View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4372-Insertion-1 (Length: 1238)

Name: NF4372-Insertion-1
Description: NF4372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4372-Insertion-1
NF4372-Insertion-1
[»] chr5 (29 HSPs)
chr5 (8-414)||(14504929-14505338)
chr5 (514-711)||(14506079-14506277)
chr5 (905-1036)||(14083024-14083160)
chr5 (905-1036)||(29541851-29541987)
chr5 (905-1036)||(3260367-3260503)
chr5 (905-1036)||(33115167-33115303)
chr5 (905-1036)||(42663907-42664043)
chr5 (703-808)||(14506349-14506445)
chr5 (905-1007)||(27737994-27738098)
chr5 (905-1007)||(31905997-31906101)
chr5 (905-1011)||(33082382-33082490)
chr5 (905-1007)||(33386913-33387017)
chr5 (905-1007)||(10900692-10900796)
chr5 (905-1007)||(37046122-37046226)
chr5 (905-1007)||(41741657-41741761)
chr5 (926-1006)||(2526865-2526947)
chr5 (917-1007)||(8957949-8958041)
chr5 (905-1011)||(25256274-25256382)
chr5 (905-1011)||(25320063-25320171)
chr5 (905-1007)||(33233005-33233108)
chr5 (905-965)||(41039587-41039647)
chr5 (905-1007)||(7071459-7071565)
chr5 (905-1011)||(11017870-11017978)
chr5 (905-965)||(19357066-19357126)
chr5 (905-1007)||(40979975-40980079)
chr5 (909-972)||(20069125-20069188)
chr5 (905-1007)||(39236066-39236169)
chr5 (411-448)||(14506043-14506080)
chr5 (905-1011)||(4295486-4295594)
[»] chr8 (24 HSPs)
chr8 (905-1036)||(193916-194052)
chr8 (905-1036)||(721520-721656)
chr8 (905-1036)||(882627-882763)
chr8 (905-1036)||(30211114-30211250)
chr8 (905-1036)||(629244-629380)
chr8 (905-1036)||(30982640-30982776)
chr8 (905-1036)||(34773859-34773995)
chr8 (905-1011)||(924585-924693)
chr8 (905-1011)||(35801746-35801854)
chr8 (928-1011)||(13016231-13016316)
chr8 (905-1007)||(8417218-8417322)
chr8 (905-965)||(44240713-44240773)
chr8 (905-965)||(2026116-2026176)
chr8 (905-1007)||(26575786-26575890)
chr8 (905-1007)||(45275832-45275936)
chr8 (905-972)||(17073665-17073732)
chr8 (905-972)||(17574538-17574605)
chr8 (917-982)||(2598518-2598584)
chr8 (908-972)||(23018301-23018365)
chr8 (905-1006)||(36821058-36821159)
chr8 (905-962)||(11071082-11071139)
chr8 (454-511)||(23141766-23141823)
chr8 (804-836)||(194121-194153)
chr8 (804-836)||(308958-308990)
[»] chr7 (22 HSPs)
chr7 (905-1036)||(31012026-31012162)
chr7 (905-1036)||(25341007-25341143)
chr7 (905-1007)||(26826931-26827035)
chr7 (905-972)||(25191294-25191361)
chr7 (905-1007)||(4035898-4036002)
chr7 (905-972)||(37371260-37371327)
chr7 (907-1012)||(30825710-30825816)
chr7 (905-1009)||(47085274-47085380)
chr7 (905-1007)||(298101-298205)
chr7 (905-1007)||(12910474-12910577)
chr7 (905-1007)||(39857532-39857636)
chr7 (905-1011)||(40233852-40233960)
chr7 (905-1007)||(41065319-41065423)
chr7 (905-972)||(25472205-25472272)
chr7 (905-972)||(45203104-45203171)
chr7 (917-1007)||(1999670-1999762)
chr7 (905-1007)||(15000432-15000536)
chr7 (905-1007)||(26827196-26827300)
chr7 (905-1011)||(32451310-32451418)
chr7 (905-1007)||(43664280-43664384)
chr7 (905-972)||(39957939-39958006)
chr7 (905-1007)||(30139262-30139366)
[»] chr6 (8 HSPs)
chr6 (905-1036)||(30019750-30019886)
chr6 (926-1006)||(4147391-4147473)
chr6 (905-989)||(21515135-21515219)
chr6 (913-1007)||(10683727-10683823)
chr6 (905-1007)||(31745444-31745548)
chr6 (905-989)||(27825576-27825661)
chr6 (905-989)||(921628-921712)
chr6 (454-511)||(1599741-1599798)
[»] chr4 (25 HSPs)
chr4 (905-1036)||(24035631-24035767)
chr4 (905-1036)||(24247077-24247213)
chr4 (905-1036)||(39382449-39382585)
chr4 (905-1036)||(49128188-49128324)
chr4 (905-1007)||(16202572-16202676)
chr4 (905-1006)||(26459543-26459646)
chr4 (905-1006)||(30417834-30417937)
chr4 (905-972)||(50523308-50523375)
chr4 (905-989)||(39733394-39733479)
chr4 (905-972)||(48407505-48407572)
chr4 (905-1007)||(22605798-22605900)
chr4 (905-1011)||(28912166-28912271)
chr4 (905-1007)||(28963297-28963401)
chr4 (905-1007)||(29385485-29385589)
chr4 (905-1007)||(45106336-45106440)
chr4 (905-1007)||(51833498-51833602)
chr4 (905-1006)||(53663074-53663177)
chr4 (905-1007)||(56561046-56561149)
chr4 (905-989)||(36212797-36212882)
chr4 (917-1011)||(5937367-5937463)
chr4 (905-1011)||(53403565-53403673)
chr4 (905-960)||(38768403-38768458)
chr4 (454-498)||(13228751-13228795)
chr4 (905-972)||(8510737-8510804)
chr4 (905-968)||(29810030-29810092)
[»] chr3 (27 HSPs)
chr3 (905-1036)||(1528038-1528174)
chr3 (905-1036)||(47140780-47140916)
chr3 (905-1036)||(51124800-51124936)
chr3 (905-1036)||(38469713-38469849)
chr3 (905-1032)||(47697226-47697358)
chr3 (905-1036)||(52693072-52693208)
chr3 (909-1011)||(39252036-39252140)
chr3 (905-1007)||(48181624-48181728)
chr3 (905-989)||(11264275-11264360)
chr3 (905-1011)||(28884233-28884341)
chr3 (905-1007)||(30811267-30811371)
chr3 (905-1007)||(33025219-33025323)
chr3 (905-1007)||(33329395-33329499)
chr3 (905-1006)||(44329195-44329298)
chr3 (905-965)||(42275139-42275199)
chr3 (905-1007)||(48253932-48254036)
chr3 (905-974)||(51230298-51230367)
chr3 (905-1011)||(42074889-42074997)
chr3 (905-965)||(45151215-45151275)
chr3 (905-987)||(5104739-5104822)
chr3 (905-972)||(50392256-50392323)
chr3 (905-1007)||(44610270-44610373)
chr3 (905-1007)||(39267096-39267200)
chr3 (905-989)||(40237834-40237919)
chr3 (907-972)||(41536371-41536436)
chr3 (454-511)||(50331929-50331986)
chr3 (948-1007)||(53686564-53686625)
[»] chr2 (18 HSPs)
chr2 (905-1036)||(14380637-14380773)
chr2 (905-1036)||(31686350-31686486)
chr2 (905-1036)||(31787180-31787316)
chr2 (905-1036)||(40255040-40255176)
chr2 (905-1036)||(44282705-44282841)
chr2 (905-1007)||(7474092-7474196)
chr2 (905-1011)||(17481349-17481457)
chr2 (905-1007)||(43341705-43341809)
chr2 (905-1007)||(13896544-13896647)
chr2 (905-1007)||(14037161-14037264)
chr2 (905-1007)||(35457615-35457719)
chr2 (905-1007)||(37640192-37640296)
chr2 (905-989)||(2442661-2442746)
chr2 (905-989)||(16765723-16765808)
chr2 (905-1007)||(32496639-32496743)
chr2 (905-972)||(43695630-43695697)
chr2 (454-511)||(3395423-3395480)
chr2 (905-989)||(33597639-33597724)
[»] chr1 (30 HSPs)
chr1 (905-1036)||(5271036-5271172)
chr1 (905-1036)||(15353690-15353826)
chr1 (905-1036)||(26821867-26822003)
chr1 (905-1036)||(36495910-36496046)
chr1 (905-1036)||(38627749-38627885)
chr1 (905-1036)||(50978356-50978492)
chr1 (905-1036)||(51487905-51488041)
chr1 (905-1036)||(26999821-26999957)
chr1 (905-1036)||(38843847-38843983)
chr1 (913-1036)||(7592743-7592871)
chr1 (917-989)||(42137140-42137213)
chr1 (905-1007)||(31099893-31099997)
chr1 (909-1007)||(35606880-35606980)
chr1 (905-1011)||(46408032-46408139)
chr1 (905-972)||(16342898-16342965)
chr1 (905-972)||(24076065-24076132)
chr1 (926-1007)||(27576697-27576780)
chr1 (905-1007)||(4484662-4484766)
chr1 (905-1007)||(6706683-6706787)
chr1 (905-1011)||(47655135-47655243)
chr1 (905-1007)||(50031394-50031498)
chr1 (905-972)||(50521047-50521114)
chr1 (909-965)||(7385827-7385883)
chr1 (905-972)||(1763299-1763366)
chr1 (905-972)||(11829611-11829678)
chr1 (905-972)||(45179926-45179993)
chr1 (909-972)||(44740697-44740760)
chr1 (919-1007)||(46033182-46033272)
chr1 (922-1011)||(11050575-11050667)
chr1 (905-972)||(41512745-41512811)
[»] scaffold0097 (1 HSPs)
scaffold0097 (905-1007)||(32499-32603)
[»] scaffold0184 (1 HSPs)
scaffold0184 (905-972)||(9212-9279)
[»] scaffold0068 (1 HSPs)
scaffold0068 (905-1007)||(38268-38372)
[»] scaffold0003 (1 HSPs)
scaffold0003 (919-972)||(301717-301770)
[»] scaffold0006 (1 HSPs)
scaffold0006 (917-1011)||(92098-92196)


Alignment Details
Target: chr5 (Bit Score: 359; Significance: 0; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 8 - 414
Target Start/End: Original strand, 14504929 - 14505338
Alignment:
Q  8 aattttgaagacaattgtggaattaatcaattgtcaataggtaaagagagcatgcgtgaaggctgaagggtggataagcctattgtgggaaagtgcctct 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14504929 aattttgaagacaattgtggaattaatcaattgtcaataggtaaagagtgcatgcgtgaaggctgaagggtggataagcctattgtgggaaagtgcctct 14505028  T
Q  108 atttaatgcatagttgtggaaattaattaaaggcaaaatttagatgcattttcttgtataactgcggaatatagacatgcatgttacagctgaataggtt 207  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14505029 atttaatgcatagttgtggaaattaattaaaggcaatatttagatgcattttcttgtataactgcggaatatggacatgcatgttacagctgaataggtt 14505128  T
Q  208 tccatatgcatgattgattgcacattttgtcagagaagaacgtgggtctttgtttattacaaatgatgaagg-aaatttcattgcattagtgttcacaac 306  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  14505129 tctatatgcatgattgattacacattttgtcagagaagaacgtgggtctttgtttattacaaatgatgaaggaaaatttcattgcattagtgttcacaat 14505228  T
Q  307 ctgatatgagatcactgaaacaaaaagaagcatcaaatgctataaacaaatattggattga--aggaacatatacactaaggaattaacatgtatattaa 404  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  14505229 ctgatatgagatcactgaaacaaaaagaagcatgaaatgctataaacaaatattggattgaataggaacatatgcactaaggaattaacatgtatattaa 14505328  T
Q  405 gaaggttaat 414  Q
    ||||||||||    
T  14505329 gaaggttaat 14505338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 514 - 711
Target Start/End: Original strand, 14506079 - 14506277
Alignment:
Q  514 ataaaaatatgatatcaaaattcgcttgcggttgatcttaattcaatgcgatgatttaccttaannnnnnngactccccggaattcccaacacaaattct 613  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||       ||||||||| |||||||||||||||||||    
T  14506079 ataaaaatatgatatcaaaattcgcttacggttgatcttaattcaatgcgatgatttacccaaatttttttgactccccgaaattcccaacacaaattct 14506178  T
Q  614 ttgactataagtaaaaatattattggactatcttttcatctatctagg-nnnnnnntaaatttgtttttattggtgataaaatatcagtgtatcactca 711  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  14506179 ttgactataagtaaaattattattggactatcttttcatctatctaggaaaataaataaatttgtttttattggtgataaaatatcagtgtatcactca 14506277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 14083160 - 14083024
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  14083160 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 14083061  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  14083060 catagttaaatacaaataaatagaaattactaaatta 14083024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 29541851 - 29541987
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  29541851 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 29541950  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  29541951 catagttaaatacaaataaatagaaattactaaatta 29541987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 3260367 - 3260503
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  3260367 tatgtttggatgcaataatacagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 3260466  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  3260467 catagttaaatacaaataaatagaaattactaaatta 3260503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 33115303 - 33115167
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  33115303 tatgtttggatacaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 33115204  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  33115203 catagttaaatacaaataaatagaaattactaaatta 33115167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 42664043 - 42663907
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||||    
T  42664043 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattatttttgaatgtataattaccaaaataga 42663944  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  42663943 catagttaaatacaaataaatagaaattactaaatta 42663907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 703 - 808
Target Start/End: Original strand, 14506349 - 14506445
Alignment:
Q  703 tatcactcatagatttgaagtcttagtcatatattccatcaaaattctgtcttctttcaattcattccatataaggtgttacacaagtggccttttcaac 802  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  14506349 tatctctcatagatttgaagtcttagtcatatattccatcaaaattctgtc---------ttcattccatataaggtgttacacaagtggccttttcaac 14506439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 27737994 - 27738098
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  27737994 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 27738093  T
Q  1003 catag 1007  Q
    |||||    
T  27738094 catag 27738098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 31906101 - 31905997
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  31906101 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 31906002  T
Q  1003 catag 1007  Q
    |||||    
T  31906001 catag 31905997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1011
Target Start/End: Original strand, 33082382 - 33082490
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| || |||||||| ||||||||||||| ||||||  |||||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  33082382 tatgtttgaatacaataatgtagaattgattaaatagaatggatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 33082481  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  33082482 catagttaa 33082490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 33386913 - 33387017
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||||  |||||| ||||| ||||| ||||| ||    
T  33386913 tatgtttggatacaataatgtagaattgattaaatagaatgaatgttgtttggatagttttgatcaaaattgtttttgaatgtataattactaaaatgga 33387012  T
Q  1003 catag 1007  Q
    |||||    
T  33387013 catag 33387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 10900796 - 10900692
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||| |||||||| |||||| |||||| ||||| ||||| ||||| ||    
T  10900796 tatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggataattttgatcaaaattaattttgaatgtataattactaaaatgga 10900697  T
Q  1003 catag 1007  Q
    |||||    
T  10900696 catag 10900692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 37046226 - 37046122
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| || |||||||||||||||||||||||| | ||| ||||||||||||  |||||||| ||||| ||||||| ||||| ||||| ||||||||    
T  37046226 tatgtttgaatacaataatgcagaattgattaaacaaactgaatgttgtttggatgattttgatcaaaattgcttttgaatgtataattactaaaataga 37046127  T
Q  1003 catag 1007  Q
    |||||    
T  37046126 catag 37046122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 41741657 - 41741761
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga-tcaaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| | | ||||| ||||||| ||||| ||||| ||||| ||    
T  41741657 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttattaaaattgcttttgaatgtataattactaaaatgga 41741756  T
Q  1003 catag 1007  Q
    |||||    
T  41741757 catag 41741761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 926 - 1006
Target Start/End: Complemental strand, 2526947 - 2526865
Alignment:
Q  926 agaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacata 1006  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| || |||| ||||| ||||| ||||||||||||    
T  2526947 agaattgattaaacagaatgaatgttgtttggatagttttgatcaaaattgctcttgaatgtataattactaaaatagacata 2526865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 917 - 1007
Target Start/End: Original strand, 8957949 - 8958041
Alignment:
Q  917 caataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacatag 1007  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| |||||||| ||||    
T  8957949 caataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatagatatag 8958041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1011
Target Start/End: Original strand, 25256274 - 25256382
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| |||||||||||||| ||||   |||||||| ||||||||||||| |||||  |||||| ||||| ||||| ||||| ||    
T  25256274 tatgtttggatacaataatgtagaattgattaaacggaattgatgttgtttagatagttttgatcaaaattgtttttgaatgtataattactaaaatgga 25256373  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  25256374 catagttaa 25256382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1011
Target Start/End: Original strand, 25320063 - 25320171
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| |||||||||||||| ||||   |||||||| ||||||||||||| |||||  |||||| ||||| ||||| ||||| ||    
T  25320063 tatgtttggatacaataatgtagaattgattaaacggaattgatgttgtttagatagttttgatcaaaattgtttttgaatgtataattactaaaatgga 25320162  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  25320163 catagttaa 25320171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 33233108 - 33233005
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  33233108 tatgtttggatacaataatgcagaatcgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatgga 33233010  T
Q  1003 catag 1007  Q
    |||||    
T  33233009 catag 33233005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 965
Target Start/End: Original strand, 41039587 - 41039647
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 965  Q
    ||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  41039587 tatgtttggatacaataatgcagaattgattaaacgaaatgaatgttgtttggatagtttt 41039647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 7071459 - 7071565
Alignment:
Q  905 tatgtttggatgcaataatgc--agaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaata 1000  Q
    ||||||||||| |||||||||  | ||||||||||||| | ||| |||||||||||||||||||||| |||||  |||||| ||||| |||||||||||     
T  7071459 tatgtttggatacaataatgcgcataattgattaaacaaactgaatgttgtttggatagttttgatcaaaattgtttttgaatgtataattaccaaaatg 7071558  T
Q  1001 gacatag 1007  Q
    |||||||    
T  7071559 gacatag 7071565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1011
Target Start/End: Original strand, 11017870 - 11017978
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||||||  ||||||||||||||||||| ||| | ||| |||||||||||||||||| ||| |||||  |||||| |||||  |||| ||||| ||    
T  11017870 tatgtttggatataataatgcagaattgattagacaaactgaatgttgtttggatagttttcatcaaaattgtttttgaatgtatggttactaaaatgga 11017969  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  11017970 catagttaa 11017978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 965
Target Start/End: Complemental strand, 19357126 - 19357066
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 965  Q
    ||||||||||| |||||||||||||||||||||||| | ||| ||||||||| ||||||||    
T  19357126 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttgtatagtttt 19357066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 40980079 - 40979975
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||| ||||| |||||||||| ||||||||||||| | | | |||||||||||||||||||||| |||||  |||||| ||||| ||||| ||||| ||    
T  40980079 tatgtatggatacaataatgcaaaattgattaaacaaattaaatgttgtttggatagttttgatcaaaattgattttgaatgtataattactaaaatgga 40979980  T
Q  1003 catag 1007  Q
    |||||    
T  40979979 catag 40979975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 909 - 972
Target Start/End: Original strand, 20069125 - 20069188
Alignment:
Q  909 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||| |||||||||| |||||||||||||   ||| |||||||||||||||||||||||||    
T  20069125 tttggatacaataatgcaaaattgattaaacacgttgaatgttgtttggatagttttgatcaaa 20069188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 39236066 - 39236169
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaattacttttgattgtat-attaccaaaatagac 1003  Q
    |||||||| ||  ||||||||||||||||||||||| | ||| ||||||||||||| ||||  | ||||| ||||||| ||||| ||||| ||||| |||    
T  39236066 tatgtttgaatataataatgcagaattgattaaacaaactgaatgttgtttggataattttattaaaattgcttttgaatgtataattactaaaatggac 39236165  T
Q  1004 atag 1007  Q
    ||||    
T  39236166 atag 39236169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 14506043 - 14506080
Alignment:
Q  411 taatatgttaaatgtgagttagaaattgaatatttgat 448  Q
    |||| |||||||||||||||||||||||||||||||||    
T  14506043 taatgtgttaaatgtgagttagaaattgaatatttgat 14506080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 4295594 - 4295486
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| || |||||||  | ||||||||||||| | ||| |||||||||||||  ||||||| |||||| |||||| ||||| ||||| ||||| ||    
T  4295594 tatgtttgaatacaataatttaaaattgattaaacaaattgaatgttgtttggatatgtttgatcaaaattatttttgaatgtataattactaaaatgga 4295495  T
Q  1003 catagttaa 1011  Q
    || ||||||    
T  4295494 cagagttaa 4295486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 3e-45; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 194052 - 193916
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  194052 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 193953  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  193952 catagttaaatacaaataaatagaaattactaaatta 193916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 721656 - 721520
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  721656 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 721557  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  721556 catagttaaatacaaataaatagaaattactaaatta 721520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 882763 - 882627
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  882763 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 882664  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  882663 catagttaaatacaaataaatagaaattactaaatta 882627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 30211250 - 30211114
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  30211250 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 30211151  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  30211150 catagttaaatacaaataaatagaaattactaaatta 30211114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 629380 - 629244
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  629380 tatgtttgaatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 629281  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  629280 catagttaaatacaaataaatagaaattactaaatta 629244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 30982640 - 30982776
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  30982640 tatgtttggatgcaataatgcagaattaattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 30982739  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  30982740 catagttaaatacaaataaatagaaattactaaatta 30982776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 34773859 - 34773995
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  34773859 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 34773958  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   ||||||||| |||||||||    
T  34773959 catagttaaatacaaataaatagaaatgactaaatta 34773995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 924693 - 924585
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||||||||||||||||| ||||||||||||| | ||| | |||||| ||||||||||||| ||||||||||||| ||||| ||||| ||||| ||    
T  924693 tatgtttggatgcaataatgcataattgattaaacaaactgaatattgtttagatagttttgatcaaaattacttttgaatgtataattactaaaatgga 924594  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  924593 catagttaa 924585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1011
Target Start/End: Original strand, 35801746 - 35801854
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||| ||| |||||  |||||| ||||| ||||| ||||| ||    
T  35801746 tatgtttgaatacaataatgcagaattgattaaacaaaatgaatgttgtttggatagtttttatcaaaattgtttttgaatgtataattactaaaatgga 35801845  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  35801846 catagttaa 35801854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 928 - 1011
Target Start/End: Complemental strand, 13016316 - 13016231
Alignment:
Q  928 aattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacatagttaa 1011  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| ||||| ||||| ||||| |||||||||||    
T  13016316 aattgattaaacagaatgaatgttgttttaatagttttgatcaaaattacttttgaatgtataattactaaaatggacatagttaa 13016231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 8417322 - 8417218
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgta-tattaccaaaataga 1002  Q
    |||||||||||  ||||||||||||||||||||||| | ||| |||||||| ||||||||| ||| ||||||||||||| ||||  ||||| ||||| ||    
T  8417322 tatgtttggatataataatgcagaattgattaaacaaattgaatgttgtttagatagttttaatcaaaattacttttgaatgtagaattactaaaatgga 8417223  T
Q  1003 catag 1007  Q
    |||||    
T  8417222 catag 8417218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 965
Target Start/End: Complemental strand, 44240773 - 44240713
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 965  Q
    ||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  44240773 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt 44240713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 965
Target Start/End: Complemental strand, 2026176 - 2026116
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 965  Q
    ||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  2026176 tatgttttgatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt 2026116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 26575890 - 26575786
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||  ||||||||||| | |||| |  |||||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  26575890 tatgtttggatacaataatatagaattgattagatagaagggatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 26575791  T
Q  1003 catag 1007  Q
    |||||    
T  26575790 catag 26575786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 45275832 - 45275936
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||| |||||| ||||||||||||| | ||| |||| ||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  45275832 tatgtttggatacaacaatgcaaaattgattaaacaaactgaatgttatttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 45275931  T
Q  1003 catag 1007  Q
    |||||    
T  45275932 catag 45275936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 17073665 - 17073732
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||||||||||||||||| |   | |||||||||||||||||| ||||||    
T  17073665 tatgtttggatacaataatgcagaattgattaaacaaacataatgttgtttggatagtttttatcaaa 17073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 17574605 - 17574538
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||||||||||||||||| |   | |||||||||||||||||| ||||||    
T  17574605 tatgtttggatacaataatgcagaattgattaaacaaacataatgttgtttggatagtttttatcaaa 17574538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 917 - 982
Target Start/End: Complemental strand, 2598584 - 2598518
Alignment:
Q  917 caataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttga 982  Q
    ||||||||| |||||||||||||| |||||  ||||||| ||||||||||||| |||||||||||||    
T  2598584 caataatgctgaattgattaaacaaaatgaacgttgttttgatagttttgatcaaaattacttttga 2598518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 908 - 972
Target Start/End: Original strand, 23018301 - 23018365
Alignment:
Q  908 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    |||||||| |||||||| | ||||||||||||| | ||| ||||||||| |||||||||||||||    
T  23018301 gtttggatacaataatgtaaaattgattaaacacattgagtgttgtttgaatagttttgatcaaa 23018365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 905 - 1006
Target Start/End: Original strand, 36821058 - 36821159
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||||||||||||||||||   ||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  36821058 tatgtttggatacaataatgcagaattgat--gacaaactgaatgttgtttggatagttttcatcgaaattgcttttgaatgtataattactaaaatgga 36821155  T
Q  1003 cata 1006  Q
    ||||    
T  36821156 cata 36821159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 962
Target Start/End: Complemental strand, 11071139 - 11071082
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagt 962  Q
    ||||||||||| ||||||| |||||||||||||| | | ||| |||||||||||||||    
T  11071139 tatgtttggatacaataatacagaattgattaaataaattgaatgttgtttggatagt 11071082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 23141823 - 23141766
Alignment:
Q  454 gtagatgttaagaaacatataaatgagatgacttatatatctaatatttaaagatttt 511  Q
    ||||||||| ||||||||||||||||||||||| || |||||||| | | ||||||||    
T  23141823 gtagatgttgagaaacatataaatgagatgactcatgtatctaatgtcttaagatttt 23141766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 804 - 836
Target Start/End: Complemental strand, 194153 - 194121
Alignment:
Q  804 cactacgtgtgtgtttggttctgaggtgtgtag 836  Q
    |||||||||||||||||||||||||||||||||    
T  194153 cactacgtgtgtgtttggttctgaggtgtgtag 194121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 804 - 836
Target Start/End: Complemental strand, 308990 - 308958
Alignment:
Q  804 cactacgtgtgtgtttggttctgaggtgtgtag 836  Q
    |||||||||||||||||||||||||||||||||    
T  308990 cactacgtgtgtgtttggttctgaggtgtgtag 308958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 3e-45; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 31012026 - 31012162
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  31012026 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 31012125  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  31012126 catagttaaatacaaataaatagaaattactaaatta 31012162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 25341007 - 25341143
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  25341007 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 25341106  T
Q  1003 catagtt-aatac-aataa-tagaaattactaaatta 1036  Q
    ||||||| ||||| ||||| |||||||||||||||||    
T  25341107 catagttaaatacaaataactagaaattactaaatta 25341143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 26827035 - 26826931
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  26827035 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 26826936  T
Q  1003 catag 1007  Q
    |||||    
T  26826935 catag 26826931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 25191294 - 25191361
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  25191294 tatgtttggatacaataatgtagaattgattaaacaaaatgaatgttgtttggatagttttgatcaaa 25191361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 4036002 - 4035898
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| ||||||||||||||| | | | |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||||||    
T  4036002 tatgtttggatacaataatgtagaattgattaaacaaactaaatgttgtttggatagttttaatcaaaattgcttttgaatgtataattactaaaataga 4035903  T
Q  1003 catag 1007  Q
    |||||    
T  4035902 catag 4035898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 37371327 - 37371260
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||    
T  37371327 tatgtttggatacaataatgcagaattgattaaacaaagtgaatgttgtttggatagtttttatcaaa 37371260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 907 - 1012
Target Start/End: Complemental strand, 30825816 - 30825710
Alignment:
Q  907 tgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtatattaccaaaatagacat 1005  Q
    ||||||||| ||||||||||||||||||||||||   ||| |||| |||||||| |||| ||| ||||| ||||||| |||||| ||| |||||||||||    
T  30825816 tgtttggatacaataatgcagaattgattaaacaatctgaatgttatttggataatttttatcaaaattgcttttgaatgtataatactaaaatagacat 30825717  T
Q  1006 agttaat 1012  Q
    || ||||    
T  30825716 agctaat 30825710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 905 - 1009
Target Start/End: Original strand, 47085274 - 47085380
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||| ||| ||   ||||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  47085274 tatgtttggatacaataatgcaaaattgattaaatagagtggaggttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 47085373  T
Q  1003 catagtt 1009  Q
    |||||||    
T  47085374 catagtt 47085380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 298101 - 298205
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||| ||||  |||||||||||||||||||  |||||||| ||||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  298101 tatgtttggatacaaaaatgtggaattgattaaacagaatggatgttgtttagatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 298200  T
Q  1003 catag 1007  Q
    |||||    
T  298201 catag 298205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 12910577 - 12910474
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||||||  ||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  12910577 tatgtttggatataataatgcagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatgga 12910479  T
Q  1003 catag 1007  Q
    |||||    
T  12910478 catag 12910474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 39857636 - 39857532
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||| | ||||| ||||||||| ||||| ||| |||||||||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  39857636 tatgtttggatacaataacgtagaatcgattaaacaaaatgaatgtcgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 39857537  T
Q  1003 catag 1007  Q
    |||||    
T  39857536 catag 39857532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 40233960 - 40233852
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||| ||| |||||| | | |||||||||||| |||||| |||||||||||||||||||||| |||||| |||||| ||||| |||||  |||| ||    
T  40233960 tatgtttagatacaataacgtataattgattaaacggaatgaatgttgtttggatagttttgatcaaaattatttttgaatgtatgattacttaaatgga 40233861  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  40233860 catagttaa 40233852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 41065423 - 41065319
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| || | |||| | ||||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  41065423 tatgtttgaatacgataacgtagaattgattaaagagaatgaatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 41065324  T
Q  1003 catag 1007  Q
    |||||    
T  41065323 catag 41065319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 25472205 - 25472272
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||| ||||||    
T  25472205 tatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggatagtttttatcaaa 25472272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 45203171 - 45203104
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||| ||| |||||||||||||||||||||||  | ||| |||||||||||||||||||||||||    
T  45203171 tatgtttagatacaataatgcagaattgattaaaccaattgaatgttgtttggatagttttgatcaaa 45203104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 917 - 1007
Target Start/End: Original strand, 1999670 - 1999762
Alignment:
Q  917 caataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa-ttacttttgattgtat-attaccaaaatagacatag 1007  Q
    |||||||| ||||||||||||| ||||| | ||||||||| ||||||||||||||| || ||||||| ||||| ||||| ||||| |||||||    
T  1999670 caataatgtagaattgattaaatagaataaatgttgtttgaatagttttgatcaaacttgcttttgaatgtataattactaaaatggacatag 1999762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 15000536 - 15000432
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| ||  ||||||||||||||||||||||| | ||| |||||||||||||||||| | | ||||| ||||||| ||||| ||||| ||| ||||    
T  15000536 tatgtttgaataaaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttaacaaaattgcttttgaatgtataattactaaactaga 15000437  T
Q  1003 catag 1007  Q
    |||||    
T  15000436 catag 15000432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 26827196 - 26827300
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgta-tattaccaaaataga 1002  Q
    ||||||||||| ||||| |||||||||||||||||| | |||  ||||||||||||||||| ||| ||||| ||||||| ||||  ||||| ||||| ||    
T  26827196 tatgtttggatacaatattgcagaattgattaaacaaattgaaagttgtttggatagtttttatcaaaattgcttttgaatgtacaattactaaaatgga 26827295  T
Q  1003 catag 1007  Q
    |||||    
T  26827296 catag 26827300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 32451418 - 32451310
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||| ||| |||||||| | ||||||||||||| ||||| ||||||||  |||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  32451418 tatgtttcgatacaataatgtaaaattgattaaacataatgaatgttgtttaaatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 32451319  T
Q  1003 catagttaa 1011  Q
    ||| |||||    
T  32451318 catggttaa 32451310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 43664280 - 43664384
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||| ||||||| | ||| | || ||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  43664280 tatgtttggatacaataatgcagaattgtttaaacaaactgaatattatttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 43664379  T
Q  1003 catag 1007  Q
    |||||    
T  43664380 catag 43664384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 39957939 - 39958006
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||| ||||||||||||||| | | | ||| |||||||||||||||||||||    
T  39957939 tatgtttggatacaataatgtagaattgattaaacaaactaaatgtcgtttggatagttttgatcaaa 39958006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 30139262 - 30139366
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||||||| || ||||||||||||| | ||| ||| ||| |||||||||| ||| |||||  |||||| ||||| ||||| ||||| ||    
T  30139262 tatgtttggatacaataattcataattgattaaacaaactgaatgtcgttcggatagtttttatcaaaattgattttgaatgtataattactaaaatgga 30139361  T
Q  1003 catag 1007  Q
    |||||    
T  30139362 catag 30139366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 3e-45; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 30019886 - 30019750
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  30019886 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 30019787  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  30019786 catagttaaatacaaataaatagaaattactaaatta 30019750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 926 - 1006
Target Start/End: Complemental strand, 4147473 - 4147391
Alignment:
Q  926 agaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacata 1006  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| || |||| ||||| ||||| ||||||||||||    
T  4147473 agaattgattaaacagaatgaatgttgtttggatagttttgatcaaaattgctcttgaatgtataattactaaaatagacata 4147391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 905 - 989
Target Start/End: Original strand, 21515135 - 21515219
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||||    
T  21515135 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgcttttgaatgtata 21515219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 913 - 1007
Target Start/End: Complemental strand, 10683823 - 10683727
Alignment:
Q  913 gatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacatag 1007  Q
    ||||||||||||||||||| |||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| |||||||    
T  10683823 gatgcaataatgcagaattaattaaacaaactgaatgttgtttggatagtttttatcaaaatttcttttgaatgtataattactaaaatggacatag 10683727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 31745444 - 31745548
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| | |||| | | ||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  31745444 tatgtttggatacgataacgtataattgattaaacagaataaatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 31745543  T
Q  1003 catag 1007  Q
    |||||    
T  31745544 catag 31745548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 905 - 989
Target Start/End: Complemental strand, 27825661 - 27825576
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    ||||||||||  | |||||  ||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| | ||||||    
T  27825661 tatgtttggacacgataatatagaattgattaaatagaatgaatgttgtttggatagttttgatcaaaattacttttaaatgtata 27825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 905 - 989
Target Start/End: Complemental strand, 921712 - 921628
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    ||||||||||| |||||| | || |||||||||||||||||  |||||||||||||| ||||||| |||||| |||||| ||||||    
T  921712 tatgtttggatacaataaagtaggattgattaaacagaatggatgttgtttggatag-tttgatcaaaattatttttgaatgtata 921628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Original strand, 1599741 - 1599798
Alignment:
Q  454 gtagatgttaagaaacatataaatgagatgacttatatatctaatatttaaagatttt 511  Q
    ||||||||| |||||||||||| |||||||||| || |||||||| | | ||||||||    
T  1599741 gtagatgttgagaaacatataagtgagatgactcatgtatctaatgtcttaagatttt 1599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 3e-45; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 24035631 - 24035767
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  24035631 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 24035730  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  24035731 catagttaaatacaaataaatagaaattactaaatta 24035767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 24247213 - 24247077
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  24247213 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 24247114  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  24247113 catagttaaatacaaataaatagaaattactaaatta 24247077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 39382449 - 39382585
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  39382449 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 39382548  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  39382549 catagttaaatacaaataaatagaaattactaaatta 39382585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 49128324 - 49128188
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  49128324 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 49128225  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  49128224 catagttaaatacaaataaatagaaattactaaatta 49128188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 16202572 - 16202676
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| ||||||||||||| | ||||| |||||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  16202572 tatgtttggatacaataatgtagaattgattaaatataatgaatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatgga 16202671  T
Q  1003 catag 1007  Q
    |||||    
T  16202672 catag 16202676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 905 - 1006
Target Start/End: Complemental strand, 26459646 - 26459543
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||  |||| ||||| ||||| ||    
T  26459646 tatgtttggatacaataatgcaaaattgattaaacaaattgaatgttgtttggatagttttgatcaaaattacttttgaaagtataattactaaaatgga 26459547  T
Q  1003 cata 1006  Q
    ||||    
T  26459546 cata 26459543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 905 - 1006
Target Start/End: Original strand, 30417834 - 30417937
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||| ||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||||||    
T  30417834 tatgtttagatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaataga 30417933  T
Q  1003 cata 1006  Q
    ||||    
T  30417934 cata 30417937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 50523308 - 50523375
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  50523308 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttgatcaaa 50523375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 905 - 989
Target Start/End: Complemental strand, 39733479 - 39733394
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    ||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||||||| |||||| |||||| ||||||    
T  39733479 tatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggatagttttgatcaaaattaattttgaatgtata 39733394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 48407572 - 48407505
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||    
T  48407572 tatgtttggatacaataatgcagaattgattaaacaaaatgaatgttgtttggataatttttatcaaa 48407505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 22605798 - 22605900
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||||||||||| |||||||||||  ||||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  22605798 tatgtttggatacaataatgcagtattgattaaac--aatgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaattga 22605895  T
Q  1003 catag 1007  Q
    |||||    
T  22605896 catag 22605900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 28912271 - 28912166
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaattacttttgattgtat-attaccaaaatagac 1003  Q
    ||||||||||| ||||||||  ||||||||||||  |||||| |||||||| |||| ||||||||||||| ||||||| ||||| ||||| ||||| |||    
T  28912271 tatgtttggatacaataatgtggaattgattaaa--gaatgaatgttgtttagataattttgatcaaattgcttttgaatgtataattactaaaatggac 28912174  T
Q  1004 atagttaa 1011  Q
    ||| ||||    
T  28912173 ataattaa 28912166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 28963297 - 28963401
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||| ||| |||||||||| ||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  28963297 tatgtttagatacaataatgcaaaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 28963396  T
Q  1003 catag 1007  Q
    |||||    
T  28963397 catag 28963401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 29385485 - 29385589
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||| |||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  29385485 tatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggataatttttatcaaaattgcttttgaatgtataattactaaaatgga 29385584  T
Q  1003 catag 1007  Q
    |||||    
T  29385585 catag 29385589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 45106440 - 45106336
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||| ||| |||||  |||||| ||||| ||||  ||||||||    
T  45106440 tatgtttggatacaataatgcaaaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgattttgaatgtataattaataaaataga 45106341  T
Q  1003 catag 1007  Q
    |||||    
T  45106340 catag 45106336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 51833498 - 51833602
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| || | |||| | ||||||||||||||||||||| |||||||||||||||||||| | ||||| ||||||| ||||| ||||| ||||| ||    
T  51833498 tatgtttgaatacgataacgtagaattgattaaacagaatgaatgttgtttggatagttttgaacaaaattgcttttgaatgtataattactaaaatgga 51833597  T
Q  1003 catag 1007  Q
    |||||    
T  51833598 catag 51833602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 905 - 1006
Target Start/End: Original strand, 53663074 - 53663177
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||| | | |||||  |||||| ||||| ||||| ||||||||    
T  53663074 tatgtttggatacaataatgcaaaattgattaaacaaactgaatgttgtttggatagtttttaacaaaattgtttttgaatgtataattactaaaataga 53663173  T
Q  1003 cata 1006  Q
    ||||    
T  53663174 cata 53663177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 56561149 - 56561046
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||| ||||||||||||||||| | ||| ||||| |||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  56561149 tatgtttggatacaataacgcagaattgattaaacaaactgaatgttggttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatgga 56561051  T
Q  1003 catag 1007  Q
    |||||    
T  56561050 catag 56561046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 905 - 989
Target Start/End: Complemental strand, 36212882 - 36212797
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga-tcaaattacttttgattgtata 989  Q
    |||||||||||||||||||||| | ||||||||| | ||||  |||||||| ||||||||||| | |||| |||||||| ||||||    
T  36212882 tatgtttggatgcaataatgcatatttgattaaataaaatgtatgttgtttagatagttttgattaaaatcacttttgaatgtata 36212797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 917 - 1011
Target Start/End: Original strand, 5937367 - 5937463
Alignment:
Q  917 caataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacatagttaa 1011  Q
    |||||||||||||||||||||||| | ||| ||||||||| ||| |||||||| |||||  |||||| ||||| ||||| ||||  |||||||||||    
T  5937367 caataatgcagaattgattaaacaaactgaatgttgtttgaatatttttgatcaaaattgattttgaatgtataattactaaaacggacatagttaa 5937463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 905 - 1011
Target Start/End: Original strand, 53403565 - 53403673
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||||| | ||| |||| |||||||| |||| ||| |||||  |||||| ||||| ||||| ||||| ||    
T  53403565 tatgtttggatacaataatgcataattgattaaacaaactgaatgttatttggataatttttatcaaaattgattttgaatgtataattactaaaatgga 53403664  T
Q  1003 catagttaa 1011  Q
    ||| |||||    
T  53403665 catggttaa 53403673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 905 - 960
Target Start/End: Complemental strand, 38768458 - 38768403
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggata 960  Q
    ||||| ||||| ||||| |||||||||||||||||| ||||| |||||||||||||    
T  38768458 tatgtctggatacaatactgcagaattgattaaacaaaatgaatgttgtttggata 38768403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 454 - 498
Target Start/End: Original strand, 13228751 - 13228795
Alignment:
Q  454 gtagatgttaagaaacatataaatgagatgacttatatatctaat 498  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||    
T  13228751 gtagatgttgagaaacatataagtgagatgactcatatatctaat 13228795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 8510804 - 8510737
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||| ||||||| ||| ||||| | |||||||||  || |||||||||||    
T  8510804 tatgtttggatacaataatgcataattgataaaatagaataaatgttgtttgattaattttgatcaaa 8510737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 968
Target Start/End: Original strand, 29810030 - 29810092
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgat 968  Q
    |||||||||||  ||||||||| ||| |||||||| |||||| |||| ||||||||||||||||    
T  29810030 tatgtttggataaaataatgcaaaat-gattaaaccgaatgaatgttttttggatagttttgat 29810092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 3e-45; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 1528174 - 1528038
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  1528174 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 1528075  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  1528074 catagttaaatacaaataaatagaaattactaaatta 1528038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 47140780 - 47140916
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  47140780 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 47140879  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  47140880 catagttaaatacaaataaatagaaattactaaatta 47140916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 51124800 - 51124936
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  51124800 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 51124899  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  51124900 catagttaaatacaaataaatagaaattactaaatta 51124936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 38469849 - 38469713
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  38469849 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 38469750  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||| ||   |||||||||||||||||||    
T  38469749 catagttaaataaaaataaatagaaattactaaatta 38469713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1032
Target Start/End: Complemental strand, 47697358 - 47697226
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  47697358 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 47697259  T
Q  1003 catagtt-aatacaa--taatagaaattactaa 1032  Q
    ||||||| |||||||   |||||||||||||||    
T  47697258 catagttaaatacaaataaatagaaattactaa 47697226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 52693208 - 52693072
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  52693208 tatgtttggatgcaataatacagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 52693109  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  52693108 catagttaaatacaaataaatagaaattactaaatta 52693072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 909 - 1011
Target Start/End: Complemental strand, 39252140 - 39252036
Alignment:
Q  909 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacata 1006  Q
    ||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||||||    
T  39252140 tttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacata 39252041  T
Q  1007 gttaa 1011  Q
    |||||    
T  39252040 gttaa 39252036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 48181728 - 48181624
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||||||||||| | ||| |||||| |||| ||    
T  48181728 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattacttttgaatatataattaccgaaatgga 48181629  T
Q  1003 catag 1007  Q
    |||||    
T  48181628 catag 48181624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 905 - 989
Target Start/End: Complemental strand, 11264360 - 11264275
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    ||||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||| ||||||| ||||||    
T  11264360 tatgtttggatacaaaaatgcagaattgattaaacaaaatgaatgttgtttggatagtttttatcaaaattgcttttgaatgtata 11264275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 28884341 - 28884233
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| | ||||||||||| ||||||| |||||||||||||||||| ||| |||||| |||||| ||||| |||||  |||| ||    
T  28884341 tatgtttggatacaataatgtataattgattaaagagaatgaatgttgtttggatagttttaatcaaaattatttttgaatgtataattactgaaatgga 28884242  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  28884241 catagttaa 28884233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 30811371 - 30811267
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||||||| |||||||||||||||| | ||| |||||||||||||||||||||| |||||  |||||| ||||| ||||| ||||| ||    
T  30811371 tatgtttggatacaataattcagaattgattaaacaaactgaatgttgtttggatagttttgatcaaaattgattttgaatgtataattactaaaatgga 30811272  T
Q  1003 catag 1007  Q
    |||||    
T  30811271 catag 30811267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 33025219 - 33025323
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| |||||  |||||| | ||| ||||| ||||||||    
T  33025219 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgtttttgaatctataattactaaaataga 33025318  T
Q  1003 catag 1007  Q
    |||||    
T  33025319 catag 33025323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 33329395 - 33329499
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| ||||||||||||||| ||||  ||||||||||||||||| |||| ||||| ||||||| ||||| ||||| ||||| ||    
T  33329395 tatgtttggatacaataatgtagaattgattaaacaaaatggatgttgtttggatagtttcgatcaaaattgcttttgaatgtataattactaaaatgga 33329494  T
Q  1003 catag 1007  Q
    |||||    
T  33329495 catag 33329499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 905 - 1006
Target Start/End: Complemental strand, 44329298 - 44329195
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||| || | |||||| | ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||| ||    
T  44329298 tatgtttgtatacgataatgtaaaattgattaaatagaatgaatgttgtttggatagttttgatcaaaattacttttgaatgtataattactaaaattga 44329199  T
Q  1003 cata 1006  Q
    ||||    
T  44329198 cata 44329195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 965
Target Start/End: Complemental strand, 42275199 - 42275139
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 965  Q
    ||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  42275199 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt 42275139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 48253932 - 48254036
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||| ||| |||||||||| ||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  48253932 tatgtttagatacaataatgcaaaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 48254031  T
Q  1003 catag 1007  Q
    |||||    
T  48254032 catag 48254036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 905 - 974
Target Start/End: Complemental strand, 51230367 - 51230298
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaatt 974  Q
    |||||||| || |||||||||| ||||||||||||| | ||| |||||||||||||||||| ||||||||    
T  51230367 tatgtttgaatacaataatgcaaaattgattaaacaaactgaatgttgtttggatagtttttatcaaatt 51230298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 42074997 - 42074889
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||||| |||| ||||||||||||| | ||| |||||||||||||||| | ||| |||||  |||||| ||||| ||||| ||||||||    
T  42074997 tatgtttggatacaatagtgcataattgattaaacaaactgaatgttgtttggatagttcttatcaaaattgattttgaatgtataattactaaaataga 42074898  T
Q  1003 catagttaa 1011  Q
     ||||||||    
T  42074897 gatagttaa 42074889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 965
Target Start/End: Complemental strand, 45151275 - 45151215
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 965  Q
    ||||||||||| |||||||| ||||||||||||||| ||| | ||||||||||||||||||    
T  45151275 tatgtttggatacaataatgtagaattgattaaacaaaataaatgttgtttggatagtttt 45151215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 987
Target Start/End: Original strand, 5104739 - 5104822
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgta 987  Q
    |||||||||||  ||||||| ||| ||||||||||| ||||| ||||||||| ||| |||||||| ||||||||||||| ||||    
T  5104739 tatgtttggatataataatgtagatttgattaaacaaaatgaatgttgtttgaataattttgatcaaaattacttttgaatgta 5104822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 50392256 - 50392323
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||| ||||||||||||||| | ||| | ||||||||||| |||||||||||    
T  50392256 tatgtttggatacaataatgtagaattgattaaacaaattgaatattgtttggataattttgatcaaa 50392323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 44610270 - 44610373
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| | |||||||||||| |||||  |||||||||||||| ||||||| |||||  |||||| ||||| ||||| ||||| ||    
T  44610270 tatgtttggatacaataatgtaaaattgattaaacggaatggatgttgtttggatag-tttgatcaaaattgattttgaatgtataattactaaaatgga 44610368  T
Q  1003 catag 1007  Q
    |||||    
T  44610369 catag 44610373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 39267096 - 39267200
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| ||||| || | ||||||||||||| | | | |||||||| ||||||||||||| ||| | ||||||| ||||| ||||| ||||| ||    
T  39267096 tatgtttggatacaatagtgtataattgattaaacaaactaaatgttgttttgatagttttgatcaaaactgcttttgaatgtataattactaaaatgga 39267195  T
Q  1003 catag 1007  Q
    |||||    
T  39267196 catag 39267200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 905 - 989
Target Start/End: Complemental strand, 40237919 - 40237834
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    |||||||| || |||||| | ||||||||||||  || |||| ||||||||| |||||||| ||| ||||| ||||||| ||||||    
T  40237919 tatgtttgaatacaataacgtagaattgattaattaggatgaatgttgtttgaatagtttttatcaaaattgcttttgaatgtata 40237834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 907 - 972
Target Start/End: Complemental strand, 41536436 - 41536371
Alignment:
Q  907 tgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||| ||| |||||||| ||||||||||||||  | | | |||||||||||| ||||||||||||    
T  41536436 tgtttagatacaataatgtagaattgattaaacgaactaaatgttgtttggatggttttgatcaaa 41536371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 50331986 - 50331929
Alignment:
Q  454 gtagatgttaagaaacatataaatgagatgacttatatatctaatatttaaagatttt 511  Q
    ||||||||| |||||||||||| |||||||||| || |||||||| | | ||||||||    
T  50331986 gtagatgttgagaaacatataagtgagatgactcatgtatctaatgtcttaagatttt 50331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 948 - 1007
Target Start/End: Original strand, 53686564 - 53686625
Alignment:
Q  948 tgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacatag 1007  Q
    |||||||||||||||||| ||| ||||||||||||| | ||| ||||| |||||||||||||    
T  53686564 tgttgtttggatagtttttatcaaaattacttttgaatatataattactaaaatagacatag 53686625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 3e-45; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 14380773 - 14380637
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  14380773 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 14380674  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  14380673 catagttaaatacaaataaatagaaattactaaatta 14380637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 31686350 - 31686486
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  31686350 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 31686449  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  31686450 catagttaaatacaaataaatagaaattactaaatta 31686486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 31787316 - 31787180
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  31787316 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 31787217  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  31787216 catagttaaatacaaataaatagaaattactaaatta 31787180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 40255176 - 40255040
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  40255176 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 40255077  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  40255076 catagttaaatacaaataaatagaaattactaaatta 40255040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 44282841 - 44282705
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  44282841 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 44282742  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  44282741 catagttaaatacaaataaatagaaattactaaatta 44282705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 7474196 - 7474092
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  7474196 tatgtttggatacaataatgcagaattgattaaacaaaatgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 7474097  T
Q  1003 catag 1007  Q
    |||||    
T  7474096 catag 7474092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 17481457 - 17481349
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| | ||| ||||| ||    
T  17481457 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataagtactaaaatgga 17481358  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  17481357 catagttaa 17481349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 43341705 - 43341809
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | | | |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  43341705 tatgtttggatacaataatgcagaattgattaaacaaactaaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 43341804  T
Q  1003 catag 1007  Q
    |||||    
T  43341805 catag 43341809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 13896647 - 13896544
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  13896647 tatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatgga 13896549  T
Q  1003 catag 1007  Q
    |||||    
T  13896548 catag 13896544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 14037264 - 14037161
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  14037264 tatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatgga 14037166  T
Q  1003 catag 1007  Q
    |||||    
T  14037165 catag 14037161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 35457615 - 35457719
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga-tcaaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||| ||||||| | ||| |||||||||||||||||| | | ||||| ||||||| ||||| ||||| ||||| ||    
T  35457615 tatgtttggatacaataatgcagaattgtttaaacaaactgaatgttgtttggatagtttttattaaaattgcttttgaatgtataattactaaaatgga 35457714  T
Q  1003 catag 1007  Q
    |||||    
T  35457715 catag 35457719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 37640192 - 37640296
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||||| |||||  ||||||||||||||||| ||| |||||  |||||| ||||| ||||| ||||| ||    
T  37640192 tatgtttggatacaataatgcataattgattaaacaaaatgaacgttgtttggatagtttttatcaaaattgattttgaatgtataattactaaaatgga 37640291  T
Q  1003 catag 1007  Q
    |||||    
T  37640292 catag 37640296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 905 - 989
Target Start/End: Original strand, 2442661 - 2442746
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    ||||||||||| | ||||   |||||||||||||||||| || |||||||||||||||||||||| |||||| |||||| ||||||    
T  2442661 tatgtttggatacgataacatagaattgattaaacagaaagaatgttgtttggatagttttgatcaaaattatttttgaatgtata 2442746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 905 - 989
Target Start/End: Original strand, 16765723 - 16765808
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    ||||||| ||| |||||||| ||||||||||||||| | ||| |||| ||||||||||||||||| ||||| ||||||| ||||||    
T  16765723 tatgtttagatacaataatgtagaattgattaaacaaactgaatgttatttggatagttttgatcaaaattgcttttgaatgtata 16765808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 32496639 - 32496743
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| |||||||||| || | ||| ||||||||| |||||||| ||| |||||  |||||| ||||| ||||| ||||||||    
T  32496639 tatgtttggatacaataatgcataattgattaagcaaactgaatgttgtttgaatagtttttatcgaaattgtttttgaatgtataattactaaaataga 32496738  T
Q  1003 catag 1007  Q
    |||||    
T  32496739 catag 32496743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 43695697 - 43695630
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    |||||||||||  ||||||| ||||||||||||| ||||| | ||||||||||||||||| |||||||    
T  43695697 tatgtttggatataataatgtagaattgattaaagagaataaatgttgtttggatagtttcgatcaaa 43695630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 3395480 - 3395423
Alignment:
Q  454 gtagatgttaagaaacatataaatgagatgacttatatatctaatatttaaagatttt 511  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||| | | ||||||||    
T  3395480 gtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttaagatttt 3395423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 905 - 989
Target Start/End: Original strand, 33597639 - 33597724
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    ||||||||||| |||||||  | ||||||||||||| | | |  ||||||||||||||||||||| |||||| |||||| ||||||    
T  33597639 tatgtttggatacaataatataaaattgattaaacaaactaaaggttgtttggatagttttgatcaaaattatttttgaatgtata 33597724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 3e-45; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 5271036 - 5271172
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  5271036 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 5271135  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  5271136 catagttaaatacaaataaatagaaattactaaatta 5271172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 15353826 - 15353690
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  15353826 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 15353727  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  15353726 catagttaaatacaaataaatagaaattactaaatta 15353690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 26822003 - 26821867
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  26822003 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 26821904  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  26821903 catagttaaatacaaataaatagaaattactaaatta 26821867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 36495910 - 36496046
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  36495910 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 36496009  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  36496010 catagttaaatacaaataaatagaaattactaaatta 36496046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 38627885 - 38627749
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  38627885 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 38627786  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  38627785 catagttaaatacaaataaatagaaattactaaatta 38627749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 50978356 - 50978492
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  50978356 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 50978455  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  50978456 catagttaaatacaaataaatagaaattactaaatta 50978492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 51487905 - 51488041
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  51487905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 51488004  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  51488005 catagttaaatacaaataaatagaaattactaaatta 51488041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Original strand, 26999821 - 26999957
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  26999821 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttgaatagttttgatcaaaattacttttgaatgtataattaccaaaataga 26999920  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  26999921 catagttaaatacaaataaatagaaattactaaatta 26999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 905 - 1036
Target Start/End: Complemental strand, 38843983 - 38843847
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  38843983 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgttcggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 38843884  T
Q  1003 catagtt-aatacaa--taatagaaattactaaatta 1036  Q
    ||||||| |||||||   |||||||||||||||||||    
T  38843883 catagttaaatacaaataaatagaaattactaaatta 38843847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 913 - 1036
Target Start/End: Original strand, 7592743 - 7592871
Alignment:
Q  913 gatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacatagtt- 1009  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||     
T  7592743 gatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagtta 7592842  T
Q  1010 aatacaa--taatagaaattactaaatta 1036  Q
    |||| ||   |||||||||||||||||||    
T  7592843 aataaaaataaatagaaattactaaatta 7592871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 917 - 989
Target Start/End: Original strand, 42137140 - 42137213
Alignment:
Q  917 caataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtata 989  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| ||||||| ||||||    
T  42137140 caataatgcagaattgattaaacagattgaatgttgtttggatagttttgatcaaaattgcttttgaatgtata 42137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 31099893 - 31099997
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||| ||| ||||||||| ||||||| |||||||||||| ||||||||| ||||| ||||||| ||||| ||||| ||||| ||    
T  31099893 tatgtttggatacaataatgtagagttgattaaagagaatgaatgttgtttggatggttttgatcaaaattgcttttgaatgtataattactaaaatgga 31099992  T
Q  1003 catag 1007  Q
    |||||    
T  31099993 catag 31099997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 909 - 1007
Target Start/End: Complemental strand, 35606980 - 35606880
Alignment:
Q  909 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacata 1006  Q
    ||||||||||||||| |||||||||||||||| ||||||| || |||| |||||||||||| ||||| ||||||| ||||| ||||| ||||| ||||||    
T  35606980 tttggatgcaataatacagaattgattaaacataatgatttttatttgaatagttttgatcaaaattgcttttgaatgtataattacgaaaattgacata 35606881  T
Q  1007 g 1007  Q
    |    
T  35606880 g 35606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 905 - 1011
Target Start/End: Complemental strand, 46408139 - 46408032
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| |||||  |    
T  46408139 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatgaa 46408041  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  46408040 catagttaa 46408032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 16342898 - 16342965
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||    
T  16342898 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaa 16342965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 24076132 - 24076065
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||||||||||    
T  24076132 tatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggatagttttgatcaaa 24076065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 926 - 1007
Target Start/End: Complemental strand, 27576780 - 27576697
Alignment:
Q  926 agaattgattaaacagaatgattgttgtttggatagttttgatcaaa-ttacttttgattgtat-attaccaaaatagacatag 1007  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||| ||||| ||||| |||||||    
T  27576780 agaattgattaaacagaatgaatgttgtttggatagttttgatcaaatttgcttttgaatgtataattactaaaatggacatag 27576697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 4484662 - 4484766
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||| | | ||| |||||||||||||||||| | | ||||| ||||||| ||||| ||||| |||||| |    
T  4484662 tatgtttggatacaataatgcagaattgattaaataaattgaatgttgtttggatagtttttaacaaaattgcttttgaatgtataattactaaaataaa 4484761  T
Q  1003 catag 1007  Q
    |||||    
T  4484762 catag 4484766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 6706787 - 6706683
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | | | |||||||||||||||||| ||| ||||| |||||||  |||| ||||| ||||| ||    
T  6706787 tatgtttggatacaataatgcagaattgattaaacaaactaaatgttgtttggatagtttttatcaaaattgcttttgaacgtataattactaaaatgga 6706688  T
Q  1003 catag 1007  Q
    |||||    
T  6706687 catag 6706683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1011
Target Start/End: Original strand, 47655135 - 47655243
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| ||||||||| ||| |||| ||| |||||  |||||| ||||| ||||| ||||| ||    
T  47655135 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttgaataatttttatcaaaattgtttttgaatgtataattactaaaatgga 47655234  T
Q  1003 catagttaa 1011  Q
    |||||||||    
T  47655235 catagttaa 47655243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 50031498 - 50031394
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||| ||| |||||||||| ||||||||||||| | ||| |||||||||||||||||| ||| ||||||||||||| | ||| ||||| ||||| ||    
T  50031498 tatgttttgatacaataatgcataattgattaaacatactgaatgttgtttggatagtttttatcaaaattacttttgaatatataattactaaaatgga 50031399  T
Q  1003 catag 1007  Q
    |||||    
T  50031398 catag 50031394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 50521047 - 50521114
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||| |  ||||| |||||||||||||| |||||||||||||||||||||||||    
T  50521047 tatgtttggatacaataacgtggaattaattaaacagaatgaatgttgtttggatagttttgatcaaa 50521114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 909 - 965
Target Start/End: Complemental strand, 7385883 - 7385827
Alignment:
Q  909 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 965  Q
    ||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  7385883 tttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt 7385827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 1763366 - 1763299
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||| |||||||||||| | |||||  |||||||| ||||||||||||||||    
T  1763366 tatgtttggatacaataatgtagaattgattaagcggaatggatgttgtttagatagttttgatcaaa 1763299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 11829678 - 11829611
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| ||||||   ||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  11829678 tatgtttggatacaataacatagaattgattaaacaaaatgaatgtcgtttggatagttttgatcaaa 11829611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 45179993 - 45179926
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    |||||||||||  ||||||| |||||||||||||| |||||| |||||||| || |||||||||||||    
T  45179993 tatgtttggataaaataatgtagaattgattaaacggaatgaatgttgttttgacagttttgatcaaa 45179926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 909 - 972
Target Start/End: Complemental strand, 44740760 - 44740697
Alignment:
Q  909 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||| |||||||| ||||||||||||||| | ||| ||||||||||||| |||| ||||||    
T  44740760 tttggatacaataatgtagaattgattaaacaaactgaatgttgtttggataatttttatcaaa 44740697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 919 - 1007
Target Start/End: Original strand, 46033182 - 46033272
Alignment:
Q  919 ataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacatag 1007  Q
    |||||||| ||||||||||||| | ||| |||||||||||||||||| ||| |||||  |||||| ||||| ||||| ||||| |||||||    
T  46033182 ataatgcataattgattaaacaaattgaatgttgtttggatagtttttatcaaaattgattttgaatgtataattactaaaattgacatag 46033272  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 922 - 1011
Target Start/End: Original strand, 11050575 - 11050667
Alignment:
Q  922 atgcagaattgattaaacagaatgattgttgttt-ggatagttttgatc-aaattacttttgattgtat-attaccaaaatagacatagttaa 1011  Q
    ||||||||||||||||||| | | | |||||||| |||||||||||||| ||||| ||||||| ||||| ||||| ||||  |||||||||||    
T  11050575 atgcagaattgattaaacaaactaaatgttgttttggatagttttgatcaaaattgcttttgaatgtataattactaaaaaggacatagttaa 11050667  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 905 - 972
Target Start/End: Complemental strand, 41512811 - 41512745
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||| ||| ||||| |||||||||||| ||||| | ||| |||||||||||| ||||||||||||    
T  41512811 tatgtttagatacaata-tgcagaattgataaaacaaactgaatgttgtttggattgttttgatcaaa 41512745  T

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Target: scaffold0097 (Bit Score: 53; Significance: 8e-21; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 905 - 1007
Target Start/End: Original strand, 32499 - 32603
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||| ||| ||||| ||||||| ||||| ||||| ||||| ||    
T  32499 tatgtttggatacaataatgcataattgattaaacaaaatgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgga 32598  T
Q  1003 catag 1007  Q
    |||||    
T  32599 catag 32603  T

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Target: scaffold0184 (Bit Score: 48; Significance: 8e-18; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 905 - 972
Target Start/End: Original strand, 9212 - 9279
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    ||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||    
T  9212 tatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggatagttttgatcaaa 9279  T

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Target: scaffold0068 (Bit Score: 45; Significance: 5e-16; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 905 - 1007
Target Start/End: Complemental strand, 38372 - 38268
Alignment:
Q  905 tatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc-aaattacttttgattgtat-attaccaaaataga 1002  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||| ||||||||| ||| ||||| ||||||| ||| | ||||| ||||| ||    
T  38372 tatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttcgatagtttttatcaaaattgcttttgaatgtttaattactaaaatgga 38273  T
Q  1003 catag 1007  Q
    |||||    
T  38272 catag 38268  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 919 - 972
Target Start/End: Original strand, 301717 - 301770
Alignment:
Q  919 ataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaa 972  Q
    |||||||| |||||||||||||   ||| |||||||||||||||||||||||||    
T  301717 ataatgcaaaattgattaaacacgttgaatgttgtttggatagttttgatcaaa 301770  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 917 - 1011
Target Start/End: Complemental strand, 92196 - 92098
Alignment:
Q  917 caataatgcagaattgattaaacagaatgattgttgtttggatag--ttttgatc-aaattacttttgattgtat-attaccaaaatagacatagttaa 1011  Q
    |||||||||||||||||||||||| | | | ||||||| ||||||  |||| ||| ||||| ||||||| ||||| ||||| ||||| |||||||||||    
T  92196 caataatgcagaattgattaaacaaactaaatgttgttaggatagtttttttatcaaaattgcttttgaatgtataattactaaaatggacatagttaa 92098  T

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