View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4372-Insertion-9 (Length: 310)
Name: NF4372-Insertion-9
Description: NF4372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4372-Insertion-9 |
 |  |
|
| [»] chr1 (14 HSPs) |
 |  |
|
| [»] scaffold0802 (1 HSPs) |
 |  |
|
| [»] scaffold0319 (1 HSPs) |
 |  |
|
| [»] chr8 (16 HSPs) |
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| [»] chr6 (8 HSPs) |
 |  |
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| [»] chr5 (9 HSPs) |
 |  |
|
| [»] chr2 (11 HSPs) |
 |  |
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| [»] scaffold1221 (1 HSPs) |
 |  |
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| [»] scaffold0192 (1 HSPs) |
 |  |
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| [»] chr3 (7 HSPs) |
 |  |
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| [»] scaffold0110 (1 HSPs) |
 |  |
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| [»] chr7 (10 HSPs) |
 |  |
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| [»] scaffold0002 (1 HSPs) |
 |  |
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| [»] scaffold0598 (1 HSPs) |
 |  |  |
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| [»] scaffold0001 (1 HSPs) |
 |  |  |
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| [»] scaffold0015 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 6373357 - 6373255
Alignment:
| Q |
68 |
tcttgatgatgaaaattaaagaaaattaagtgtgttttagtttcttaaagctaaatttcaatttaatctaaacctaattttaatccttctatagtttaat |
167 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
6373357 |
tcttgatgatgaaaattaaagaaaattaagtgtgttttggtttcttaaagctaaatttcaatttaatctaaacctaattttaatccttctacaatttaat |
6373258 |
T |
 |
| Q |
168 |
ctt |
170 |
Q |
| |
|
||| |
|
|
| T |
6373257 |
ctt |
6373255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 11241688 - 11241577
Alignment:
| Q |
199 |
ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcag |
298 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
11241688 |
ttttgccaattgtgggattttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaatttcacttttgccccttatctttttg |
11241589 |
T |
 |
| Q |
299 |
ctaattgtgcga |
310 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11241588 |
ctaattgtgcga |
11241577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 3930462 - 3930367
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
3930462 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgtccaattgcacttttgtcccttatctttttgctaattgtgcga |
3930367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 16555799 - 16555704
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
16555799 |
attttgcaccccatctttttgccccctttctgattttacaccccatctttgtgttcaattgcacttttcccccttatctttttgctaattgtgcga |
16555704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 5206250 - 5206146
Alignment:
| Q |
206 |
aattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattg |
305 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| |
|
|
| T |
5206250 |
aattgtgcgattttgcaccctatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttcttccccctatctttttgctaattg |
5206151 |
T |
 |
| Q |
306 |
tgcga |
310 |
Q |
| |
|
||||| |
|
|
| T |
5206150 |
tgcga |
5206146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 13198676 - 13198771
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
13198676 |
attttgcaccccatctttttgccccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatcttttttctaattgtgcga |
13198771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 22681652 - 22681746
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
22681652 |
attttgcaccccatctttttgcccc-tttctaattttgcaccccatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcga |
22681746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 35393545 - 35393643
Alignment:
| Q |
212 |
gcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |
|
|
| T |
35393545 |
gcaattttgcaccccatctttttaccccctttttgattttgcaccctatctttgtgttcaattgaacttttgccccctatctttttgctaattgtgcga |
35393643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 6373443 - 6373379
Alignment:
| Q |
8 |
atttttatagatgtttttctttggaaagagtgactaacattatttgttaaacatatttgttcttg |
72 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6373443 |
atttttatagatgtttttctttggaaagagtgactaacattatttgttaaacatatttgttcttg |
6373379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 8488278 - 8488349
Alignment:
| Q |
237 |
cccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgc |
308 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||| ||||||||||| |
|
|
| T |
8488278 |
cccctttctgattttgcaccccgtctttgtgttcaattgcacttttgccccctatgtttttgctaattgtgc |
8488349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 27304983 - 27304904
Alignment:
| Q |
231 |
ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||| ||||||| ||||||||||||| |
|
|
| T |
27304983 |
ttttgccccttttctgattttgcaccccatatttgagttcaattgcactttttccccctatctttttgctaattgtgcga |
27304904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 49178636 - 49178683
Alignment:
| Q |
263 |
ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| || |||||||||| |
|
|
| T |
49178636 |
ttgtgttcaattgcacttttgccccctatctttttgccaattgtgcga |
49178683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 8109020 - 8108909
Alignment:
| Q |
199 |
ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcag |
298 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
8109020 |
ttttgccaattgtgcgattttgcaccccatctttttgccccctttttgattttgcaccccatctttgtgttcaattgcacttttgccccatatctttttg |
8108921 |
T |
 |
| Q |
299 |
ctaattgtgcga |
310 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8108920 |
ctaattgtgcga |
8108909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 17518588 - 17518491
Alignment:
| Q |
212 |
gcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17518588 |
gcaattttgcaccc-atctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
17518491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 41082980 - 41083075
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
41082980 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgtacttttgccccttatctttttactaattgtgcga |
41083075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 47955378 - 47955473
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
47955378 |
attttgcaccccatctttttgccccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcga |
47955473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 22149683 - 22149589
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22149683 |
attttgcaccccatctttttgcccc-tttctgattttgcaccccatctttgtgtttaattgcacttttgccccttatctttttgctaattgtgcga |
22149589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 48190798 - 48190848
Alignment:
| Q |
199 |
ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattt |
250 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
48190798 |
ttttgccaattgtgcgattttgcaccccat-ctttttccccctttctaattt |
48190848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 24671281 - 24671318
Alignment:
| Q |
197 |
ttttttgccaattgtgcaattttgcaccccatcctttt |
234 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
24671281 |
ttttttgccaattgtgcgattttgcactccatcctttt |
24671318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 4692459 - 4692431
Alignment:
| Q |
200 |
tttgccaattgtgcaattttgcaccccat |
228 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4692459 |
tttgccaattgtgcaattttgcaccccat |
4692431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 6703920 - 6703892
Alignment:
| Q |
200 |
tttgccaattgtgcaattttgcaccccat |
228 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
6703920 |
tttgccaattgtgcaattttgcaccccat |
6703892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 9347577 - 9347549
Alignment:
| Q |
200 |
tttgccaattgtgcaattttgcaccccat |
228 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
9347577 |
tttgccaattgtgcaattttgcaccccat |
9347549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 32162757 - 32162785
Alignment:
| Q |
200 |
tttgccaattgtgcaattttgcaccccat |
228 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
32162757 |
tttgccaattgtgcaattttgcaccccat |
32162785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 39690825 - 39690872
Alignment:
| Q |
203 |
gccaattgtgcaattttgcaccccatccttttgccccctttctgatttt |
251 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
39690825 |
gccaattgtgcgattttgcaccctatcctttt-ctccctttctgatttt |
39690872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 46824304 - 46824276
Alignment:
| Q |
200 |
tttgccaattgtgcaattttgcaccccat |
228 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
46824304 |
tttgccaattgtgcaattttgcaccccat |
46824276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 48191382 - 48191333
Alignment:
| Q |
199 |
ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattt |
250 |
Q |
| |
|
|||||||||| |||| ||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
48191382 |
ttttgccaatggtgcgattttgcaccccatc--ttttccccctttctgattt |
48191333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0802 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0802
Description:
Target: scaffold0802; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 1402 - 1307
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1402 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
1307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 6679 - 6584
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6679 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
6584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 84; Significance: 6e-40; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 15156167 - 15156072
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15156167 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
15156072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 37752186 - 37752281
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37752186 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
37752281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 43245943 - 43246038
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
43245943 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattacacttttgccccttatctttttgctaattgtgcga |
43246038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 12281196 - 12281291
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
12281196 |
attttgcaccccatctttttgccccctttcagattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaactgtgcga |
12281291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 41662385 - 41662290
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
41662385 |
attttgcaccccatctttttgccccctttctgattttgcaccttatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
41662290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 43162521 - 43162424
Alignment:
| Q |
213 |
caattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
43162521 |
caattttgcacctcatctttttgtcccctttctgattttgcaccccatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcga |
43162424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 765806 - 765886
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcttt |
295 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
765806 |
attttgcaccccatctttttgccccctttcagattttgcaccccatctttgtgttcaattgcacttttgccccttatcttt |
765886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 16929013 - 16929091
Alignment:
| Q |
216 |
ttttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcttt |
295 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16929013 |
ttttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgtt-aattgcacttttgccccttatcttt |
16929091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 34314046 - 34313955
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgt |
306 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
34314046 |
attttgcaccccatctttttgccccttttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatctttttgctaattgt |
34313955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 74967 - 74887
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcttt |
295 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||| |
|
|
| T |
74967 |
attttgcaccccatctttttgccccctttctgattttgcaccacatctttgtgtttaattgcacttttgtcccctatcttt |
74887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 18019875 - 18019954
Alignment:
| Q |
231 |
ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
18019875 |
ttttgccccctttctgattttgcaccgcatctttgtgttcaattgcacttttgccccctatctttttcctaattgtgcga |
18019954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 7127940 - 7127843
Alignment:
| Q |
208 |
ttgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattg |
305 |
Q |
| |
|
|||||| ||||||||||| ||| |||| |||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||| |||||||| |
|
|
| T |
7127940 |
ttgtgcgattttgcaccctatctttttaccccttttctgattttgcatcccatttttgtgttcaattgcacttttaccccctatctttttgctaattg |
7127843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 9465675 - 9465739
Alignment:
| Q |
246 |
gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |
|
|
| T |
9465675 |
gattttgcaccctatctttgtgttcaattgcacttttgccccctatctttttgctaactgtgcga |
9465739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 37670221 - 37670169
Alignment:
| Q |
231 |
ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttg |
283 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |
|
|
| T |
37670221 |
ttttgccccctttctgatttagcaccccatctttgtgtttaattgcatttttg |
37670169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 33748236 - 33748196
Alignment:
| Q |
247 |
attttgcaccccatctttgtgttcaattgcacttttgcccc |
287 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
33748236 |
attttgcacctcatctttgtgttcaattgcacttttgcccc |
33748196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 43597892 - 43597957
Alignment:
| Q |
245 |
tgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||| | || ||||||||||||||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
43597892 |
tgattttgcatctcaactttgtgttcaattgtgcttttgccccctatctttttgctaattgtgcga |
43597957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 84; Significance: 6e-40; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 3403971 - 3403876
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3403971 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
3403876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 18242138 - 18242043
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
18242138 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgttaattgtgcga |
18242043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 30388346 - 30388251
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30388346 |
attttgcaccccatctttttaccccctttctgattttgcacctcatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
30388251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 2762555 - 2762650
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
2762555 |
attttgcacctcatctttttgccccctttttgattttgcaccccatctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcga |
2762650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 13579634 - 13579541
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgc |
308 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||||||| |
|
|
| T |
13579634 |
attttgcaccccatttttttggcccctttcttattttgcaccccatatttgtgttcaattgcacttttgccccctatatttttgctaattgtgc |
13579541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 10039918 - 10039854
Alignment:
| Q |
246 |
gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
10039918 |
gattttgcaccccatctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcga |
10039854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 11656583 - 11656647
Alignment:
| Q |
246 |
gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||| |
|
|
| T |
11656583 |
gattttgcaccccatctttgtgttcaattgcacttttgccccctatcgttttgataattgtgcga |
11656647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 33972249 - 33972203
Alignment:
| Q |
261 |
ctttgtgttcaattgcacttttgccccttatctttcagctaattgtg |
307 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
33972249 |
ctttgtgttcaattgcacttttgccccatatctttttgctaattgtg |
33972203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 18433087 - 18433182
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
18433087 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
18433182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 25115829 - 25115924
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
25115829 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcattttgctaattgtgcga |
25115924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 25174921 - 25175016
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
25174921 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcattttgctaattgtgcga |
25175016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 34576937 - 34577032
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
34576937 |
attttgcaccccatctttttgccccctttctgattttccaccccatctttgtgtttaattgcacttttgccccttatctttttgctaattgtgcga |
34577032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 22429223 - 22429138
Alignment:
| Q |
199 |
ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgc |
284 |
Q |
| |
|
|||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22429223 |
ttttgctaattgtgcgattttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgc |
22429138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 195 - 310
Target Start/End: Original strand, 5187574 - 5187689
Alignment:
| Q |
195 |
tattttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctt |
294 |
Q |
| |
|
|||||||||| ||| |||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
5187574 |
tattttttgctaatcgtgcgattttgcaccccatctttttgtcccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccctatctt |
5187673 |
T |
 |
| Q |
295 |
tcagctaattgtgcga |
310 |
Q |
| |
|
| ||||||| ||||| |
|
|
| T |
5187674 |
tttgctaattatgcga |
5187689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 9665582 - 9665693
Alignment:
| Q |
199 |
ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcag |
298 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| | |
|
|
| T |
9665582 |
ttttgctaattgtgcaattttgcaccccatctttttgctccctttctgattttgcacctcatctttgtgttcaattgtgtttttgccccctatctttttg |
9665681 |
T |
 |
| Q |
299 |
ctaattgtgcga |
310 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9665682 |
ctaattgtgcga |
9665693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 26020522 - 26020617
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| |
|
|
| T |
26020522 |
attttgcaccgcatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgtcccttatctttttgttaattgtgcga |
26020617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 5779844 - 5779749
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||| ||||| |||| || ||||||||||||||| | ||| |||||||||||||||||||||| | | ||||||| ||||||||||||| |
|
|
| T |
5779844 |
attttgcattccatctttttttcctctttctgattttgcatctcatttttgtgttcaattgcacttttgtctcctatctttttgctaattgtgcga |
5779749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 6171442 - 6171344
Alignment:
| Q |
212 |
gcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
6171442 |
gcaattttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgttaattgtgcga |
6171344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 11883692 - 11883790
Alignment:
| Q |
212 |
gcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11883692 |
gcaattttgcacctcatctttttgccccctttatgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
11883790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 20347446 - 20347351
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
20347446 |
attttgcaccccatctttttgtcccctttctgattttgcaccccatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcga |
20347351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 30190995 - 30191090
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
30190995 |
attttgcaccccatctttttgccccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcga |
30191090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 32673125 - 32673030
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32673125 |
attttgcaccccatcttttcgccctctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
32673030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 40469711 - 40469616
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| |
|
|
| T |
40469711 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttcccccttatcgttttgctaattgtgcga |
40469616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 26737763 - 26737667
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttc-aattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
26737763 |
attttacaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaaattgcacttttgccccctatctttttgctaattgtgcga |
26737667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 15920991 - 15920922
Alignment:
| Q |
241 |
tttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
15920991 |
tttctgattttgcaccccatctttgtgttcaattgcacttttgccccctaactttttgctaattgtgcga |
15920922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 17345803 - 17345898
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||| ||| ||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| |
|
|
| T |
17345803 |
attttgcaccctatctttttggcccccttttgattttgcactccatctttgtgttcaattgcacttttgccccctatatttttgttaattgtgcga |
17345898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 40221563 - 40221499
Alignment:
| Q |
246 |
gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
40221563 |
gattttgcaccccatctttgtgttcaattgcgcttttgccccctatctttttgctaattgtgcga |
40221499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 18296720 - 18296670
Alignment:
| Q |
199 |
ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattt |
250 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
18296720 |
ttttgccaattgtgcgattttgcaccccat-ctttttccccctttctgattt |
18296670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1221 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold1221
Description:
Target: scaffold1221; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 1537 - 1648
Alignment:
| Q |
199 |
ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcag |
298 |
Q |
| |
|
|||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |
|
|
| T |
1537 |
ttttgccaattgtgtgattttgcaccccatcttattgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgtctcttatctttttg |
1636 |
T |
 |
| Q |
299 |
ctaattgtgcga |
310 |
Q |
| |
|
|||||||||||| |
|
|
| T |
1637 |
ctaattgtgcga |
1648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0192 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0192
Description:
Target: scaffold0192; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 25351 - 25256
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
25351 |
attttgcaccccatctttttgccccatttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcga |
25256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 18874961 - 18875056
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
18874961 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcga |
18875056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 20969002 - 20968907
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
20969002 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcattttgctaattgtgcga |
20968907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 10293680 - 10293774
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
10293680 |
attttgcaccccatctttttgccccctttctgattttgcaccc-atctttgtgttcaattgcacttttgccccttatctttttgttaattgtgcga |
10293774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 9026805 - 9026899
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
9026805 |
attttgcaccccatcttttt-ccccctttctgattttgccccccgtctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcga |
9026899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 3644795 - 3644755
Alignment:
| Q |
246 |
gattttgcaccccatctttgtgttcaattgcacttttgccc |
286 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3644795 |
gattttgcaccccatctttgtgtttaattgcacttttgccc |
3644755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 21895657 - 21895736
Alignment:
| Q |
171 |
ggcttaattgcacttttnnnnnnntattttttgccaattgtgcaattttgcaccccatccttttgccccctttctgatttt |
251 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
21895657 |
ggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccat-cttttttcccctttctgatttt |
21895736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 47666361 - 47666333
Alignment:
| Q |
200 |
tttgccaattgtgcaattttgcaccccat |
228 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
47666361 |
tttgccaattgtgcaattttgcaccccat |
47666333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 45789 - 45694
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
45789 |
attttgcaccccatctttttgccccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcga |
45694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 3687639 - 3687544
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| |
|
|
| T |
3687639 |
attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgtcccttatttttttgctaattgtgcga |
3687544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 9412307 - 9412212
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
9412307 |
attttgcaccccatctttttgccccctttcagattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaactgtgcga |
9412212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 35080243 - 35080139
Alignment:
| Q |
206 |
aattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattg |
305 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||| |
|
|
| T |
35080243 |
aattgtgcgattttgcaccccatctttttgcctcctttctgattttgcacctcatctttgtgttcaattgtgcttttgccccctatctttaagctaattg |
35080144 |
T |
 |
| Q |
306 |
tgcga |
310 |
Q |
| |
|
||||| |
|
|
| T |
35080143 |
tgcga |
35080139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 6908515 - 6908401
Alignment:
| Q |
195 |
tattttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctt |
294 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
6908515 |
tattttttgctaattgtgcgattttgcaccc-atctttttgcctcctttctgattttgcaccccatctttgtgttcaattgcgcttttaccccctatctt |
6908417 |
T |
 |
| Q |
295 |
tcagctaattgtgcga |
310 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
6908416 |
tttgctaattgtgcga |
6908401 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 5349753 - 5349664
Alignment:
| Q |
206 |
aattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcttt |
295 |
Q |
| |
|
|||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
5349753 |
aattgtgcgattttgcaccccatctttttaccccctttctgattttgcaccccatctttgtattcaattgcacttttgccccctatcttt |
5349664 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 13772881 - 13772802
Alignment:
| Q |
231 |
ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
|||||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
13772881 |
ttttgcaccctttctaatttttcaccccatctttgtgttcaattacacttttgccccttatctttttgctaattgtgcga |
13772802 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 15567255 - 15567179
Alignment:
| Q |
231 |
ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtg |
307 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||| |
|
|
| T |
15567255 |
ttttgcaccctttctgattttgcaccccatctttgtgttcaattgcacgtttgccccctctctttttgctaattgtg |
15567179 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 34235961 - 34235881
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcttt |
295 |
Q |
| |
|
||||||||| || || ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
34235961 |
attttgcacgccgtctttttgccccatttctgattctgcaccccatctttgtgtttaattgcacttttgccccctatcttt |
34235881 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 33628466 - 33628543
Alignment:
| Q |
231 |
ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgc |
308 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||| ||||| || ||||||| ||||||||||| |
|
|
| T |
33628466 |
ttttgcaccctttctgattttgcaccccatccttgtgttcaattgcacatttgcaccctatctttttgctaattgtgc |
33628543 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 29292025 - 29291982
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcacccc |
258 |
Q |
| |
|
||||||||||| ||| ||||||||| |||||||||||||||||| |
|
|
| T |
29292025 |
attttgcaccctatctttttgccccatttctgattttgcacccc |
29291982 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 411993 - 412088
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga |
310 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
411993 |
attttgcaccctatctttttgccccctttctgattttgcaccctatctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcga |
412088 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0598 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0598
Description:
Target: scaffold0598; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 6850 - 6768
Alignment:
| Q |
222 |
accccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaatt |
304 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
6850 |
accccatctttttgctccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatttttttgctaatt |
6768 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 439001 - 439063
Alignment:
| Q |
246 |
gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgc |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
439001 |
gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgc |
439063 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 16925 - 17005
Alignment:
| Q |
215 |
attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcttt |
295 |
Q |
| |
|
||||||||||||||| |||| | |||||||||||||||||| || ||||| |||||||||||||||||| ||| ||||||| |
|
|
| T |
16925 |
attttgcaccccatctttttcctccctttctgattttgcactccgtctttttgttcaattgcacttttgtcccctatcttt |
17005 |
T |
 |
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