View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4372-Insertion-8 (Length: 309)
Name: NF4372-Insertion-8
Description: NF4372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4372-Insertion-8 |
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Alignment Details
Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 28677084 - 28677159
Alignment:
| Q |
178 |
ttttatattgacattaatcacaactcttcaaatgatcatattatatcggggtaactaggtttcaatctttatcaat |
253 |
Q |
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| T |
28677084 |
ttttatattgacattaatcacaactcttcaattggtcatattatattggggtaactaagtttcaatctttatcaat |
28677159 |
T |
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Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 28676185 - 28676227
Alignment:
| Q |
41 |
tctctccttctatcacaccaccaaactatcacatttattgcat |
83 |
Q |
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| T |
28676185 |
tctctccttctatcacaccaccaaactatcacatttattgcat |
28676227 |
T |
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