View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4373_low_3 (Length: 625)

Name: NF4373_low_3
Description: NF4373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4373_low_3
NF4373_low_3
[»] chr2 (18 HSPs)
chr2 (258-593)||(16411777-16412113)
chr2 (102-232)||(31991578-31991708)
chr2 (102-232)||(15891375-15891505)
chr2 (102-217)||(16708042-16708157)
chr2 (106-217)||(20148784-20148895)
chr2 (102-217)||(16708492-16708607)
chr2 (102-153)||(27650170-27650221)
chr2 (195-232)||(2918718-2918755)
chr2 (195-232)||(24108147-24108184)
chr2 (195-232)||(34521106-34521143)
chr2 (195-231)||(10359564-10359600)
chr2 (195-231)||(17538294-17538330)
chr2 (195-231)||(23408535-23408571)
chr2 (2-33)||(16253978-16254009)
chr2 (198-232)||(43492276-43492310)
chr2 (195-228)||(19470978-19471011)
chr2 (195-232)||(37312018-37312055)
chr2 (199-232)||(40676771-40676804)
[»] chr4 (32 HSPs)
chr4 (98-232)||(9717931-9718065)
chr4 (102-232)||(13866616-13866747)
chr4 (98-232)||(21411354-21411488)
chr4 (98-232)||(21411957-21412091)
chr4 (102-231)||(18413157-18413286)
chr4 (102-217)||(3393940-3394055)
chr4 (102-232)||(31324526-31324656)
chr4 (102-232)||(17292387-17292517)
chr4 (106-231)||(10315169-10315294)
chr4 (102-214)||(17211906-17212018)
chr4 (103-231)||(24576606-24576734)
chr4 (161-231)||(4911006-4911076)
chr4 (159-232)||(23620571-23620644)
chr4 (189-232)||(49816802-49816845)
chr4 (195-232)||(2773824-2773861)
chr4 (102-143)||(13851102-13851143)
chr4 (195-232)||(43888866-43888903)
chr4 (195-232)||(49423107-49423144)
chr4 (195-232)||(51427552-51427589)
chr4 (195-231)||(956806-956842)
chr4 (195-231)||(25763388-25763424)
chr4 (195-231)||(34152638-34152674)
chr4 (195-231)||(44559679-44559715)
chr4 (195-231)||(49571919-49571955)
chr4 (198-232)||(49791296-49791330)
chr4 (159-232)||(20758631-20758704)
chr4 (159-232)||(20765022-20765095)
chr4 (195-228)||(21170270-21170303)
chr4 (195-232)||(42887090-42887127)
chr4 (189-217)||(24607692-24607720)
chr4 (195-231)||(36775870-36775906)
chr4 (195-231)||(45940333-45940369)
[»] chr5 (19 HSPs)
chr5 (102-232)||(13130729-13130859)
chr5 (102-232)||(18921143-18921273)
chr5 (102-217)||(10398402-10398517)
chr5 (105-172)||(12743660-12743727)
chr5 (105-172)||(12806481-12806548)
chr5 (102-153)||(36311672-36311723)
chr5 (161-217)||(33371562-33371618)
chr5 (106-180)||(17366249-17366322)
chr5 (195-232)||(1695604-1695641)
chr5 (195-232)||(4723430-4723467)
chr5 (195-232)||(34683281-34683318)
chr5 (195-232)||(36349689-36349726)
chr5 (195-231)||(1972181-1972217)
chr5 (195-231)||(6792828-6792864)
chr5 (195-231)||(18309078-18309114)
chr5 (195-232)||(35566090-35566127)
chr5 (159-232)||(36311494-36311567)
chr5 (195-227)||(1399661-1399693)
chr5 (195-231)||(25498901-25498937)
[»] chr3 (19 HSPs)
chr3 (98-232)||(25887068-25887202)
chr3 (102-217)||(6754829-6754944)
chr3 (98-232)||(20375340-20375474)
chr3 (102-217)||(6463825-6463940)
chr3 (124-232)||(14265669-14265777)
chr3 (161-215)||(7955224-7955278)
chr3 (195-232)||(34646573-34646610)
chr3 (195-232)||(46413669-46413706)
chr3 (195-231)||(41578738-41578774)
chr3 (195-231)||(43570694-43570730)
chr3 (195-231)||(49274236-49274272)
chr3 (195-230)||(45099825-45099860)
chr3 (195-230)||(51016088-51016123)
chr3 (195-232)||(27187889-27187926)
chr3 (195-232)||(42322761-42322798)
chr3 (195-231)||(14632269-14632305)
chr3 (1-33)||(25887264-25887296)
chr3 (195-231)||(30193364-30193400)
chr3 (195-231)||(46345961-46345997)
[»] chr6 (14 HSPs)
chr6 (102-232)||(14482545-14482675)
chr6 (117-232)||(20241849-20241964)
chr6 (117-232)||(22135833-22135948)
chr6 (117-232)||(22143186-22143301)
chr6 (106-217)||(23911404-23911515)
chr6 (102-218)||(17464951-17465065)
chr6 (193-232)||(4495703-4495742)
chr6 (195-232)||(12397600-12397637)
chr6 (195-232)||(30256946-30256983)
chr6 (195-232)||(34802540-34802577)
chr6 (195-232)||(7821396-7821433)
chr6 (195-232)||(32026976-32027013)
chr6 (195-232)||(32037035-32037072)
chr6 (195-231)||(13403629-13403665)
[»] chr7 (18 HSPs)
chr7 (102-232)||(1642054-1642184)
chr7 (117-231)||(4230130-4230244)
chr7 (102-231)||(18149935-18150064)
chr7 (138-232)||(3380347-3380441)
chr7 (145-231)||(11826436-11826522)
chr7 (161-217)||(21614000-21614056)
chr7 (102-153)||(150496-150547)
chr7 (189-232)||(31267435-31267478)
chr7 (195-231)||(10224888-10224924)
chr7 (195-231)||(22291650-22291686)
chr7 (195-231)||(41622900-41622936)
chr7 (195-231)||(48271470-48271506)
chr7 (195-232)||(20877410-20877447)
chr7 (195-232)||(28113752-28113789)
chr7 (195-232)||(42735783-42735820)
chr7 (164-232)||(150657-150725)
chr7 (102-142)||(11825081-11825121)
chr7 (195-231)||(42683222-42683258)
[»] chr1 (16 HSPs)
chr1 (106-232)||(16531554-16531680)
chr1 (102-217)||(18843068-18843183)
chr1 (102-217)||(5766107-5766220)
chr1 (195-232)||(12790632-12790669)
chr1 (195-232)||(17373291-17373328)
chr1 (195-232)||(23343460-23343497)
chr1 (195-232)||(35525546-35525583)
chr1 (195-232)||(35586272-35586309)
chr1 (195-232)||(36910370-36910407)
chr1 (195-232)||(40532764-40532801)
chr1 (195-231)||(6436532-6436568)
chr1 (195-231)||(13973744-13973780)
chr1 (195-231)||(42571142-42571178)
chr1 (195-231)||(49261057-49261093)
chr1 (195-232)||(14173107-14173144)
chr1 (195-232)||(35185793-35185830)
[»] chr8 (5 HSPs)
chr8 (461-593)||(16912092-16912226)
chr8 (195-232)||(28167612-28167649)
chr8 (196-232)||(26487261-26487297)
chr8 (195-228)||(18439656-18439689)
chr8 (195-231)||(42168320-42168356)
[»] scaffold0039 (1 HSPs)
scaffold0039 (191-232)||(107857-107898)
[»] scaffold0589 (1 HSPs)
scaffold0589 (195-231)||(5094-5130)
[»] scaffold0192 (1 HSPs)
scaffold0192 (195-232)||(17309-17346)
[»] scaffold0618 (1 HSPs)
scaffold0618 (195-231)||(4918-4954)


Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-126; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 258 - 593
Target Start/End: Complemental strand, 16412113 - 16411777
Alignment:
Q  258 catggcttgatcaatcttttttaaacattgtgtgttctcttttcatttataatcnnnnnnnnnnnatcaatctatgaacttataatttaagaaaagatac 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  16412113 catggcttgatcaatcttttttaaacattgtgtgttctcttttcatttataatcttttttg----atcaatctatgaacttataatttaagaaaagatac 16412018  T
Q  358 acttttttcccctgaagtttctttaaatgacacagacattcctctatttttacaatagacaacaacctctccccatggaatctcttaaaatagat-nnnn 456  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  16412017 acttacctcccctgaagtttctttaaatgacacagacattcctctatttttacaatagacaacaacctctccccatggaatctcttaaaatagataaaaa 16411918  T
Q  457 nnnnctcccttatgagc----ttaacaccattaactaaattgttaaacatccatctaattttacatttgacggtaactttcataagatctcttaaaattg 552  Q
        |||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16411917 aaaactcccttatgagcttaattaacaccattaactaaattgttaaacatccatctaattttacatttgatggtaactttcataagatctcttaaaattg 16411818  T
Q  553 ataaaaaccaaccttcctaacctaacattattattgttact 593  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  16411817 ataaaaaccaaccttcctagcctaaaattattattgttact 16411777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 31991708 - 31991578
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| |||||||||||||||||| |||||||  ||||||||| |||||||||||||||||| ||||||| | |||| |||| ||||||||    
T  31991708 taagttatgatatcgaattccttcatataagatgagtgtcatggaatgcacctcattctttatgtgatgactcgtcttatatgagggaattcgatgtgat 31991609  T
Q  202 aacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||| || | ||||||||    
T  31991608 aacatatatagttgattttgtagaatacatg 31991578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 15891505 - 15891375
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||  |||||||||||||||||| |||||||| ||||| ||| |||||| ||||||||||  | ||||| | |||| |||||||||||||    
T  15891505 taagttatgatattgaattccttcatataagatgagtgtcacggaatggacctcattctatatgtgatgattcctcttatacgagggaatttgatgtgat 15891406  T
Q  202 aacatatatagttgattatgcataatacatg 232  Q
    ||||||||||| ||||| ||| |||||||||    
T  15891405 aacatatatagatgattctgcctaatacatg 15891375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 16708042 - 16708157
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||| ||||| |||||||||||||||||| | |||||| ||||||||| |  ||||||||||||||| ||||||| | ||   |||||||||||||    
T  16708042 taagttataatatcgaattccttcatataagatgattgtcacggaatgcacctcggtctttatgtgatgactcgtcttatatgaatgaatttgatgtgat 16708141  T
Q  202 aacatatatagttgat 217  Q
    ||||||||| ||||||    
T  16708142 aacatatatcgttgat 16708157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 20148784 - 20148895
Alignment:
Q  106 ttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataaca 205  Q
    |||||||||  |||||||||||||||||| |||| ||| ||||||||| || ||||||||||||||| | ||||| |  | | |||||||||||||||||    
T  20148784 ttatgatattgaattccttcatataagatgagtgccacggaatgcacctcagtctttatgtgatgactcatcttatataaaggaatttgatgtgataaca 20148883  T
Q  206 tatatagttgat 217  Q
    ||||||||||||    
T  20148884 tatatagttgat 20148895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 16708492 - 16708607
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| ||||||||||| |||||| |||||||  ||||||||  |  ||||||||||||||| ||||||| | ||   ||||||||| |||    
T  16708492 taagttatgatatcgaattccttcatgtaagatgagtgtcatggaatgcacatcggtctttatgtgatgactcgtcttatatgaatgaatttgatgagat 16708591  T
Q  202 aacatatatagttgat 217  Q
    ||||||||||||||||    
T  16708592 aacatatatagttgat 16708607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 27650221 - 27650170
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcacc 153  Q
    |||||||||||||  |||||||||||||||||| |||||||| |||||||||    
T  27650221 taagttatgatattgaattccttcatataagatgagtgtcacggaatgcacc 27650170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 2918755 - 2918718
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  2918755 atgtgataacatatatagttgaatatgcataatacatg 2918718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 24108184 - 24108147
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  24108184 atgtgataacatatatagttgaatatgcataatacatg 24108147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 34521143 - 34521106
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34521143 atgtgataacatatatagttgaatatgcataatacatg 34521106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 10359600 - 10359564
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  10359600 atgtgataacatatatagttgaatatgcataatacat 10359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 17538330 - 17538294
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  17538330 atgtgataacatatatagttgaatatgcataatacat 17538294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 23408535 - 23408571
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  23408535 atgtgataacatatatagttgaatatgcataatacat 23408571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 16253978 - 16254009
Alignment:
Q  2 taagacaattgttgtagttggaaggctctacc 33  Q
    ||||||||||||||||||||||||||||||||    
T  16253978 taagacaattgttgtagttggaaggctctacc 16254009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 232
Target Start/End: Original strand, 43492276 - 43492310
Alignment:
Q  198 tgataacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||||| |||||||||||||||    
T  43492276 tgataacatatatagttgaatatgcataatacatg 43492310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 19471011 - 19470978
Alignment:
Q  195 atgtgataacatatatagttgattatgcataata 228  Q
    |||||||||||||||||||||| |||||||||||    
T  19471011 atgtgataacatatatagttgaatatgcataata 19470978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 37312055 - 37312018
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  37312055 atgtgataacatatatagttgaatatgcatgatacatg 37312018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 40676804 - 40676771
Alignment:
Q  199 gataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||| |||||||||||||||    
T  40676804 gataacatatatagttgaatatgcataatacatg 40676771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 6e-51; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 98 - 232
Target Start/End: Original strand, 9717931 - 9718065
Alignment:
Q  98 cttttaagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatg 197  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | |||  |||||||||    
T  9717931 cttttaagttatgatatcgaattccttcatataagatgagtgtcacagaatgcacctcattctttatgtgatgacccgtcttatatgagagaatttgatg 9718030  T
Q  198 tgataacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||||||| |||||||||||||    
T  9718031 tgataacatatatagttgattctgcataatacatg 9718065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 13866616 - 13866747
Alignment:
Q  102 taagttatgatatcaaattccttcat-ataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtga 200  Q
    |||||||||||||| ||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||| |||||||    
T  13866616 taagttatgatatcgaattccttccttataagatgagtgtcacagaatgcacctcattctttatgtgatgactcgtcttatatgaggaaattcgatgtga 13866715  T
Q  201 taacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||| |||||||||||||    
T  13866716 taacatatatagttgattctgcataatacatg 13866747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 98 - 232
Target Start/End: Complemental strand, 21411488 - 21411354
Alignment:
Q  98 cttttaagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatg 197  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||| | |||| |||||||||    
T  21411488 cttttaagttatgatatctaattccttcatataagatgagtgtcacaaaatgcacctcattctttatttgatgacccgtcttatatgagggaatttgatg 21411389  T
Q  198 tgataacatatatagttgattatgcataatacatg 232  Q
    |||| |||||||||||||||| || | ||||||||    
T  21411388 tgatgacatatatagttgattctggagaatacatg 21411354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 98 - 232
Target Start/End: Original strand, 21411957 - 21412091
Alignment:
Q  98 cttttaagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatg 197  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||| | |||| |||||||||    
T  21411957 cttttaagttatgatatctaattccttcatataagatgagtgtcacaaaatgcacctcattctttatttgatgacccgtcttatatgagggaatttgatg 21412056  T
Q  198 tgataacatatatagttgattatgcataatacatg 232  Q
    |||| |||||||||||||||| || | ||||||||    
T  21412057 tgatgacatatatagttgattctggagaatacatg 21412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 18413157 - 18413286
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||| ||||||||  |||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||||| | |||| |||||||||||||    
T  18413157 taagatatgatattgaattccttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgactcgtcttatatgagggaatttgatgtgat 18413256  T
Q  202 aacatatatagttgattatgcataatacat 231  Q
    ||||||||||||||||| ||||||||||||    
T  18413257 aacatatatagttgattttgcataatacat 18413286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 3393940 - 3394055
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||||  | || | |||||||||||||    
T  3393940 taagttatgatatcgaattccttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgactcgtcttttatgaaggaatttgatgtgat 3394039  T
Q  202 aacatatatagttgat 217  Q
    ||||||||||||||||    
T  3394040 aacatatatagttgat 3394055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 31324526 - 31324656
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    ||||||||||||||||||| ||||||||||||| ||||||  |||||||||| |||||||||||||||||| | ||||| | |||  |||| ||| ||||    
T  31324526 taagttatgatatcaaatttcttcatataagatgagtgtcctagaatgcacctcattctttatgtgatgactcatcttatacgagagaattcgatatgat 31324625  T
Q  202 aacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||| |||||||||||||    
T  31324626 aacatatatagttgattctgcataatacatg 31324656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 17292387 - 17292517
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| | |||||||||||||||| |||||||  ||||||||| |||||||||||||||||| ||||||| | |||| |||| ||| ||||    
T  17292387 taagttatgatatcgagttccttcatataagatgagtgtcatggaatgcacctcattctttatgtgatgactcgtcttatatgagggaattcgatttgat 17292486  T
Q  202 aacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||| || | ||||||||    
T  17292487 aacatatatagttgattttgtagaatacatg 17292517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 10315169 - 10315294
Alignment:
Q  106 ttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataaca 205  Q
    |||||||||| |||||||||||||| ||| || ||||||||||||| | |||||| ||||||||||| ||||||| | ||   |||||||||||||||||    
T  10315169 ttatgatatcgaattccttcatatatgatgagcgtcacagaatgcaactcattctatatgtgatgactcgtcttatatgaatgaatttgatgtgataaca 10315268  T
Q  206 tatatagttgattatgcataatacat 231  Q
    ||| ||||||||||||||||||||||    
T  10315269 tatctagttgattatgcataatacat 10315294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 17211906 - 17212018
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||||||  |||||  | || | |||||||||||||    
T  17211906 taagttatgatatcaaattccttcatataagatgagtgtcacggaatgcacctcattctttgtgtgatgacttgtcttgtatgaaggaatttgatgtgat 17212005  T
Q  202 aacatatatagtt 214  Q
    |||||||||||||    
T  17212006 aacatatatagtt 17212018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 24576734 - 24576606
Alignment:
Q  103 aagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgata 202  Q
    ||||||| ||||| |||||||||||||||||| |||||||| || ||||||  ||| ||||||||||||| ||||||| | |||| ||||||||||||||    
T  24576734 aagttataatatcgaattccttcatataagatgagtgtcacggactgcaccttattttttatgtgatgactcgtcttatatgagggaatttgatgtgata 24576635  T
Q  203 acatatatagttgattatgcataatacat 231  Q
    |||||||||||||||| || | |||||||    
T  24576634 acatatatagttgattttgtagaatacat 24576606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 4911076 - 4911006
Alignment:
Q  161 ttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||| ||||||| | |||  |||||||||||||||||||||||||||||| | ||||||||||    
T  4911076 ttatgtgatgactcgtcttatatgagagaatttgatgtgataacatatatagttgattcttcataatacat 4911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 23620644 - 23620571
Alignment:
Q  159 ctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||| ||| ||||||| | |||  |||| ||||||||||||||||||||||||| |||||||||||||    
T  23620644 ctttatgtgacgactcgtcttatatgagagaattcgatgtgataacatatatagttgattctgcataatacatg 23620571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 49816845 - 49816802
Alignment:
Q  189 aatttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  49816845 aatttgatgtgataacatatgtagttgattatgcataatacatg 49816802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 2773824 - 2773861
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  2773824 atgtgataacatatatagttgaatatgcataatacatg 2773861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 13851102 - 13851143
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcac 143  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  13851102 taagttatgatatcgaattccttcatataagatgagtgtcac 13851143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 43888903 - 43888866
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  43888903 atgtgataacatatatagttgaatatgcataatacatg 43888866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 49423144 - 49423107
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  49423144 atgtgataacatatatagttgaatatgcataatacatg 49423107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 51427589 - 51427552
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  51427589 atgtgataacatatatagttgaatatgcataatacatg 51427552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 956842 - 956806
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  956842 atgtgataacatatatagttgaatatgcataatacat 956806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 25763388 - 25763424
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  25763388 atgtgataacatatatagttgaatatgcataatacat 25763424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 34152674 - 34152638
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  34152674 atgtgataacatatatagttgaatatgcataatacat 34152638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 44559715 - 44559679
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  44559715 atgtgataacatatatagttgaatatgcataatacat 44559679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 49571919 - 49571955
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  49571919 atgtgataacatatatagttgaatatgcataatacat 49571955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 232
Target Start/End: Complemental strand, 49791330 - 49791296
Alignment:
Q  198 tgataacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||||| |||||||||||||||    
T  49791330 tgataacatatatagttgaatatgcataatacatg 49791296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 20758704 - 20758631
Alignment:
Q  159 ctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||| | ||||| | |||| |||| ||||||||||| |||| |||||||| || | ||||||||    
T  20758704 ctttatgtgatgactcatcttatatgagggaattcgatgtgataacttatagagttgattttgtagaatacatg 20758631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 20765095 - 20765022
Alignment:
Q  159 ctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||| | ||||| | |||| |||| ||||||||||| |||| |||||||| || | ||||||||    
T  20765095 ctttatgtgatgactcatcttatatgagggaattcgatgtgataacttatagagttgattttgtagaatacatg 20765022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 21170270 - 21170303
Alignment:
Q  195 atgtgataacatatatagttgattatgcataata 228  Q
    |||||||||||||||||||||| |||||||||||    
T  21170270 atgtgataacatatatagttgaatatgcataata 21170303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 42887090 - 42887127
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  42887090 atgtgataacatatatagttgaatatgcataacacatg 42887127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 24607692 - 24607720
Alignment:
Q  189 aatttgatgtgataacatatatagttgat 217  Q
    |||||||||||||||||||||||||||||    
T  24607692 aatttgatgtgataacatatatagttgat 24607720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 36775906 - 36775870
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  36775906 atgtgataacatgtatagttgaatatgcataatacat 36775870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 45940333 - 45940369
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  45940333 atgtgataacatttatagttgaatatgcataatacat 45940369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 4e-46; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 13130859 - 13130729
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||||||    
T  13130859 taagttatgatatcaaattccttcatataagattagtgtcacagaatgcacctcattctttatgtgatgactcgtcttatatgaggaaatttgatgtgat 13130760  T
Q  202 aacatatatagttgattatgcataatacatg 232  Q
    | ||||||||||||||| || | ||||||||    
T  13130759 agcatatatagttgattttgtagaatacatg 13130729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 18921143 - 18921273
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||  |||||||||||||||||| |||||||||||||||||| |||||| |||||||| || ||||||| | |||| || | ||||||||    
T  18921143 taagttatgatattgaattccttcatataagatgagtgtcacagaatgcacctcattctctatgtgattactcgtcttatatgagggaaatcgatgtgat 18921242  T
Q  202 aacatatatagttgattatgcataatacatg 232  Q
    ||||||| ||| ||||| ||| | |||||||    
T  18921243 aacatatgtagctgattctgcgtgatacatg 18921273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 10398402 - 10398517
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| |||||||||||||||||| ||||||||  |||||||| || |||||||||||| || |||||||   ||   |||||||||||||    
T  10398402 taagttatgatatcgaattccttcatataagatgagtgtcacgaaatgcacctcaatctttatgtgatcactcgtcttatttgaatgaatttgatgtgat 10398501  T
Q  202 aacatatatagttgat 217  Q
    ||||||||||||||||    
T  10398502 aacatatatagttgat 10398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 12743660 - 12743727
Alignment:
Q  105 gttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgac 172  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  12743660 gttatgatatcgaattccttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgac 12743727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 12806481 - 12806548
Alignment:
Q  105 gttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgac 172  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  12806481 gttatgatatcgaattccttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgac 12806548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 36311723 - 36311672
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcacc 153  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  36311723 taagttatgatatcaaattccttcgtataagattagtgtcacagaattcacc 36311672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 33371562 - 33371618
Alignment:
Q  161 ttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgat 217  Q
    |||||||||||| ||||||| | || | |||||||||||||||||||||||||||||    
T  33371562 ttatgtgatgactcgtcttatatgaaggaatttgatgtgataacatatatagttgat 33371618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 17366322 - 17366249
Alignment:
Q  106 ttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtctta 180  Q
    |||||||||| |||||||||||||| ||| |||||||| ||||||||| || | |||||||||| || |||||||    
T  17366322 ttatgatatcgaattccttcatatacgatgagtgtcacggaatgcacctcagt-tttatgtgattactcgtctta 17366249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 1695604 - 1695641
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  1695604 atgtgataacatatatagttgaatatgcataatacatg 1695641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 4723467 - 4723430
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4723467 atgtgataacatatatagttgaatatgcataatacatg 4723430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 34683318 - 34683281
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34683318 atgtgataacatatatagttgaatatgcataatacatg 34683281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 36349726 - 36349689
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  36349726 atgtgataacatatatagttgaatatgcataatacatg 36349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 1972181 - 1972217
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  1972181 atgtgataacatatatagttgaatatgcataatacat 1972217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 6792864 - 6792828
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  6792864 atgtgataacatatatagttgaatatgcataatacat 6792828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 18309078 - 18309114
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  18309078 atgtgataacatatatagttgaatatgcataatacat 18309114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 35566090 - 35566127
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  35566090 atgtgataacatatatagttgaatatgcataacacatg 35566127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 36311567 - 36311494
Alignment:
Q  159 ctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||| | ||||| | || | |||| ||||| ||||||||||||||||||| || | ||||||||    
T  36311567 ctttatgtgatgactcatcttatatgaaggaattcgatgtcataacatatatagttgattttgtagaatacatg 36311494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 1399693 - 1399661
Alignment:
Q  195 atgtgataacatatatagttgattatgcataat 227  Q
    |||||||||||||||||||||| ||||||||||    
T  1399693 atgtgataacatatatagttgaatatgcataat 1399661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 25498901 - 25498937
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| |||| |||||||||    
T  25498901 atgtgataacatatatagttgaatatggataatacat 25498937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 9e-44; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 98 - 232
Target Start/End: Complemental strand, 25887202 - 25887068
Alignment:
Q  98 cttttaagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatg 197  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||||||| | ||   |||||||||    
T  25887202 cttttaagttatgatatcgaattccttcatataagatgagtgtcacagaatgcaactcattctttatgtgatgactcgtcttatatgattgaatttgatg 25887103  T
Q  198 tgataacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||||||| |||||||||||||    
T  25887102 tgataacatatatagttgattttgcataatacatg 25887068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 6754829 - 6754944
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||| | || | |||||||||||||    
T  6754829 taagttatgatatcaaattccttcatataagatgagtgtcacagaatgcaccttattctttatgtgatgactcgtcttatatgaaggaatttgatgtgat 6754928  T
Q  202 aacatatatagttgat 217  Q
    ||||||||||||||||    
T  6754929 aacatatatagttgat 6754944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 98 - 232
Target Start/End: Complemental strand, 20375474 - 20375340
Alignment:
Q  98 cttttaagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatg 197  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||  |||||||| |||||||||||||||||| ||||||| | |||| |||||||||    
T  20375474 cttttacgttatgatatcgaattccttcatataagatgagtgtcacgaaatgcacctcattctttatgtgatgactcgtcttatatgagggaatttgatg 20375375  T
Q  198 tgataacatatatagttgattatgcataatacatg 232  Q
    |||||| |||||||||||||| ||||| |||||||    
T  20375374 tgataatatatatagttgattttgcatgatacatg 20375340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 6463940 - 6463825
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||| ||||||| | || | |||||||||||||    
T  6463940 taagttatgatatcaaattccttcatataagatgagtgtcacggaatgcaccttattctttatgtgatgactcgtcttatatgaaggaatttgatgtgat 6463841  T
Q  202 aacatatatagttgat 217  Q
    ||||||||||||||||    
T  6463840 aacatatatagttgat 6463825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 14265669 - 14265777
Alignment:
Q  124 tcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgca 223  Q
    ||||||||||| ||||||||  |||| ||| |||||||||||| ||||| |||||||   |||| |||| ||||||||||||||||||||||||| ||||    
T  14265669 tcatataagatgagtgtcacgaaatggacctcattctttatgtaatgactcgtcttatttgagggaattcgatgtgataacatatatagttgattctgca 14265768  T
Q  224 taatacatg 232  Q
    |||||||||    
T  14265769 taatacatg 14265777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 7955224 - 7955278
Alignment:
Q  161 ttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttg 215  Q
    |||||||||||| ||||||| | || | |||||||||||||||||||||||||||    
T  7955224 ttatgtgatgactcgtcttatatgaaggaatttgatgtgataacatatatagttg 7955278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 34646610 - 34646573
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34646610 atgtgataacatatatagttgaatatgcataatacatg 34646573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 46413706 - 46413669
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  46413706 atgtgataacatatatagttgaatatgcataatacatg 46413669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 41578738 - 41578774
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  41578738 atgtgataacatatatagttgaatatgcataatacat 41578774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 43570694 - 43570730
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  43570694 atgtgataacatatatagttgaatatgcataatacat 43570730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 49274236 - 49274272
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  49274236 atgtgataacatatatagttgaatatgcataatacat 49274272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 230
Target Start/End: Complemental strand, 45099860 - 45099825
Alignment:
Q  195 atgtgataacatatatagttgattatgcataataca 230  Q
    |||||||||||||||||||||| |||||||||||||    
T  45099860 atgtgataacatatatagttgaatatgcataataca 45099825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 230
Target Start/End: Original strand, 51016088 - 51016123
Alignment:
Q  195 atgtgataacatatatagttgattatgcataataca 230  Q
    |||||||||||||||||||||| |||||||||||||    
T  51016088 atgtgataacatatatagttgaatatgcataataca 51016123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 27187889 - 27187926
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||||| | |||||||||||    
T  27187889 atgtgataacatatatagttgattctacataatacatg 27187926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 42322798 - 42322761
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  42322798 atgtgataacatatatagttgaatatgcatgatacatg 42322761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 14632269 - 14632305
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  14632269 atgtgataacgtatatagttgaatatgcataatacat 14632305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25887296 - 25887264
Alignment:
Q  1 gtaagacaattgttgtagttggaaggctctacc 33  Q
    |||||| ||||||||||||||||||||||||||    
T  25887296 gtaagataattgttgtagttggaaggctctacc 25887264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 30193364 - 30193400
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  30193364 atgtgataacatatatagttgaatatacataatacat 30193400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 46345997 - 46345961
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| || |||||||||||    
T  46345997 atgtgataacatatatagttgaataagcataatacat 46345961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 14482675 - 14482545
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| |||||||||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||| | || |||||| |||||||     
T  14482675 taagttatgatatcgaattccttcatataagatgagtgtcatagaatgcacctcattctttatgtgatgactcgtcttatatgaagaaattcgatgtgaa 14482576  T
Q  202 aacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||| |||||||||||||    
T  14482575 aacatatatagttgattctgcataatacatg 14482545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 20241964 - 20241849
Alignment:
Q  117 aattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttga 216  Q
    |||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||||| | |||| |||| ||||||||||||||||||| |||    
T  20241964 aatttcttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgactcgtcttatatgagggaattcgatgtgataacatatatagatga 20241865  T
Q  217 ttatgcataatacatg 232  Q
    || |||||||||||||    
T  20241864 ttgtgcataatacatg 20241849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 22135948 - 22135833
Alignment:
Q  117 aattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttga 216  Q
    |||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||||| | |||| |||| ||||||||||||||||||| |||    
T  22135948 aatttcttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgactcgtcttatatgagggaattcgatgtgataacatatatagatga 22135849  T
Q  217 ttatgcataatacatg 232  Q
    || |||||||||||||    
T  22135848 ttgtgcataatacatg 22135833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 22143301 - 22143186
Alignment:
Q  117 aattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttga 216  Q
    |||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||||| | |||| |||| ||||||||||||||||||| |||    
T  22143301 aatttcttcatataagatgagtgtcacggaatgcacctcattctttatgtgatgactcgtcttatatgagggaattcgatgtgataacatatatagatga 22143202  T
Q  217 ttatgcataatacatg 232  Q
    || |||||||||||||    
T  22143201 ttgtgcataatacatg 22143186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 23911404 - 23911515
Alignment:
Q  106 ttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataaca 205  Q
    |||||||||| |||||||||||||||||| ||||||||  |||||||| |||||||||||||||||| ||||||| | || | |||||||||||||||||    
T  23911404 ttatgatatcgaattccttcatataagatgagtgtcacgaaatgcacctcattctttatgtgatgactcgtcttatacgaaggaatttgatgtgataaca 23911503  T
Q  206 tatatagttgat 217  Q
    ||||||||||||    
T  23911504 tatatagttgat 23911515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 17465065 - 17464951
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||| | | ||| | |||| |||| ||  ||||    
T  17465065 taagttatgatatcgaattccttcatataagatgagtgtcacggaatgcacctcattcattatgtgatgactcatattatatgagggaattcga--tgat 17464968  T
Q  202 aacatatatagttgatt 218  Q
    |||||||||||||||||    
T  17464967 aacatatatagttgatt 17464951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 4495703 - 4495742
Alignment:
Q  193 tgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  4495703 tgatgtgataacatatatagttgaatatgcataatacatg 4495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 12397600 - 12397637
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  12397600 atgtgataacatatatagttgaatatgcataatacatg 12397637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 30256983 - 30256946
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  30256983 atgtgataacatatatagttgaatatgcataatacatg 30256946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 34802577 - 34802540
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34802577 atgtgataacatatatagttgaatatgcataatacatg 34802540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 7821396 - 7821433
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  7821396 atgtgacaacatatatagttgaatatgcataatacatg 7821433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 32027013 - 32026976
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  32027013 atgttataacatatatagttgaatatgcataatacatg 32026976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 32037072 - 32037035
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  32037072 atgttataacatatatagttgaatatgcataatacatg 32037035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 13403629 - 13403665
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||| | ||||||||||||||    
T  13403629 atgtgataacatatatagttaaatatgcataatacat 13403665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 5e-39; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 1642184 - 1642054
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||  || | ||||||||||||||||||||| | |||| |||||||| ||||    
T  1642184 taagttatgatatcaaattccttcatataagatgagtgcaacagaatgcacatcactttttatgtgatgacccgtcttatatgagggaatttgatatgat 1642085  T
Q  202 aacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||| |||||||||||||    
T  1642084 aacatatatagttgattctgcataatacatg 1642054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 4230130 - 4230244
Alignment:
Q  117 aattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttga 216  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||| ||||||| | |||| |||| |||||||||||||||||||||||    
T  4230130 aattccttcatataagatgagtgtcacagaatggacctcattctttatgcgatgactcgtcttatatgagggaattcgatgtgataacatatatagttga 4230229  T
Q  217 ttatgcataatacat 231  Q
    | |||| ||||||||    
T  4230230 taatgcgtaatacat 4230244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 18149935 - 18150064
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| ||||||| |||||||||  |  ||||||||||||||| |||||||||||||||||| ||| ||| |||| | ||||  || ||||    
T  18149935 taagttatgatatcgaattcctccatataagaggaaagtcacagaatgcacctcattctttatgtgatgactcgttttataagacggaattcaatttgat 18150034  T
Q  202 aacatatatagttgattatgcataatacat 231  Q
    |||||||| |||||||| || | |||||||    
T  18150035 aacatatacagttgattttgtagaatacat 18150064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 3380441 - 3380347
Alignment:
Q  138 tgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||| ||||||||| ||| |||||||||||||| ||||||| | |||| |||| ||||||||||||||||||||| ||| || | ||||||||    
T  3380441 tgtcacggaatgcacctcatgctttatgtgatgactcgtcttatatgagggaattcgatgtgataacatatatagtttattttgtagaatacatg 3380347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 11826436 - 11826522
Alignment:
Q  145 gaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgcataatacat 231  Q
    ||||||||| |||||||||| ||||||| | ||||| | |||| |||| |||||||||||||||||||||||||||| | |||||||    
T  11826436 gaatgcacctcattctttatatgatgactcatcttatatgaggtaattcgatgtgataacatatatagttgattatgtaaaatacat 11826522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 21614056 - 21614000
Alignment:
Q  161 ttatgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgat 217  Q
    |||||||||||| ||||||| | || | |||||||||||||||||||||||||||||    
T  21614056 ttatgtgatgactcgtcttatatgaaggaatttgatgtgataacatatatagttgat 21614000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 150496 - 150547
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcacc 153  Q
    |||||||||||||| |||||||| ||||||||| |||||||| |||||||||    
T  150496 taagttatgatatcgaattccttaatataagatgagtgtcacggaatgcacc 150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 31267478 - 31267435
Alignment:
Q  189 aatttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  31267478 aattcgatgtgataacatatatagatgattatgcataatacatg 31267435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 10224888 - 10224924
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  10224888 atgtgataacatatatagttgaatatgcataatacat 10224924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 22291650 - 22291686
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  22291650 atgtgataacatatatagttgaatatgcataatacat 22291686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 41622900 - 41622936
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  41622900 atgtgataacatatatagttgaatatgcataatacat 41622936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 48271470 - 48271506
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  48271470 atgtgataacatatatagttgaatatgcataatacat 48271506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 20877447 - 20877410
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  20877447 atgtgataccatatatagttgaatatgcataatacatg 20877410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 28113789 - 28113752
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  28113789 atgtgataacatatatagttgaatatgtataatacatg 28113752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 42735783 - 42735820
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  42735783 atgtgataaaatatatagttgaatatgcataatacatg 42735820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 150657 - 150725
Alignment:
Q  164 tgtgatgacccgtcttagaagaggaaatttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||  |||||| | |||| |||| |||||||||||||||||| |||||| || | ||||||||    
T  150657 tgtgatgacttgtcttatatgagggaattcgatgtgataacatatataattgattttgtagaatacatg 150725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 11825081 - 11825121
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtca 142  Q
    |||||||||||||| |||| ||||||||||||| |||||||    
T  11825081 taagttatgatatcgaatttcttcatataagatgagtgtca 11825121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 42683222 - 42683258
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  42683222 atgtgataacatatatagttgaatatgcatgatacat 42683258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 16531680 - 16531554
Alignment:
Q  106 ttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgataaca 205  Q
    |||||||||| |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||| ||| ||||| | |||| |||||||||||||||||    
T  16531680 ttatgatatcgaattccttgatataagatgagtgccacagaatgcacctcattctttatgtgatggcccatcttatatgagggaatttgatgtgataaca 16531581  T
Q  206 tatatagttgattatgcataatacatg 232  Q
    ||||||||||||| || ||||||||||    
T  16531580 tatatagttgattttgtataatacatg 16531554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 18843068 - 18843183
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| |||| ||||||||||||| |||||||| ||||||||| || ||||||||||||||| ||||||| | || | |||||||||||||    
T  18843068 taagttatgatatcgaatttcttcatataagatgagtgtcacggaatgcacctcagtctttatgtgatgactcgtcttatatgaaggaatttgatgtgat 18843167  T
Q  202 aacatatatagttgat 217  Q
    ||| ||||||||||||    
T  18843168 aacgtatatagttgat 18843183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 5766107 - 5766220
Alignment:
Q  102 taagttatgatatcaaattccttcatataagataagtgtcacagaatgcaccacattctttatgtgatgacccgtcttagaagaggaaatttgatgtgat 201  Q
    |||||||||||||| |||||||||||||||  | |||||||||||||||||| || |||||||||||| || ||||||| | || | ||||||| |||||    
T  5766107 taagttatgatatcgaattccttcatataa--tgagtgtcacagaatgcacctcagtctttatgtgattactcgtcttatatgaaggaatttgaggtgat 5766204  T
Q  202 aacatatatagttgat 217  Q
    || |||||||||||||    
T  5766205 aatatatatagttgat 5766220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 12790669 - 12790632
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  12790669 atgtgataacatatatagttgaatatgcataatacatg 12790632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 17373291 - 17373328
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  17373291 atgtgataacatatatagtagattatgcataatacatg 17373328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 23343460 - 23343497
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  23343460 atgtgataacatatatagttgaatatgcataatacatg 23343497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 35525583 - 35525546
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  35525583 atgtgataacatatatagttgaatatgcataatacatg 35525546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 35586309 - 35586272
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  35586309 atgtgataacatatatagttgaatatgcataatacatg 35586272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 36910370 - 36910407
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  36910370 atgtgataacatatatagttgaatatgcataatacatg 36910407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 40532801 - 40532764
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  40532801 atgtgataacatatatagttgaatatgcataatacatg 40532764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 6436532 - 6436568
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  6436532 atgtgataacatatatagttgaatatgcataatacat 6436568  T

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Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 13973744 - 13973780
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  13973744 atgtgataacatatatagttgaatatgcataatacat 13973780  T

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Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 42571178 - 42571142
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  42571178 atgtgataacatatatagttgaatatgcataatacat 42571142  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 49261093 - 49261057
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  49261093 atgtgataacatatatagttgaatatgcataatacat 49261057  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 14173144 - 14173107
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  14173144 atgtgataacatatatagttgaatatgcatgatacatg 14173107  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 35185793 - 35185830
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  35185793 atgtgacaacatatatagttgaatatgcataatacatg 35185830  T

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Target: chr8 (Bit Score: 56; Significance: 7e-23; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 461 - 593
Target Start/End: Complemental strand, 16912226 - 16912092
Alignment:
Q  461 ctcccttatgagcttaacaccattaactaaattgttaaacatccatctaattttacatttgacggtaactttcataagatctcttaaaattgataaaaac 560  Q
    ||||||||||| ||||||| | |||| ||||  ||||||||||| |||||||||||||||||||||||| | | |||| ||||||||||| |||| ||||    
T  16912226 ctcccttatgaacttaacatcgttaattaaaccgttaaacatccttctaattttacatttgacggtaacatccctaaggtctcttaaaatagatataaac 16912127  T
Q  561 --caaccttcctaacctaacattattattgttact 593  Q
       |||||| ||| | |||||||||||||||||||    
T  16912126 tataaccttactagcttaacattattattgttact 16912092  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 28167612 - 28167649
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28167612 atgtgataacatatatagttgaatatgcataatacatg 28167649  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 26487261 - 26487297
Alignment:
Q  196 tgtgataacatatatagttgattatgcataatacatg 232  Q
    ||||||||||||||||||||| |||||||||||||||    
T  26487261 tgtgataacatatatagttgaatatgcataatacatg 26487297  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 18439689 - 18439656
Alignment:
Q  195 atgtgataacatatatagttgattatgcataata 228  Q
    |||||||||||||||||||||| |||||||||||    
T  18439689 atgtgataacatatatagttgaatatgcataata 18439656  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 42168356 - 42168320
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  42168356 atgtgataacatatatggttgaatatgcataatacat 42168320  T

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Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 107898 - 107857
Alignment:
Q  191 tttgatgtgataacatatatagttgattatgcataatacatg 232  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  107898 tttgatgtgataacatatatagttgattatgcataacacatg 107857  T

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Target: scaffold0589 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 5094 - 5130
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  5094 atgtgataacatatatagttgaatatgcataatacat 5130  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 17346 - 17309
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacatg 232  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  17346 atgtgatcacatatatagttgaatatgcataatacatg 17309  T

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Target: scaffold0618 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 4954 - 4918
Alignment:
Q  195 atgtgataacatatatagttgattatgcataatacat 231  Q
    |||||||||||||||||||||| || |||||||||||    
T  4954 atgtgataacatatatagttgaataagcataatacat 4918  T

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