View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4372-Insertion-7 (Length: 514)

Name: NF4372-Insertion-7
Description: NF4372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4372-Insertion-7
NF4372-Insertion-7
[»] chr7 (1 HSPs)
chr7 (7-514)||(2177631-2178138)


Alignment Details
Target: chr7 (Bit Score: 492; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 7 - 514
Target Start/End: Original strand, 2177631 - 2178138
Alignment:
Q  7 acgaatttcctcttagtcattttctgataaagctcagacacaccttcaatccctcttgacttcatcaatcctaagaaaattgtatgataagttacaccat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2177631 acgaatttcctcttagtcattttctgataaagctcagacacaccttcaatccctcttgacttcatcaatcctaagaaaattgtatgataagttacaccat 2177730  T
Q  107 ccggcaaaatttgcttttcaatcatctcatccatcaacgaaagcgcagatacaacatctctatttctaaccaacgtcgtaatcaacgcattataagcacc 206  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2177731 ccggcaaaatttgcttttcaatcatcccatccatcaacgaaagcgcagatacaacatctctatttctaaccaacgtcgtaatcaacgcattataaacacc 2177830  T
Q  207 agaatcaacaaccaaatttctcaacggaatctcattaaacaactgccacgccttccccgtattctgaaccaaccctgctccatgaatcaacgtagttatc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2177831 agaatcaacaaccaaatttctcaacggaatctcattaaacaactgccacgccttccccggattctgaaccaaccctgctccatgaatcaacgtagttatc 2177930  T
Q  307 gtttcaaccgacacaacaaacttcctactctccatctcttccaaaagcctcaaagcatcaccaaacctccctttcttacaataagcatcaatcctaatac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2177931 gtttcaaccgacacaacaaacttcctactctccatctcttccaaaagcctcaaagcatcaccaaacctccctttcttacaataagcatcaatcctaatac 2178030  T
Q  407 caaaactcacactatcaggcttaaacccccgcttaaccatctcatgataaaacaactcaacggacgtaacatcacccgtttccttaaaccctaacaacaa 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2178031 caaaactcacactatcaggcttaaacccccgcttaaccatctcatgataaaacaactcaacagacgtaacatcacccgtttccttaaaccctaacaacaa 2178130  T
Q  507 aatattca 514  Q
    ||||||||    
T  2178131 aatattca 2178138  T

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