View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4367_high_1 (Length: 545)
Name: NF4367_high_1
Description: NF4367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4367_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 488; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 488; E-Value: 0
Query Start/End: Original strand, 19 - 534
Target Start/End: Complemental strand, 26276769 - 26276254
Alignment:
| Q |
19 |
ataaagacctttatttggagcggtgatatcactcaggcaaaaatttgtacggtggcttggagggatttatgtaaaccaaatgaggaaggaagtctatctg |
118 |
Q |
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| T |
26276769 |
ataaagacctttatttggagcggtgatatcactcaggcaaaaatttgtacggtggcttggagggatttatgtaaaccaaatgaggaaggaggtctatctg |
26276670 |
T |
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| Q |
119 |
ttaaggacccaaggttggtcaattcatcctccctgctgcagctttgttggtctttagtcacttctgacgagcaatggacacaaatgtgtagaacccggta |
218 |
Q |
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| T |
26276669 |
tgaaggacccaaggctggtcaattcatcctccctgctgcagctttgttggtctttagtcacttctgacgagcaatggacacaaatgtgtagaacccggta |
26276570 |
T |
|
| Q |
219 |
cttaaagaatggaaagcctatcacctacaatagagcgtcttcagtttggtcgggaatgagagtccatctcagaatgattgctgagcaatcctcatggtca |
318 |
Q |
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| T |
26276569 |
cttaaagaatggaaagcctatcacctacaatagagcgtcttcattttggtcgggaatgatagtccatctcagaatgaatgctgagcaatcctcatggtca |
26276470 |
T |
|
| Q |
319 |
ataggtaatgggaacactgtcaacttctggacagataaatggttagaacaatctattgtggaatctcttaatatccctctgcacatgcaccctgccctta |
418 |
Q |
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| T |
26276469 |
ataggtaatgggaacactgtcaacttctggacagacaaatggttagaacaatctattgtggaatctcttaatatccctctgcacatgcaccctgccctta |
26276370 |
T |
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| Q |
419 |
acatgaaggtagcagattacattctggatggtaattggaatatccccatgtatctgatacaaaagtctaaagagttagcaaagcaaattctcacggttac |
518 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26276369 |
acatgaaggtagcagattacattctggatggtaattggaatatccccatgtatctgatacaaaagtctaaagagttagcaaagcaaattctcacggttac |
26276270 |
T |
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| Q |
519 |
cctctctattgatgat |
534 |
Q |
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|||||||||||||||| |
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| T |
26276269 |
cctctctattgatgat |
26276254 |
T |
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