View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4366_high_2 (Length: 448)
Name: NF4366_high_2
Description: NF4366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4366_high_2 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 15 - 433
Target Start/End: Original strand, 21111296 - 21111714
Alignment:
| Q |
15 |
aaccccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcct |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
21111296 |
aaccccataactataaacatccactttagatgttattggtgaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattct |
21111395 |
T |
|
| Q |
115 |
gaactattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggcttta |
214 |
Q |
| |
|
||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111396 |
gaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggcttta |
21111495 |
T |
|
| Q |
215 |
tatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgt |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111496 |
tatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgt |
21111595 |
T |
|
| Q |
315 |
gttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttct |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21111596 |
gttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaagtctatgcttaccttcagcacaatatccccacatttct |
21111695 |
T |
|
| Q |
415 |
atcaagttcatgtggttaa |
433 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
21111696 |
atcaagttcatgtggttaa |
21111714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 15 - 433
Target Start/End: Original strand, 21130256 - 21130674
Alignment:
| Q |
15 |
aaccccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcct |
114 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21130256 |
aaccccgtaactataaacatccactttagatgttattggtaaattgaaaatccactcaggtgccatatatcctcgtgttcctctaatcattgagaatcct |
21130355 |
T |
|
| Q |
115 |
gaactattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggcttta |
214 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21130356 |
gaactattatcgagattgtttcgattttgtagcttagacaatccaaaatcggctaacttgggctgaaagttagaatcaagaagtatattttgaggcttta |
21130455 |
T |
|
| Q |
215 |
tatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgt |
314 |
Q |
| |
|
||||||||||||| |||||||| | |||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21130456 |
tatcacaatgcaaaatccattccaaacattcttcatgtagatatgctaaaactctagctgttcctaaagcaatatcataccttttagtccaatcaagtgt |
21130555 |
T |
|
| Q |
315 |
gttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttct |
414 |
Q |
| |
|
||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21130556 |
gttggttttggatgaaagattttccgctaaagaaccattttccatgtactcatataccaaaattctatgcttaccttcaacacaatatccccacatttca |
21130655 |
T |
|
| Q |
415 |
atcaagttcatgtggttaa |
433 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
21130656 |
atcaaattcatgtggttaa |
21130674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 433
Target Start/End: Original strand, 18658404 - 18658836
Alignment:
| Q |
1 |
atctcgaacaatataaccccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaa |
100 |
Q |
| |
|
||||| ||||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
18658404 |
atctccaacaatacaaccccataaccataaacatccactttagatgttattggcaaattgaaaatccactcaggggccatatatcctcttgttcctctaa |
18658503 |
T |
|
| Q |
101 |
tcattgagaatcctgaactattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtat |
200 |
Q |
| |
|
||||||||||| ||||| |||||| |||| ||||||| ||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
18658504 |
tcattgagaattctgaattattattaagactgtttcgggttttcagcttagataatccaaaatctgctaacttagggtgaaagttagaatcaagaagtat |
18658603 |
T |
|
| Q |
201 |
attttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcatacctttta |
300 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18658604 |
gttttgaggctttatatcacaatgcaaaatccattccaaacattcttcatgtagataagctagaactttagctgttcctaaagcaatatcatacctttta |
18658703 |
T |
|
| Q |
301 |
ctccaatcaagtgtgttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaat |
400 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18658704 |
ctccagtcaagtgtgttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaagtctatgcttaccttcagcacaat |
18658803 |
T |
|
| Q |
401 |
atccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
|||||||||| || ||||||||||||||||||| |
|
|
| T |
18658804 |
atccccacatatcaatcaagttcatgtggttaa |
18658836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 15 - 386
Target Start/End: Original strand, 21123128 - 21123499
Alignment:
| Q |
15 |
aaccccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcct |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
21123128 |
aaccccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattct |
21123227 |
T |
|
| Q |
115 |
gaactattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggcttta |
214 |
Q |
| |
|
||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21123228 |
gaattattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggttgaaagttagaatcaagaagtatattttgaggcttta |
21123327 |
T |
|
| Q |
215 |
tatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgt |
314 |
Q |
| |
|
||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21123328 |
tatcacaatgcaaaatccactccatacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgt |
21123427 |
T |
|
| Q |
315 |
gttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgctt |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21123428 |
gttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgctt |
21123499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 19 - 433
Target Start/End: Complemental strand, 21108562 - 21108157
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcctgaac |
118 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| | |||| |
|
|
| T |
21108562 |
ccataactataaacatccaccttagatgttattggcaaattgaaaatccattcaggtgccatataccctcttgttcctctaatcattgagatgcatgaat |
21108463 |
T |
|
| Q |
119 |
tattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
218 |
Q |
| |
|
||||| || ||||| | ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
21108462 |
tatta---aggttgttcctgttttgcagctttgacaatccaaaatcggctaacttgggctggaagttagaatcaagaagtatgttttgtggctttatatc |
21108366 |
T |
|
| Q |
219 |
acaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgtgtta |
318 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||||||| || | |||||| ||| || |||| |||| | ||||||||||||||||||||| ||| |
|
|
| T |
21108365 |
acaatgcaaaatccactccaaacattcttcatgtagatatgctaaaactcttgctattgataaaacaattttgtaccttttactccaatcaagt---tta |
21108269 |
T |
|
| Q |
319 |
gttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatca |
418 |
Q |
| |
|
|||| || | ||||| |||||||| ||||||||||||||||| || ||||| | ||||| || || ||||| ||||||||||||||||| |||| |
|
|
| T |
21108268 |
---ttagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatca |
21108172 |
T |
|
| Q |
419 |
agttcatgtggttaa |
433 |
Q |
| |
|
| |||||||| |||| |
|
|
| T |
21108171 |
aattcatgtgattaa |
21108157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 19 - 433
Target Start/End: Complemental strand, 21098943 - 21098538
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcctgaac |
118 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| || ||||||||||||||||| || |||||||| |||| ||||||||||||||| || | | |||| |
|
|
| T |
21098943 |
ccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggggccatataccctcttgttcctctaatcatagatacacttgaat |
21098844 |
T |
|
| Q |
119 |
tattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
218 |
Q |
| |
|
| || |||||||||| ||||| |||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21098843 |
tgttg---agattgtttctgttttgcagcttagacaatccaaaatccgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatc |
21098747 |
T |
|
| Q |
219 |
acaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgtgtta |
318 |
Q |
| |
|
|||||| || |||||||| | |||||||||||||||||| || | |||||| || || ||||||||| | ||||||||||||||||||||| ||| |
|
|
| T |
21098746 |
acaatgtaaaatccattccaaacattcttcatgtagatatgctaaaactcttcctattgataaagcaattttgtaccttttactccaatcaagt---tta |
21098650 |
T |
|
| Q |
319 |
gttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatca |
418 |
Q |
| |
|
|||| || | ||||| |||||||| ||||||||||||||||| || ||||| | ||||| || || ||||| ||||||||||||||||| |||| |
|
|
| T |
21098649 |
---ttagccgataagttttcggctaaagaaccattttccatgtactcgtaaaccaatagtctatattttccctcagcgcaatatccccacatttcgatca |
21098553 |
T |
|
| Q |
419 |
agttcatgtggttaa |
433 |
Q |
| |
|
| |||||||| |||| |
|
|
| T |
21098552 |
aattcatgtgattaa |
21098538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 433
Target Start/End: Original strand, 29213149 - 29213242
Alignment:
| Q |
340 |
gctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
|||||||| ||||| | |||| ||||||| || || |||||||| | || || |||||||| ||||||| ||| ||||| ||||||||||||| |
|
|
| T |
29213149 |
gctaaagaaccattatacatgaactcatagacaaacattctatgtattccctctgcacaataaccccacaattcaatcaaattcatgtggttaa |
29213242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 280; Significance: 1e-156; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 1 - 428
Target Start/End: Complemental strand, 39132494 - 39132067
Alignment:
| Q |
1 |
atctcgaacaatataaccccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaa |
100 |
Q |
| |
|
||||| ||||| | || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
39132494 |
atctccaacaaaacaatcccataactataaacatccactttagatgttattggtaaattgaaaacccattcaggagccatatatcctcttgttcctctaa |
39132395 |
T |
|
| Q |
101 |
tcattgagaatcctgaactattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtat |
200 |
Q |
| |
|
||||||||||| ||||| || ||| | |||||||| |||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
39132394 |
tcattgagaattctgaattactattgacattgtttctatttctcagcttagacaatccaaagtctgctaacttgggttgatagttagaatcaagaagtat |
39132295 |
T |
|
| Q |
201 |
attttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcatacctttta |
300 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| || | ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
39132294 |
attttgaggctttatatcacaatgtaaaatccactccaaacattcttcatgtagataagctaggactctagctgttcctaaagcaatatcatacctttta |
39132195 |
T |
|
| Q |
301 |
ctccaatcaagtgtgttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaat |
400 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
39132194 |
ctccaatcaagcatgttagttttagatgaaagattttcagctaaagagtcattcttcatgtactcatataccaaaattctatgcttaccttcaacacaat |
39132095 |
T |
|
| Q |
401 |
atccccacatttctatcaagttcatgtg |
428 |
Q |
| |
|
||||||||||||| || ||||||||||| |
|
|
| T |
39132094 |
atccccacatttcaattaagttcatgtg |
39132067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 6e-38; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 26675300 - 26675591
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcctgaac |
118 |
Q |
| |
|
||||||||||||||||| || || || || || || || ||||||||||||||||||||||| || |||| ||||||||| ||| ||||||| | |||| |
|
|
| T |
26675300 |
ccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaat |
26675399 |
T |
|
| Q |
119 |
tattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
218 |
Q |
| |
|
||||| |||||||| | || | |||||||||||| ||||||||| ||| ||||| | | | ||| |||| |||||| ||||||||||||||||| |
|
|
| T |
26675400 |
tatta---agattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatc |
26675496 |
T |
|
| Q |
219 |
acaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtg |
313 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| | | || ||||||| |||||| | |||||| |||| ||||||||||| |
|
|
| T |
26675497 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtg |
26675591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 433
Target Start/End: Original strand, 26698634 - 26698917
Alignment:
| Q |
144 |
tagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacat |
243 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| || ||| | | || |||| |||||| ||||| ||||||||||| |||||||| ||||| || | ||| |
|
|
| T |
26698634 |
tagcttagacaaaccaaaatctgctaccttaggttgataatccgagtcaacaagtatgttttgtggctttatatcgcaatgcaaaatccactccaaacac |
26698733 |
T |
|
| Q |
244 |
tcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgtgttagttttagatgaaagattttcagcta |
343 |
Q |
| |
|
||||| |||| |||||||||| | | || ||||| | |||||| | ||||||||||| |||||||||| | | || ||||| ||||| ||||||| |
|
|
| T |
26698734 |
tcttcgtgtaaataagcaagaccctttgcagttcccatagcaatgttataccttttaccccaatcaagt---tcactt---gatgagagattatcagcta |
26698827 |
T |
|
| Q |
344 |
aagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
||| |||||||||||||||||||| ||||| | ||| || || || || |||||||| ||||||||| ||||||| |||||||| |||| |
|
|
| T |
26698828 |
aagtaccattttccatgtactcataaaccaacaatctgtgttttccctcggcacaataaccccacattcctatcaaattcatgtgattaa |
26698917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 433
Target Start/End: Original strand, 26733797 - 26734080
Alignment:
| Q |
144 |
tagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacat |
243 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| || ||| | | || |||| |||||| ||||| ||||||||||| |||||||| ||||| || | ||| |
|
|
| T |
26733797 |
tagcttagacaaaccaaaatctgctaccttaggttgataatccgagtcaacaagtatgttttgtggctttatatcgcaatgcaaaatccactccaaacac |
26733896 |
T |
|
| Q |
244 |
tcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgtgttagttttagatgaaagattttcagcta |
343 |
Q |
| |
|
||||| |||| |||||||||| | | || ||||| | |||||| | ||||||||||| |||||||||| | | || ||||| ||||| ||||||| |
|
|
| T |
26733897 |
tcttcgtgtaaataagcaagaccctttgcagttcccatagcaatgttataccttttaccccaatcaagt---tcactt---gatgagagattatcagcta |
26733990 |
T |
|
| Q |
344 |
aagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
||| |||||||||||||||||||| ||||| | ||| || || || || |||||||| ||||||||| ||||||| |||||||| |||| |
|
|
| T |
26733991 |
aagtaccattttccatgtactcataaaccaacaatctgtgttttccctcggcacaataaccccacattcctatcaaattcatgtgattaa |
26734080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 144 - 433
Target Start/End: Original strand, 26737022 - 26737305
Alignment:
| Q |
144 |
tagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacat |
243 |
Q |
| |
|
|||||||||||| ||||||||||| | ||| || || | | ||| |||| |||||| ||||| ||||||||||| |||||||| ||||| || | ||| |
|
|
| T |
26737022 |
tagcttagacaaaccaaaatctgcaaccttaggtcgataatcagagtcaacaagtatgttttgcggctttatatcgcaatgcaaaatccactccaaacac |
26737121 |
T |
|
| Q |
244 |
tcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgtgttagttttagatgaaagattttcagcta |
343 |
Q |
| |
|
|||||||||| |||||||||| | | || ||||||| ||||||| |||| || || | |||||||||| | | || ||||| ||||| ||||||| |
|
|
| T |
26737122 |
tcttcatgtaaataagcaagacattttgcagttcctatagcaataccatatctctttccccaatcaagt---tca---tttgatgagagattatcagcta |
26737215 |
T |
|
| Q |
344 |
aagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
||| |||||||||||||||||||| ||||| | | |||| || || ||||||||||| ||||||||| | || || ||||||||||||| |
|
|
| T |
26737216 |
aagtaccattttccatgtactcataaaccaacaatttatgttttccctcagcacaataaccccacattccaattaaattcatgtggttaa |
26737305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 144 - 433
Target Start/End: Original strand, 26744033 - 26744316
Alignment:
| Q |
144 |
tagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacat |
243 |
Q |
| |
|
|||||| ||||| |||||||| |||| ||| || || | | ||| |||| |||||| ||||| |||||||||||||||||||| ||||| || | |||| |
|
|
| T |
26744033 |
tagcttggacaaaccaaaatccgctaccttcggttggtaatcagagtcaacaagtatgttttgcggctttatatcacaatgcaaaatccactccaaacat |
26744132 |
T |
|
| Q |
244 |
tcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgtgttagttttagatgaaagattttcagcta |
343 |
Q |
| |
|
||||| |||| ||||||||| | | || ||||| | |||||| | |||||||||||||||||||||| ||| || ||||||||||| || |||| |
|
|
| T |
26744133 |
tcttcgtgtaaataagcaaggccctttgcagttcccatagcaatgttataccttttactccaatcaagt---tta---tttgatgaaagattatcggcta |
26744226 |
T |
|
| Q |
344 |
aagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
||| || ||||||||| |||| || ||||| | |||||| || || ||||||||||| |||||||| | || |||||||||||||||| |
|
|
| T |
26744227 |
aagtaccgttttccatgcactcgtaaaccaacaatctatgttttccctcagcacaatagccccacataccaattaagttcatgtggttaa |
26744316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 26690781 - 26690539
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcctgaac |
118 |
Q |
| |
|
||||| ||||||||||| || || || || || || || ||||||||||||||||||||||| || |||| ||||||||| ||| ||||||| | ||| |
|
|
| T |
26690781 |
ccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttga-- |
26690684 |
T |
|
| Q |
119 |
tattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
218 |
Q |
| |
|
||||||||||||||| | | | ||| ||||||||| |||||||| |||| |||||| || | || || |||| ||||| ||||| |||||||| || |
|
|
| T |
26690683 |
-attatcaagattgttcctttgtagtaacttagacaacccaaaatccgctaccttgggttggtaattggagtcaattagtatgttttgcggctttatgtc |
26690585 |
T |
|
| Q |
219 |
acaatgcaatatccattcgagacattcttcatgtagataagcaaga |
264 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| |
|
|
| T |
26690584 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaaga |
26690539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 26732092 - 26731850
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcctgaac |
118 |
Q |
| |
|
||||| ||||||||||| || || || || || || || ||||||||||||||||||||||| || |||| ||||||||| ||| ||||||| | ||| |
|
|
| T |
26732092 |
ccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttga-- |
26731995 |
T |
|
| Q |
119 |
tattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
218 |
Q |
| |
|
||||||||||||||| | | | ||| ||||||||| |||||||| |||| |||||| || | | ||| |||| ||||| ||||| |||||||| || |
|
|
| T |
26731994 |
-attatcaagattgttcctttgtagtaacttagacaacccaaaatccgctaccttgggttggtaatcagagtcaattagtatgttttgcggctttatgtc |
26731896 |
T |
|
| Q |
219 |
acaatgcaatatccattcgagacattcttcatgtagataagcaaga |
264 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| |
|
|
| T |
26731895 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaaga |
26731850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 433
Target Start/End: Original strand, 26713786 - 26714069
Alignment:
| Q |
144 |
tagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacat |
243 |
Q |
| |
|
|||||||||||| ||||||||||| | ||| || || | | | | |||| |||||| ||||| ||||||||||| |||||||| ||||| || | ||| |
|
|
| T |
26713786 |
tagcttagacaaaccaaaatctgcaaccttaggtcgataatcatagtcaacaagtatgttttgcggctttatatcgcaatgcaaaatccactccaaacac |
26713885 |
T |
|
| Q |
244 |
tcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtgtgttagttttagatgaaagattttcagcta |
343 |
Q |
| |
|
|||||||||| |||||||||| | | || ||||||| ||||||| |||| || || | |||||||||| | ||| ||| | ||||| ||||||| |
|
|
| T |
26713886 |
tcttcatgtaaataagcaagacattttgcagttcctatagcaataccatatctctttccccaatcaagt----tcattt--gataagagattatcagcta |
26713979 |
T |
|
| Q |
344 |
aagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
||| |||||||||||||||||||| ||||| | | |||| || || ||||||||||| ||||||||| | ||||| ||||||||||||| |
|
|
| T |
26713980 |
aagtaccattttccatgtactcataaaccaacaatttatgttttccctcagcacaataaccccacattccaatcaaattcatgtggttaa |
26714069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 26694942 - 26694700
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaatcctgaac |
118 |
Q |
| |
|
||||| ||||||||||| || || || || || || || |||||||||||||||||| |||| || |||| ||||||||| ||| ||||||| | |||| |
|
|
| T |
26694942 |
ccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtcccatgtaacctcttgttcctctcatccttgagaaacttgaa- |
26694844 |
T |
|
| Q |
119 |
tattatcaagattgtttcgattttgtagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
218 |
Q |
| |
|
||||||| |||||| | | | || ||||||||| |||||||| |||| |||||| || | || || |||| ||||| ||||| |||||||| || |
|
|
| T |
26694843 |
--ttatcaaaattgttcctttgtactaacttagacaacccaaaatccgctaccttgggttggtaattggagtcaattagtatgttttgcggctttatgtc |
26694746 |
T |
|
| Q |
219 |
acaatgcaatatccattcgagacattcttcatgtagataagcaaga |
264 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| |
|
|
| T |
26694745 |
acaatgcaaaatccactccaaacattcttcatgtaaataggcaaga |
26694700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 433
Target Start/End: Original strand, 26751004 - 26751241
Alignment:
| Q |
190 |
tcaagaagtatattttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatat |
289 |
Q |
| |
|
|||| |||||| ||||| || |||||||| |||||||| ||||| || | ||||||||| |||| ||| ||||| | | || ||||| | |||||| | |
|
|
| T |
26751004 |
tcaacaagtatgttttgcggttttatatcgcaatgcaaaatccactccaaacattcttcgtgtaaatacgcaagtccctttgcagttcccatagcaatgt |
26751103 |
T |
|
| Q |
290 |
cataccttttactccaatcaagtgtgttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttacc |
389 |
Q |
| |
|
|||||| |||| |||||||||| | ||| ||||| ||||| |||||||||| || ||||||||||||||||| ||||| | ||||||||| || |
|
|
| T |
26751104 |
tatacctcttaccccaatcaagt----tcattt--gatgagagattatcagctaaagtacccttttccatgtactcataaaccaacaatctatgctttcc |
26751197 |
T |
|
| Q |
390 |
ttcagcacaatatccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
||||||||||| |||||||| | ||||| ||||||||||||| |
|
|
| T |
26751198 |
ctcagcacaataaccccacataccaatcaaattcatgtggttaa |
26751241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 433
Target Start/End: Original strand, 47212387 - 47212480
Alignment:
| Q |
340 |
gctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacatttctatcaagttcatgtggttaa |
433 |
Q |
| |
|
|||||||| ||||| |||||| ||||||| || | |||||||| || || || |||||||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
47212387 |
gctaaagaaccattatccatgaactcatacacaagcattctatgttttccctctgcacaataaccccacatttcaatcaaattcatgtggttaa |
47212480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 431
Target Start/End: Complemental strand, 47193641 - 47193415
Alignment:
| Q |
199 |
atattttgaggctttatatcacaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttt |
298 |
Q |
| |
|
||||||||||| || | ||||||||| || | |||||| | ||| |||||||||| |||||| | | || |||||||||| | ||| | || | |||| | |
|
|
| T |
47193641 |
atattttgaggtttcacatcacaatgtaaaacccattccaaacactcttcatgtaaataagccaaacctttagctgttccaacagctacattaaacctct |
47193542 |
T |
|
| Q |
299 |
tactccaatcaagtgtgttagttttagatgaaagattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcaca |
398 |
Q |
| |
|
|| |||||||||||| |||| | | ||||| || |||||||| |||| ||| || |||||||| ||||||| ||||| || |||||| |||| |
|
|
| T |
47193541 |
tattccaatcaagtgaattag------aacatagattctccgctaaagaaccatgttctatatactcatagaccaaaagcctatgtttcccttcaacaca |
47193448 |
T |
|
| Q |
399 |
atatccccacatttctatcaagttcatgtggtt |
431 |
Q |
| |
|
|||||||||||| || || || ||||| ||||| |
|
|
| T |
47193447 |
atatccccacatatcaattaaattcatatggtt |
47193415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 9792615 - 9792536
Alignment:
| Q |
331 |
agattttcagctaaagatccattttccatgtactcatataccaaaattctatgcttaccttcagcacaatatccccacat |
410 |
Q |
| |
|
||||| ||| |||| || |||| |||||| |||||||| ||||||| ||||| || |||||| |||||||||||||||| |
|
|
| T |
9792615 |
agattctcaactaatgaaccatgttccatatactcataaaccaaaagtctatttttcccttcaacacaatatccccacat |
9792536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 26713664 - 26713755
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaa |
110 |
Q |
| |
|
||||| ||||||||||||||||| || || || | | ||||||| ||||||||||||||| || |||||||| |||| |||| ||||||| |
|
|
| T |
26713664 |
ccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattcaggtgccatgtaacctcgtgtccctcgaatccttgagaa |
26713755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 26736900 - 26736991
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctctaatcattgagaa |
110 |
Q |
| |
|
||||| ||||||||||||||||| || || || | | ||||||| ||||||||||||||| || |||||||| |||| |||| ||||||| |
|
|
| T |
26736900 |
ccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattcaggtgccatgtaacctcgtgtccctcgaatccttgagaa |
26736991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 47212075 - 47212153
Alignment:
| Q |
19 |
ccataactataaacatccactttagatgttatcggtaaattgaaaatccattcaggtgccatatatcctcgtgttcctc |
97 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| | ||| |||||||| ||||||||||| || |||| |||||||| |
|
|
| T |
47212075 |
ccatagctataaacatcaactttagatgttattgaatgattcaaaatccactcaggtgccatgtaacctcttgttcctc |
47212153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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