View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4370-Insertion-6 (Length: 343)
Name: NF4370-Insertion-6
Description: NF4370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4370-Insertion-6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 8 - 343
Target Start/End: Complemental strand, 42600705 - 42600369
Alignment:
| Q |
8 |
tgtttttcttttggaatgacaatgttaattaatatgttagtggacaagtgagaaattatgtttggagttaaaaactacatataatttcatgttagaatta |
107 |
Q |
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| T |
42600705 |
tgtttttcttttggaatgacaatgttaattaatatgttagtggacaagtgagaaattatgtttggagttaaaaactacatataatttcatgttagaatta |
42600606 |
T |
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| Q |
108 |
atgatggaataaaatccatttcaattgagattacttaaacatgtgaaaattaattttatgtatctgaaatcatttttggactccctttatggtccgatac |
207 |
Q |
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| T |
42600605 |
atgatggaataaaatccatttcaattgagattacttaaacatgtgaaaattaattttatgtatctgaaatcatttttgg-ttccctttatggtccgatac |
42600507 |
T |
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| Q |
208 |
--atataccgagggcaagaggcaagagagatgaatgatgccttaaatatcacaatagacacattaagtatgcatatttgaaatctaaactttacttcatg |
305 |
Q |
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| T |
42600506 |
atatataccgagggcaagaggcaagagagatgaatgatgccttaaatatcacaatagacacattaagtatgcatatttgaaatctaaactttacttcatg |
42600407 |
T |
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| Q |
306 |
caaatattgtctcattcatatcaaaatttaaaccacct |
343 |
Q |
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| T |
42600406 |
caaatattgtctcattcagatcaaaatttaaaccacct |
42600369 |
T |
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