View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4368_low_6 (Length: 201)
Name: NF4368_low_6
Description: NF4368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4368_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 1803425 - 1803277
Alignment:
| Q |
51 |
gttgggtcatgaagaaagcacgggggttcatctactatattagatcaagaataataaaacgagagagtttgacaacacatcttaaccaaaaatcttaaag |
150 |
Q |
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| T |
1803425 |
gttgggtcatgaaaaaagtataggggttcatctactatattagatcaagaataataaaacgagagagtttgacaacacatcttaaccaaaaactttaaag |
1803326 |
T |
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| Q |
151 |
acatttaatttataagtt-----ctctcaatgatatattcttcgacatc |
194 |
Q |
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| T |
1803325 |
acatttaatttataagctaagtcctctcaatgatatattcttcaacatc |
1803277 |
T |
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