagtttgcgttgcaattggt |
4642362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 701 - 815
Target Start/End: Complemental strand, 4671412 - 4671298
Alignment:
| Q |
701 |
gtgagtgtttgaaatgttattgtgaaatggtgttgagttgtttgcatggtgatggaaatcaacgaatgtctatgagtgatgtggttgggactttagagct |
800 |
Q |
| |
|
||||||||||| ||| |||||| | ||| ||||||||| ||||||| |||||||| ||||||| || |||||| | ||||||||| ||||||| | |
|
|
| T |
4671412 |
gtgagtgtttggaatattattgcaagttggcgttgagttgcttgcatgatgatggaactcaacgaccctcaatgagtcaagtggttgggggtttagagtt |
4671313 |
T |
|
| Q |
801 |
tgcgttgaaattggt |
815 |
Q |
| |
|
|| |||| ||||||| |
|
|
| T |
4671312 |
tgtgttgcaattggt |
4671298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 4671581 - 4671527
Alignment:
| Q |
532 |
gtgtactcattcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttgg |
586 |
Q |
| |
|
|||||||||||||| || || |||||||| ||||||||||| || |||||||||| |
|
|
| T |
4671581 |
gtgtactcattcggtgtggtacttcttgaagtgttgtgtgctaggccacctttgg |
4671527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 891 - 920
Target Start/End: Complemental strand, 32777750 - 32777721
Alignment:
| Q |
891 |
tgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
32777750 |
tgacaacttttatgacaactttctctctca |
32777721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 39823821 - 39823866
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| ||||||||||||| || ||||||||||||||| ||||||| |
|
|
| T |
39823821 |
ttgaacattcatttggtgataatttttatgacaactttttctctca |
39823866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 3e-32; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 367 - 586
Target Start/End: Original strand, 18926749 - 18926968
Alignment:
| Q |
367 |
atattgttggatgaaaaatgggtggctaaggtttctgatttcggtttatcaaaagtgggaccaacagggatatcaatgactcatgtcagcactatggtga |
466 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| || ||||| ||||| || ||||||||||| |||||||||| || ||||||||||| ||||||| |
|
|
| T |
18926749 |
atattattggatgagaaatgggtggctaaggtttccgacttcgggttatccaaggtgggaccaacggggatatcaactacccatgtcagcacaatggtga |
18926848 |
T |
|
| Q |
467 |
agggtagtataggatatttggatccagagtgctacctacgaaacaagttgactcttaagtctgacgtgtactcattcggagttgtgcttcttgaggtgtt |
566 |
Q |
| |
|
|||| ||| | || ||||| ||||| |||| ||| | | | | | | || || || |||||||||||||||||||| || |||||||||||||| || |
|
|
| T |
18926849 |
aggggagtcttgggtatttagatcctgagtactatatgctccaaaggcttaccctaaaatctgacgtgtactcattcggtgtggtgcttcttgaggtatt |
18926948 |
T |
|
| Q |
567 |
gtgtgcgagaccacctttgg |
586 |
Q |
| |
|
|||||| || |||||||||| |
|
|
| T |
18926949 |
gtgtgcaaggccacctttgg |
18926968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 17475334 - 17475379
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| ||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
17475334 |
ttgaacattcatttggtgataacttttttgacaactttctctctca |
17475379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 41082330 - 41082375
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| ||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
41082330 |
ttgaacatttatttggtgataacttttatgacaactttctctctca |
41082375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 421
Target Start/End: Original strand, 45191491 - 45191576
Alignment:
| Q |
336 |
tatcatacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcggtttatcaaaag |
421 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||| | |||||||| || | || || |||||||||||||| |||||||| |||| |
|
|
| T |
45191491 |
tatcatacaccgtgacgtgaagacaacaaatatactcttggatgagaattatgttgccaaggtttctgattttggtttatctaaag |
45191576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 4915732 - 4915687
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || ||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
4915732 |
ttgaacatccattttgtgacaatttttatgacaactttctctctca |
4915687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 33860659 - 33860704
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || ||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
33860659 |
ttgaacatccatttggtgacaatttttgtgacaactttctctctca |
33860704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 46406033 - 46405988
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
46406033 |
ttgaatattcatttggtgacaacttttgcaacaactttttctctca |
46405988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 41767 - 41812
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| |||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
41767 |
ttgaacattcatttggtgacaatttttgtgacaactttctctctca |
41812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.000000001; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 3198972 - 3199017
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| ||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
3198972 |
ttgaacattcatttggtgataatttttatgacaactttctctctca |
3199017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 5479305 - 5479396
Alignment:
| Q |
52 |
gttgcgataaaacgtcgtaaattgggttctcgacaaggtctaaatgaattcatgaatgaaatcgagttgctctctcagcttcgtcatattca |
143 |
Q |
| |
|
||||| |||||||| | |||| |||||| | ||||||| |||||| ||||| ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
5479305 |
gttgcaataaaacggcttaaaccgggttcacaacaaggtgaaaatgagttcatcaatgaaatcgacatgctctcgaagcttcgtcatattca |
5479396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 5327651 - 5327606
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || ||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
5327651 |
ttgaacatccatttagtgacaacttttataacaactttctctctca |
5327606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 37927264 - 37927219
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37927264 |
ttgaacatccatttggtgacaacttttgtgacaactttctctctca |
37927219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 884 - 920
Target Start/End: Complemental strand, 21195941 - 21195905
Alignment:
| Q |
884 |
catttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21195941 |
catttggtgacaacttttgtgacaactttctctctca |
21195905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 49167762 - 49167807
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || |||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
49167762 |
ttgaacatccatttgatgacaacttttgtgacaactttctctctca |
49167807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 54773813 - 54773768
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || ||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
54773813 |
ttgaacatccatttagtgacaacttttataacaactttctctctca |
54773768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 9194441 - 9194486
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9194441 |
ttgaacatccattttgtgacaacttttatgacaactttctctctca |
9194486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 30977901 - 30977946
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30977901 |
ttgaacatccattttgtgacaacttttatgacaactttctctctca |
30977946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 891 - 920
Target Start/End: Complemental strand, 23690553 - 23690524
Alignment:
| Q |
891 |
tgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
23690553 |
tgacaacttttatgacaactttctctctca |
23690524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 28679328 - 28679373
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28679328 |
ttgaacatccatttggtgacaacttttgcgacaactttctctctca |
28679373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000008; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 884 - 918
Target Start/End: Complemental strand, 29147923 - 29147889
Alignment:
| Q |
884 |
catttggtgacaacttttatgacaactttctctct |
918 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
29147923 |
catttggtgacaacttttgtgacaactttctctct |
29147889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 1790520 - 1790565
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1790520 |
ttgaacattcatttggtgacaacttttgcaacaactttctctctca |
1790565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 891 - 920
Target Start/End: Complemental strand, 40439883 - 40439854
Alignment:
| Q |
891 |
tgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
40439883 |
tgacaacttttatgacaactttctctctca |
40439854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 885 - 918
Target Start/End: Original strand, 50433791 - 50433824
Alignment:
| Q |
885 |
atttggtgacaacttttatgacaactttctctct |
918 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
50433791 |
atttggtcacaacttttatgacaactttctctct |
50433824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000003; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 3946252 - 3946297
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || ||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
3946252 |
ttgaacatccattttgtgacaacttttgtgacaactttctctctca |
3946297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 15795099 - 15795054
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||| ||||| ||||| |
|
|
| T |
15795099 |
ttgaatatttattttgtgacaacttttatgacaattttctttctca |
15795054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Complemental strand, 29440581 - 29440536
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| ||||||||||||| ||||||| |||||||||||| ||||| |
|
|
| T |
29440581 |
ttgaacattcatttggtgataacttttgtgacaactttctttctca |
29440536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 41600321 - 41600366
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| |||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
41600321 |
ttgaacattcatttattgacaacttttgtgacaactttctctctca |
41600366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 920
Target Start/End: Original strand, 8920090 - 8920135
Alignment:
| Q |
875 |
ttgaatattcatttggtgacaacttttatgacaactttctctctca |
920 |
Q |
| |
|
||||| || ||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
8920090 |
ttgaacatccattttgtgacaacttttgtgacaactttctctctca |
8920135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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