View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4366-Insertion-7 (Length: 208)
Name: NF4366-Insertion-7
Description: NF4366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4366-Insertion-7 |
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Alignment Details
Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 116712 - 116510
Alignment:
| Q |
7 |
aaaatggccatggtatcattctctgagctcacaagtgta----gaataactcggaaatggaagaaattaatcaagcaggatgggcaatgtaaatccatat |
102 |
Q |
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| T |
116712 |
aaaatggccatggtatcattctctgagcccacaagtgtacgtagaacaactcggaaagggaagaaattaatcaagcaggatgagcaatgtaaatccatat |
116613 |
T |
|
| Q |
103 |
cagtcgaataagacttaggtgtttgatatgctagccaccactgagaatccggtctcaaaaaacacagtaataagtaattcatcgtctgggttacatgatc |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
116612 |
cagtcgaataagacttaggtgtttgatatgctagccaccactgagaacctggtctcaaaaaacacagtaataagtaattcatcgtctgggttacatgatc |
116513 |
T |
|
| Q |
203 |
tgt |
205 |
Q |
| |
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||| |
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|
| T |
116512 |
tgt |
116510 |
T |
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