View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4367-Insertion-6 (Length: 278)
Name: NF4367-Insertion-6
Description: NF4367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4367-Insertion-6 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 5 - 278
Target Start/End: Original strand, 2259075 - 2259348
Alignment:
| Q |
5 |
acatatacaacagaagatatgcaagcaaggaacacaaaatcaaccttaaaacaattagcaacttaactttgaagtgggaattcaatgcaggcaaagacat |
104 |
Q |
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| T |
2259075 |
acatatacaacagaagatatgcaagcaaggaacacaaaatcaaccttaaaacaattagcaacttaactttgaagtgggaattcaatgcaggcaaagacat |
2259174 |
T |
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| Q |
105 |
aactgcaacaccagcaattttcaatggaacaatatattttccttcatggaatggtttaatatttgcagtgagagaaattgacggaactcttgtttggaaa |
204 |
Q |
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| T |
2259175 |
aactgcaacaccagcaattttcaatggaacaatatattttccttcatggaatggtttaatatttgcagtgagagaaattgatggaactcttgtttggaaa |
2259274 |
T |
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| Q |
205 |
aagaatttgacaaaattaactggtctagattcaataggttttattgcaaatgttaattggacagtggctagggc |
278 |
Q |
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| T |
2259275 |
aagaatttgacaaaattaactggtctagattcaataggttttattgcaaatgttaattggacagtggctagggc |
2259348 |
T |
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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 2229956 - 2229869
Alignment:
| Q |
72 |
tttgaagtgggaattcaatgcaggcaaagacataactgcaacaccagcaattttcaatggaacaatatattttccttcatggaatggt |
159 |
Q |
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| T |
2229956 |
tttgaagtggaaattcaatgcaggcaaagatattacagcaacaccaacaatatacaatggtacaatttattttccatgctggaatggt |
2229869 |
T |
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