View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4367-Insertion-4 (Length: 556)
Name: NF4367-Insertion-4
Description: NF4367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4367-Insertion-4 |
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Alignment Details
Target: chr7 (Bit Score: 454; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 44 - 536
Target Start/End: Original strand, 34062130 - 34062622
Alignment:
| Q |
44 |
gtttggtttatgagacaaaacattcacaaaagaagctgaatgtatgtgttatggcattggatatgtgagctttgttggtttgaaaaaagagagagtgtgg |
143 |
Q |
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| T |
34062130 |
gtttggtttatgagacaaaacattcacaaaagaagctgaatgtatgtgttatggcattggatatgtgagctttgttggtttgaaaaaagagagagtgtgg |
34062229 |
T |
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| Q |
144 |
ggcggcacgaaaagaagagaaagaaaatgatagaatactatctatcatgatgacattattctaaatttttgcnnnnnnnnncattgttgctgtctggaaa |
243 |
Q |
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| T |
34062230 |
ggcggcacgaaaagaagagaaagaaaatgatagaatactatctatcatgatgacattattctaaatttttcctttttttttcattgttgctgtctggaaa |
34062329 |
T |
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| Q |
244 |
gaaaaccttttactctgtcatgctttcatgttgtgagatctatgttgtgttgtgtgggacatgtcatggtaattttggtttagagtttcattaatgttca |
343 |
Q |
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| T |
34062330 |
gaaaaccttttactctgtcatgctttcatgttgtgagatctatgttgtgttgtgtgggacatgtcatggtaattttggtttagagtttcattaatgttca |
34062429 |
T |
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| Q |
344 |
atttaattcatgatgactatggtgttcacgagtcaccttggttgttttgtttcatggtaattttggtttaggagaattctagagttcatatttttcattg |
443 |
Q |
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| T |
34062430 |
atttaattcatgatgactatggtgttcacgggtcaccttggttgttttgtttcatggtaattttggtttaggagaattctagagttcatatttttcattg |
34062529 |
T |
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| Q |
444 |
ttttgaccaattgagattgggaattacaatttcatggctaataaaatgttaccaatgatttaataatttagatatgcatgtatcaatatagtt |
536 |
Q |
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| T |
34062530 |
ttttgaccaattgagattgggaattacaatttcatggttaataaaatgttaccaatgatttaataatttagatatgcatgtatcaatatagtt |
34062622 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 556
Target Start/End: Original strand, 34062646 - 34062674
Alignment:
| Q |
528 |
aatatagttcaatgttattttcttctaaa |
556 |
Q |
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| T |
34062646 |
aatatagttcaatgttattttcttctaaa |
34062674 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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