View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4368-Insertion-9 (Length: 205)
Name: NF4368-Insertion-9
Description: NF4368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4368-Insertion-9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 41531913 - 41532108
Alignment:
| Q |
7 |
aaatatttcaccgatttttggtcttgaaagcaccaaatattaaactaaacatcaaatgaaaattttgtatggactaaacatagtatgagaataatccnnn |
106 |
Q |
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| T |
41531913 |
aaatatttcaccgatttttggtcttgaaagcaccaaatattaaactaaacatcaaatgaaaattttgtatggactaaacatagtatgagaataatcc--- |
41532009 |
T |
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| Q |
107 |
nnnnnnnnnnnnnnnnnncatagtatgagaagttcacaacacatcatccttagaaatattttgtcacagtaagatcgttcgtgaaaaaatgagtgatag |
205 |
Q |
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| T |
41532010 |
aaaacaaaaaaaaaaaaacatagtatgagaagttcacaacacatcatccttagaaatattttgtcacagtaagattgttcgtgaaaaaatgagtgatag |
41532108 |
T |
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