View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4365-Insertion-8 (Length: 574)
Name: NF4365-Insertion-8
Description: NF4365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4365-Insertion-8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 509; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 27 - 574
Target Start/End: Original strand, 31829585 - 31830133
Alignment:
| Q |
27 |
ttcttttcactttgtttatttatttattgaagcgccgacacaaacattggacaggatggtacattgatacataaacggtaatactttgaggaactgtaat |
126 |
Q |
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| T |
31829585 |
ttcttttcactttgtttatttatttattgaagcgccgacacaaacattggacaggatggtacattgatacgtaaacggtaatactttgaggaactgtaat |
31829684 |
T |
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| Q |
127 |
taactaaacgtagctacatgtgcctctattggacatcagaaacaccttcaatatgaagtgtcaggctaaattgatttagatatttaggcatcgctattct |
226 |
Q |
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| T |
31829685 |
taactaaacgtaactacatgtgcctctattggacatcagaaacaccttcaatatgaagtgtcaggctaaattgatttagatatttaggcatcgctattct |
31829784 |
T |
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| Q |
227 |
catgtttaccagcttccactttaatttagattgtgcagcaaccaaattgattcactacggttttttgccatatatgccctaatgaggttgctgaagagcc |
326 |
Q |
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| T |
31829785 |
catgtttaccagcttcaactttgatttagattgtgcagcaaccaaattgattcactacggttttttgccatatatgccctaatgaggttgctgaagagcc |
31829884 |
T |
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| Q |
327 |
tcaatcacactcaagaaacttacatcggaggaatttatcacgatgaatgtgttttaaatgcagatatataaagtaactagccaattttagatgtggcttc |
426 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31829885 |
tcaatcacactcaagaaacttacatcggaggaatttaccacgatgaatgtgttttaaatgcagatatataaagtaactagccaattttagatgtggcttc |
31829984 |
T |
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| Q |
427 |
tctgttcaaaattcaatctgtatattgtaataaaggtgtgctaatt-aaatgtgcagtgtcacaatggacctagctgaattttcacagaataacctgcaa |
525 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31829985 |
tctgttcaaaattcattctgtatattgtaataaaggtgtgctaattaaaatgtgcagtgtcacaatggacctagctgaattttcacagaataacctgcaa |
31830084 |
T |
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| Q |
526 |
cacatccaattttcttgtgattttcacagaagttttagatatagtgcag |
574 |
Q |
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| T |
31830085 |
cacatccaactttcttgtgattttcacagaagttttagatataatgcag |
31830133 |
T |
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