View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4375-Insertion-5 (Length: 1045)

Name: NF4375-Insertion-5
Description: NF4375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4375-Insertion-5
NF4375-Insertion-5
[»] chr7 (58 HSPs)
chr7 (8-714)||(36772220-36772932)
chr7 (748-1040)||(36771919-36772223)
chr7 (8-194)||(36770497-36770688)
chr7 (460-627)||(22119911-22120090)
chr7 (460-627)||(40542909-40543088)
chr7 (460-626)||(7275300-7275478)
chr7 (460-627)||(2751294-2751473)
chr7 (460-627)||(21835174-21835353)
chr7 (460-627)||(7175861-7176040)
chr7 (460-627)||(11997872-11998051)
chr7 (460-626)||(18044130-18044308)
chr7 (479-627)||(654704-654863)
chr7 (460-627)||(22703509-22703688)
chr7 (460-627)||(27312175-27312354)
chr7 (460-550)||(23012595-23012686)
chr7 (460-627)||(28089839-28090021)
chr7 (469-626)||(17196950-17197119)
chr7 (460-627)||(21217832-21218011)
chr7 (460-550)||(2103078-2103169)
chr7 (460-550)||(10091211-10091302)
chr7 (460-620)||(17212076-17212248)
chr7 (460-550)||(27009382-27009473)
chr7 (477-627)||(29861711-29861872)
chr7 (469-550)||(9683858-9683940)
chr7 (469-550)||(42814896-42814978)
chr7 (460-550)||(7799919-7800010)
chr7 (460-550)||(13332510-13332601)
chr7 (477-627)||(16374034-16374196)
chr7 (460-550)||(19421254-19421345)
chr7 (460-627)||(31197614-31197792)
chr7 (460-627)||(42913512-42913691)
chr7 (469-627)||(31273946-31274115)
chr7 (469-550)||(32849623-32849705)
chr7 (469-626)||(39145652-39145821)
chr7 (470-550)||(14199753-14199834)
chr7 (460-627)||(2344322-2344501)
chr7 (547-626)||(3851878-3851958)
chr7 (515-627)||(23092175-23092298)
chr7 (460-550)||(27704025-27704116)
chr7 (567-626)||(31712902-31712961)
chr7 (460-533)||(22299872-22299946)
chr7 (494-626)||(41907514-41907657)
chr7 (469-551)||(22696352-22696433)
chr7 (460-619)||(43785306-43785477)
chr7 (473-550)||(9718074-9718152)
chr7 (581-627)||(22299958-22300004)
chr7 (477-550)||(28950911-28950985)
chr7 (577-626)||(22696473-22696522)
chr7 (576-625)||(32849742-32849791)
chr7 (514-550)||(21373788-21373824)
chr7 (547-625)||(22638409-22638488)
chr7 (576-615)||(25333554-25333593)
chr7 (469-547)||(28647001-28647079)
chr7 (580-619)||(36395501-36395540)
chr7 (460-548)||(12211625-12211713)
chr7 (473-551)||(21574189-21574268)
chr7 (460-509)||(23854419-23854468)
chr7 (651-680)||(36772254-36772283)
[»] chr6 (29 HSPs)
chr6 (469-627)||(14212920-14213080)
chr6 (460-627)||(3222635-3222812)
chr6 (469-626)||(654146-654315)
chr6 (460-627)||(15360097-15360276)
chr6 (460-627)||(34147365-34147544)
chr6 (460-627)||(34159981-34160160)
chr6 (460-626)||(11448890-11449068)
chr6 (460-627)||(21148510-21148688)
chr6 (460-625)||(9238994-9239171)
chr6 (460-550)||(17081141-17081232)
chr6 (469-626)||(28672095-28672264)
chr6 (460-627)||(21982320-21982498)
chr6 (460-550)||(5360158-5360249)
chr6 (469-627)||(1344963-1345133)
chr6 (460-550)||(12591656-12591747)
chr6 (473-626)||(9690638-9690803)
chr6 (460-627)||(9843957-9844136)
chr6 (460-546)||(13753259-13753346)
chr6 (481-550)||(12390465-12390535)
chr6 (469-548)||(9208280-9208359)
chr6 (479-626)||(11840939-11841097)
chr6 (460-546)||(28968133-28968220)
chr6 (460-627)||(11007184-11007363)
chr6 (469-626)||(33718469-33718627)
chr6 (460-547)||(31039039-31039127)
chr6 (469-548)||(17149546-17149625)
chr6 (576-616)||(20836970-20837010)
chr6 (576-626)||(5360071-5360121)
chr6 (460-544)||(33499493-33499578)
[»] chr5 (50 HSPs)
chr5 (460-627)||(19456210-19456387)
chr5 (460-627)||(8484660-8484839)
chr5 (469-626)||(11926501-11926671)
chr5 (470-627)||(27498730-27498899)
chr5 (469-619)||(38684236-38684397)
chr5 (469-627)||(18207235-18207405)
chr5 (470-619)||(11464915-11465075)
chr5 (460-627)||(7085625-7085804)
chr5 (460-627)||(15641105-15641283)
chr5 (460-619)||(33709510-33709679)
chr5 (460-627)||(38630978-38631139)
chr5 (460-627)||(32059439-32059618)
chr5 (460-627)||(22392720-22392886)
chr5 (460-550)||(25586951-25587042)
chr5 (512-619)||(35425085-35425203)
chr5 (460-550)||(37495066-37495157)
chr5 (470-550)||(34310171-34310252)
chr5 (469-618)||(13038463-13038623)
chr5 (460-627)||(30485847-30486026)
chr5 (469-627)||(10869564-10869734)
chr5 (460-618)||(13108458-13108627)
chr5 (547-627)||(41351103-41351183)
chr5 (460-550)||(1827617-1827708)
chr5 (460-627)||(4603796-4603975)
chr5 (473-618)||(27487562-27487720)
chr5 (460-550)||(15971209-15971300)
chr5 (469-547)||(36954846-36954925)
chr5 (549-626)||(22693054-22693132)
chr5 (460-548)||(7151348-7151437)
chr5 (459-550)||(6014367-6014459)
chr5 (460-627)||(31287945-31288124)
chr5 (567-627)||(37495192-37495252)
chr5 (576-627)||(10631288-10631339)
chr5 (460-550)||(12398535-12398626)
chr5 (469-551)||(19145498-19145580)
chr5 (469-626)||(42193513-42193680)
chr5 (469-548)||(15931087-15931166)
chr5 (469-627)||(21236361-21236531)
chr5 (460-626)||(23270522-23270700)
chr5 (576-626)||(28614486-28614536)
chr5 (472-544)||(15485385-15485457)
chr5 (460-512)||(37397732-37397784)
chr5 (547-626)||(5049254-5049333)
chr5 (470-540)||(12317247-12317318)
chr5 (567-626)||(19145412-19145471)
chr5 (576-627)||(25548533-25548584)
chr5 (460-549)||(22253233-22253323)
chr5 (460-510)||(34049841-34049891)
chr5 (576-626)||(34310289-34310339)
chr5 (558-615)||(5067390-5067447)
[»] chr3 (65 HSPs)
chr3 (460-627)||(15566499-15566677)
chr3 (469-626)||(52821636-52821804)
chr3 (460-627)||(10190741-10190920)
chr3 (460-627)||(10083818-10083997)
chr3 (460-627)||(25289714-25289892)
chr3 (460-626)||(49258262-49258440)
chr3 (460-627)||(53424176-53424354)
chr3 (460-626)||(35492930-35493108)
chr3 (460-627)||(30807152-30807331)
chr3 (469-626)||(39041852-39042021)
chr3 (460-627)||(8456149-8456328)
chr3 (460-627)||(45272415-45272594)
chr3 (460-627)||(46576367-46576546)
chr3 (460-627)||(53233910-53234088)
chr3 (460-618)||(25379780-25379950)
chr3 (460-627)||(26174132-26174311)
chr3 (460-627)||(40133448-40133627)
chr3 (460-550)||(26108311-26108402)
chr3 (460-627)||(45529754-45529932)
chr3 (460-550)||(40940844-40940935)
chr3 (469-627)||(48977416-48977586)
chr3 (469-618)||(18176895-18177056)
chr3 (469-626)||(21362971-21363140)
chr3 (481-627)||(8097278-8097436)
chr3 (460-550)||(31537925-31538016)
chr3 (469-627)||(52455648-52455818)
chr3 (469-550)||(7470302-7470384)
chr3 (547-627)||(24165714-24165794)
chr3 (460-619)||(30257643-30257814)
chr3 (460-550)||(34492662-34492753)
chr3 (469-626)||(7485531-7485694)
chr3 (469-550)||(29915356-29915438)
chr3 (469-550)||(29964509-29964591)
chr3 (469-626)||(32151452-32151621)
chr3 (469-537)||(19857079-19857148)
chr3 (567-627)||(53848433-53848493)
chr3 (567-626)||(24407399-24407458)
chr3 (469-627)||(25344057-25344226)
chr3 (469-619)||(33398475-33398637)
chr3 (494-627)||(2511296-2511441)
chr3 (473-550)||(51532821-51532899)
chr3 (470-546)||(1692863-1692940)
chr3 (578-627)||(3747730-3747779)
chr3 (460-619)||(26158837-26159001)
chr3 (547-626)||(54475798-54475878)
chr3 (476-550)||(53288799-53288874)
chr3 (576-626)||(4048097-4048147)
chr3 (470-547)||(6041762-6041840)
chr3 (469-550)||(11390630-11390712)
chr3 (469-542)||(25017543-25017617)
chr3 (473-534)||(40777052-40777114)
chr3 (494-550)||(17579223-17579280)
chr3 (570-627)||(32094756-32094813)
chr3 (547-627)||(1178289-1178368)
chr3 (515-551)||(1242048-1242084)
chr3 (546-626)||(4462749-4462829)
chr3 (547-618)||(55371302-55371374)
chr3 (567-626)||(50731237-50731296)
chr3 (567-626)||(50781558-50781617)
chr3 (576-618)||(4252404-4252446)
chr3 (579-625)||(48105027-48105073)
chr3 (460-552)||(4252482-4252574)
chr3 (547-627)||(33698705-33698786)
chr3 (460-544)||(49167075-49167160)
chr3 (470-550)||(55287832-55287913)
[»] chr1 (55 HSPs)
chr1 (469-625)||(17935797-17935965)
chr1 (460-627)||(4621236-4621415)
chr1 (460-626)||(24122042-24122220)
chr1 (460-619)||(24674412-24674583)
chr1 (460-627)||(7578428-7578607)
chr1 (469-627)||(7766726-7766896)
chr1 (470-627)||(15059401-15059570)
chr1 (460-619)||(45859050-45859221)
chr1 (460-550)||(8077666-8077757)
chr1 (469-550)||(30677204-30677286)
chr1 (469-550)||(46607838-46607920)
chr1 (460-627)||(27454863-27455044)
chr1 (460-550)||(9500442-9500533)
chr1 (460-550)||(37351548-37351639)
chr1 (460-627)||(23734135-23734315)
chr1 (460-627)||(23741327-23741507)
chr1 (469-544)||(46113495-46113571)
chr1 (460-626)||(7197247-7197424)
chr1 (460-550)||(7946863-7946954)
chr1 (469-550)||(36155975-36156057)
chr1 (460-547)||(33905600-33905688)
chr1 (460-625)||(34778361-34778535)
chr1 (469-547)||(25237080-25237158)
chr1 (469-619)||(1378926-1379087)
chr1 (469-550)||(23232352-23232434)
chr1 (460-544)||(18646872-18646957)
chr1 (469-544)||(809250-809325)
chr1 (460-627)||(32729564-32729742)
chr1 (460-550)||(168220-168311)
chr1 (469-550)||(8779823-8779905)
chr1 (469-550)||(18533811-18533893)
chr1 (472-549)||(39964543-39964621)
chr1 (469-544)||(2272372-2272448)
chr1 (471-550)||(21726759-21726839)
chr1 (575-626)||(5315477-5315528)
chr1 (580-627)||(14603947-14603994)
chr1 (8-83)||(16749153-16749228)
chr1 (494-551)||(16539661-16539718)
chr1 (469-530)||(20487297-20487359)
chr1 (576-626)||(23041669-23041719)
chr1 (548-626)||(26513148-26513226)
chr1 (549-627)||(27159205-27159283)
chr1 (548-626)||(40802069-40802147)
chr1 (460-551)||(1138598-1138689)
chr1 (472-551)||(37047023-37047102)
chr1 (469-551)||(19034473-19034555)
chr1 (567-618)||(40145889-40145940)
chr1 (507-550)||(40145973-40146016)
chr1 (519-550)||(45331709-45331740)
chr1 (576-618)||(8779744-8779786)
chr1 (567-625)||(37351454-37351512)
chr1 (547-627)||(8254751-8254832)
chr1 (470-550)||(32930778-32930859)
chr1 (547-627)||(48699876-48699957)
chr1 (472-548)||(49101730-49101806)
[»] chr8 (47 HSPs)
chr8 (460-627)||(39349279-39349458)
chr8 (460-627)||(4718668-4718847)
chr8 (460-627)||(34237654-34237833)
chr8 (460-627)||(19471632-19471812)
chr8 (460-627)||(19542556-19542736)
chr8 (460-627)||(19589960-19590140)
chr8 (460-625)||(28193497-28193674)
chr8 (459-627)||(8765525-8765705)
chr8 (460-627)||(3734622-3734801)
chr8 (460-626)||(21603253-21603431)
chr8 (469-626)||(42643118-42643287)
chr8 (460-627)||(2618209-2618388)
chr8 (460-627)||(14632977-14633156)
chr8 (459-626)||(20469939-20470117)
chr8 (460-627)||(42328028-42328206)
chr8 (469-627)||(32879311-32879481)
chr8 (469-550)||(15259493-15259575)
chr8 (469-550)||(27746422-27746504)
chr8 (460-550)||(264486-264577)
chr8 (460-550)||(651344-651435)
chr8 (460-550)||(837079-837170)
chr8 (460-546)||(18532130-18532217)
chr8 (547-627)||(2639410-2639491)
chr8 (469-625)||(7557952-7558112)
chr8 (460-627)||(20305931-20306110)
chr8 (460-627)||(21092564-21092743)
chr8 (469-627)||(4698722-4698892)
chr8 (469-550)||(26168936-26169017)
chr8 (469-550)||(2166731-2166811)
chr8 (494-550)||(6953094-6953151)
chr8 (547-626)||(25248469-25248547)
chr8 (460-551)||(34639294-34639384)
chr8 (469-550)||(24018414-24018496)
chr8 (547-626)||(18128634-18128714)
chr8 (469-532)||(15974937-15975000)
chr8 (460-550)||(34610774-34610865)
chr8 (469-550)||(9047365-9047447)
chr8 (580-626)||(9713609-9713655)
chr8 (469-550)||(28088318-28088400)
chr8 (472-534)||(40136938-40137000)
chr8 (469-549)||(28964065-28964146)
chr8 (567-626)||(2166838-2166897)
chr8 (515-550)||(21667629-21667664)
chr8 (580-627)||(33747037-33747084)
chr8 (580-627)||(34610686-34610733)
chr8 (576-626)||(6953008-6953057)
chr8 (468-532)||(34694681-34694746)
[»] chr4 (51 HSPs)
chr4 (460-627)||(40058851-40059030)
chr4 (469-627)||(34844757-34844927)
chr4 (460-625)||(52983638-52983815)
chr4 (460-624)||(20077986-20078162)
chr4 (460-627)||(27528794-27528973)
chr4 (460-627)||(32986216-32986395)
chr4 (460-627)||(46714411-46714591)
chr4 (460-626)||(33696279-33696457)
chr4 (496-626)||(34723854-34723996)
chr4 (469-619)||(43719094-43719234)
chr4 (460-627)||(19660531-19660710)
chr4 (460-550)||(25852233-25852324)
chr4 (469-618)||(49287886-49288046)
chr4 (460-627)||(54127341-54127520)
chr4 (460-550)||(22625157-22625248)
chr4 (469-550)||(13550236-13550318)
chr4 (460-627)||(5609201-5609380)
chr4 (473-625)||(20527035-20527198)
chr4 (460-626)||(20566368-20566547)
chr4 (460-550)||(35229187-35229277)
chr4 (473-627)||(36131509-36131675)
chr4 (494-627)||(32990488-32990633)
chr4 (469-550)||(33992654-33992736)
chr4 (460-547)||(1985855-1985943)
chr4 (494-617)||(9517650-9517785)
chr4 (460-627)||(44343533-44343712)
chr4 (460-550)||(35674828-35674919)
chr4 (469-550)||(12500145-12500227)
chr4 (470-627)||(45787703-45787871)
chr4 (569-626)||(55158343-55158400)
chr4 (495-627)||(18875516-18875659)
chr4 (469-547)||(13873385-13873464)
chr4 (460-550)||(32942389-32942480)
chr4 (567-617)||(4064998-4065048)
chr4 (576-626)||(23639771-23639821)
chr4 (576-626)||(23645429-23645479)
chr4 (460-549)||(34835548-34835638)
chr4 (470-550)||(2351042-2351123)
chr4 (582-627)||(21387486-21387531)
chr4 (469-550)||(51535641-51535727)
chr4 (460-547)||(7392054-7392141)
chr4 (460-551)||(41621683-41621774)
chr4 (515-550)||(29875862-29875897)
chr4 (567-626)||(52494626-52494685)
chr4 (515-550)||(55961840-55961875)
chr4 (473-550)||(13584341-13584419)
chr4 (567-619)||(37302625-37302677)
chr4 (567-626)||(25852353-25852412)
chr4 (576-619)||(35229315-35229358)
chr4 (473-535)||(37455609-37455671)
chr4 (578-627)||(23131435-23131484)
[»] chr2 (51 HSPs)
chr2 (469-626)||(25293194-25293356)
chr2 (460-627)||(44946052-44946231)
chr2 (460-627)||(33827572-33827751)
chr2 (472-627)||(35171831-35171998)
chr2 (460-550)||(10582077-10582168)
chr2 (469-627)||(15037987-15038157)
chr2 (470-550)||(17324795-17324876)
chr2 (460-627)||(34516413-34516586)
chr2 (460-626)||(11941210-11941388)
chr2 (460-550)||(27290607-27290698)
chr2 (460-626)||(13266509-13266686)
chr2 (469-627)||(41314020-41314189)
chr2 (460-547)||(1191532-1191620)
chr2 (460-627)||(36242311-36242490)
chr2 (460-627)||(24196023-24196200)
chr2 (473-626)||(30466830-30466995)
chr2 (515-627)||(3943815-3943938)
chr2 (515-627)||(28668948-28669071)
chr2 (460-547)||(44976244-44976332)
chr2 (469-604)||(32845119-32845251)
chr2 (460-547)||(5394036-5394124)
chr2 (460-550)||(4567524-4567615)
chr2 (460-550)||(43374412-43374503)
chr2 (469-546)||(8258925-8259003)
chr2 (534-627)||(14486929-14487023)
chr2 (567-627)||(2140485-2140545)
chr2 (459-550)||(19054043-19054135)
chr2 (576-627)||(4567428-4567479)
chr2 (460-550)||(45271403-45271494)
chr2 (494-547)||(23787098-23787152)
chr2 (549-626)||(4852649-4852726)
chr2 (460-551)||(8192438-8192529)
chr2 (567-627)||(18692098-18692158)
chr2 (567-627)||(19054164-19054224)
chr2 (567-627)||(39957896-39957956)
chr2 (460-538)||(6714380-6714459)
chr2 (460-539)||(18976524-18976603)
chr2 (576-627)||(43374329-43374380)
chr2 (469-550)||(40997437-40997519)
chr2 (460-548)||(28194223-28194311)
chr2 (460-548)||(40591202-40591290)
chr2 (578-619)||(45132436-45132477)
chr2 (567-619)||(18976462-18976514)
chr2 (460-547)||(19605936-19606023)
chr2 (515-550)||(918784-918819)
chr2 (567-626)||(27269344-27269403)
chr2 (584-627)||(27290729-27290772)
chr2 (476-550)||(36390655-36390730)
chr2 (576-626)||(44929846-44929896)
chr2 (578-627)||(1501463-1501511)
chr2 (460-552)||(29698166-29698258)
[»] scaffold0217 (1 HSPs)
scaffold0217 (460-626)||(7309-7487)
[»] scaffold0576 (1 HSPs)
scaffold0576 (460-627)||(5081-5260)
[»] scaffold0070 (1 HSPs)
scaffold0070 (460-627)||(40344-40522)
[»] scaffold0019 (1 HSPs)
scaffold0019 (460-627)||(161828-162007)
[»] scaffold0026 (1 HSPs)
scaffold0026 (460-626)||(97366-97544)
[»] scaffold0051 (1 HSPs)
scaffold0051 (460-627)||(52870-53049)
[»] scaffold0623 (1 HSPs)
scaffold0623 (460-550)||(1143-1234)
[»] scaffold0366 (2 HSPs)
scaffold0366 (460-550)||(9386-9477)
scaffold0366 (460-550)||(12087-12178)
[»] scaffold0102 (1 HSPs)
scaffold0102 (480-627)||(39131-39290)
[»] scaffold0459 (1 HSPs)
scaffold0459 (460-550)||(10780-10871)
[»] scaffold0068 (1 HSPs)
scaffold0068 (469-627)||(41644-41813)
[»] scaffold0717 (1 HSPs)
scaffold0717 (460-547)||(48-136)
[»] scaffold0328 (2 HSPs)
scaffold0328 (469-550)||(15019-15101)
scaffold0328 (515-626)||(13047-13166)
[»] scaffold0157 (1 HSPs)
scaffold0157 (469-550)||(20250-20332)
[»] scaffold0049 (1 HSPs)
scaffold0049 (460-626)||(66781-66951)
[»] scaffold0016 (1 HSPs)
scaffold0016 (517-627)||(32365-32485)
[»] scaffold0199 (2 HSPs)
scaffold0199 (567-626)||(8451-8510)
scaffold0199 (460-532)||(8512-8585)
[»] scaffold0020 (1 HSPs)
scaffold0020 (516-626)||(123066-123172)
[»] scaffold0460 (1 HSPs)
scaffold0460 (469-530)||(8286-8348)
[»] scaffold0200 (1 HSPs)
scaffold0200 (580-623)||(26605-26648)


Alignment Details
Target: chr7 (Bit Score: 530; Significance: 0; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 530; E-Value: 0
Query Start/End: Original strand, 8 - 714
Target Start/End: Complemental strand, 36772932 - 36772220
Alignment:
Q  8 aagggaatgttaattgggcaatagaatttgaaattagcatatagtttttcatgtggtgattttggttcatatgtgtctgttgttgggggatgaaggtttt 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36772932 aagggaaggttaattgggcaatagaatttgaaattagcatatagtttttcatgtggtgattttggttcatatgtgtctgttgttgggg-atgaaggtttt 36772834  T
Q  108 gaggttggtattctttgtgtagttccaagatttgccataaaagcattgaaatggaaattggaaaatcaaagaatggatcaattgaaagagcttctgatga 207  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36772833 gaagttggtattctttgtgtagttccaagatttgccataaaagctttgaaatggaaattggaaaatcaaagaatggatcaattgaaagagcttctgatga 36772734  T
Q  208 acacaaaatttatttgagaaatttgttccaaatgttttccacaacttatgtggattagacttgtatctgtttaatgcttgatatacatatataaaatcca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36772733 acacaaaatttatttgagaaatttgttccaaatgttttccacaacttatgtggattagacttgtatctgtttaatgcttgatatacatatataaaatcca 36772634  T
Q  308 gagaggacatcaaattcttcattcacgcagactttcaaaattaaatttaaaaacaagtcaaataatcttagaataatttgcaagtcaattttcgtttggc 407  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36772633 gaggggacatcaaattcttcattcacgcagactttcaaaattaaatttaaaaacaagtcaaataatcttagaataatttgcaagtcaattttcgtttggc 36772534  T
Q  408 ccttctagttgtctatattatagattattagtatcaactatattatagattattggc-ttttgatcttggagtttgctcctctagatgtctcaggtttga 506  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  36772533 ccttctagttgtctatattatagattattagtgtcaactatattatagattattggctttttgatcttggagtttgctcctctagaggtctcaggtttga 36772434  T
Q  507 -ttcccctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg-ccccgggagtgggtgatgggattggtcctctcgga 594  Q
     |||||||| |||||||||||||||||||||| ||||||||          ||||||||||||| ||||||||||||| | ||| ||| |||||||||||    
T  36772433 tttccccta-tgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcgga 36772335  T
Q  595 ttagtcgatttttggatcggataccaagttttcnnnnnnnnnnnnngttatatgtgccgacaatgtaaaatattttacattgtcggttgttaattacaac 694  Q
    |||||||||| || ||||||||||| ||||||               |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36772334 ttagtcgattctttgatcggataccgagtttt-----aaaaaaaaaattatatgtgccgacaatgtaaaatattttacattgtcggttgttaattacaac 36772240  T
Q  695 cgttaaatcaatataaatat 714  Q
    | ||||||||||| ||||||    
T  36772239 cattaaatcaataaaaatat 36772220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 748 - 1040
Target Start/End: Complemental strand, 36772223 - 36771919
Alignment:
Q  748 atatgattggttgtgatatgctgattgtgcaaaaagaatctaagtatttatattattca-------actctg-gtgaactgaaataaagtcactctttgt 839  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||       |||||  |||| ||||||||||||| ||||||||    
T  36772223 atatgattggttgtgatatggtgattgtgcaaaatgaatctaagtaattatattattcataggatcactctttgtgatctgaaataaagtcgctctttgt 36772124  T
Q  840 acttcaaacttataaagttattcaacaagaacaatttgttattccttgatttaaagacgtataaggactttatcttctgctacaaagttattgcatctgt 939  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  36772123 acttcaaacttataaagttattcaacaagaacaatttattattccttgatttgaagacgtataaggacttcatcttctgctacaaagttattgcatctgt 36772024  T
Q  940 ctcgttagc-atatgatcacaagtgaaataaaattccaccagcttgc-agaacttgtg-acagcaacaaaatatatgacagcaacat-acaaataaaatg 1035  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  36772023 ctcgttagcaatatgatcacaagtgaaataaaattccaccagcttgcaagaacttgtgaacagcaacaaaatatatgacagcaacataacaaataaaatg 36771924  T
Q  1036 tagaa 1040  Q
    |||||    
T  36771923 tagaa 36771919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 36770688 - 36770497
Alignment:
Q  8 aagggaatgttaattgggcaatagaatttgaaattagcatatagtttttcatgtggtgattttggttcatatgtgtctgttgttgggggatgaaggtttt 107  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||    
T  36770688 aaggggatgttaattgggcaatagaatttgagatcagcatatagtttttcatgtggtgattttggttcgtgtgtgtcagttgttgggg-atgaaggtttt 36770590  T
Q  108 gagg---ttggta---ttctttgtgtagttccaagatttgccataaaagcattgaaatggaaattggaaaatcaaagaatggatcaattgaaa 194  Q
    ||||   ||||||   |||||||||||||||||||||||||||| | |   ||||| || ||| || ||||||||||||||||||||||||||    
T  36770589 gaggaggttggtagtattctttgtgtagttccaagatttgccatgacacttttgaagtgaaaactgaaaaatcaaagaatggatcaattgaaa 36770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 22119911 - 22120090
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  22119911 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 22120010  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  22120011 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 22120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 40543088 - 40542909
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  40543088 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 40542989  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  40542988 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 7275300 - 7275478
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  7275300 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 7275399  T
Q  549 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||| ||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  7275400 tttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 2751294 - 2751473
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  2751294 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 2751393  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  | |||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  2751394 tttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 21835174 - 21835353
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| |||  ||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  21835174 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 21835273  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||| | |||||||    
T  21835274 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 7176040 - 7175861
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  7176040 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 7175941  T
Q  549 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||| ||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||  |||||||    
T  7175940 tttaaacaggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttttc 7175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 11997872 - 11998051
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||||||| |||||||||| ||||||| || |||||||||||||| ||||||||||||||| |          ||    
T  11997872 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagcttgctctggc 11997971  T
Q  549 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||| ||| |||||  |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  11997972 tttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 18044130 - 18044308
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| ||| |||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  18044130 ttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggc 18044229  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||| ||||   |||||||| ||| |||||||| ||| |||||||||||| |||||||||||||| ||||||    
T  18044230 tttaaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 479 - 627
Target Start/End: Complemental strand, 654863 - 654704
Alignment:
Q  479 tttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccggga 567  Q
    |||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||          |||||||| |||||  |    
T  654863 tttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaa 654764  T
Q  568 gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||| | |||||||||||| ||||||||||||| || |||||||||||||| |||||||    
T  654763 gtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 22703509 - 22703688
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||| |||||||||||||||||||||||||| |          ||    
T  22703509 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctggc 22703608  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  22703609 tttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 27312175 - 27312354
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  |||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||| || || ||||||||||||||          |    
T  27312175 ttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctacctctgac 27312274  T
Q  549 tttaaacgg-ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||| | |||||  |||||| | |||||||||||| ||| |||||||||||| |||||||||||||| |||||||    
T  27312275 tttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 23012686 - 23012595
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||| ||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23012686 ttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagctt 23012595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 28089839 - 28090021
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga------------ 546  Q
    |||||||  |||||||||||||||||||| |||||||||||||| ||| ||| || ||| |||||||||||||||||||||||||| |                
T  28089839 ttggcttgagatcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctc 28089938  T
Q  547 --gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
      |||||||| ||| |||||  |||||| |||| ||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  28089939 tggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 28090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 17197119 - 17196950
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| | | |||||| ||| ||||||| || ||||||||||||||| ||||||||||||||||          |||||||||||    
T  17197119 gatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgg 17197020  T
Q  558 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    || |||||  |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  17197019 ggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 21218011 - 21217832
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| ||  |||||||||||||||||||||||||||||||          ||    
T  21218011 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagcttgctctagc 21217912  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||  ||||   |||||| | |||||||| ||| ||||||||||| |||| |||||||||||||| |||||||    
T  21217911 tttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagttttc 21217832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 2103078 - 2103169
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  2103078 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 2103169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 10091211 - 10091302
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  10091211 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 10091302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 460 - 620
Target Start/End: Original strand, 17212076 - 17212248
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||  |||| | || ||||||||||||||||||||||||||||||||          ||    
T  17212076 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaagtccatacagagattgctctggc 17212175  T
Q  549 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacca 620  Q
    || ||||||| |||| |  |||| ||| |||||||||||| |||||||||||||||| ||||||| |||||||    
T  17212176 ttaaaacgggacccctgcaagtgagtggtgggattggtcccctcggattagtcgattcttggatcagatacca 17212248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 27009382 - 27009473
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||||||||||||||||| || ||| |||||||||| ||| ||| || ||||||||||||||||||||||||||||||||||||    
T  27009382 ttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaatttcggtgggctaagtccatacagagctt 27009473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 477 - 627
Target Start/End: Original strand, 29861711 - 29861872
Alignment:
Q  477 agtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg-ccccg 564  Q
    |||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||||||||||||| |||||    
T  29861711 agtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccg 29861809  T
Q  565 ggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
      |||||| | |||||||| ||| |||| ||||||||||| || ||||||||||| |||||||    
T  29861810 caagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 9683858 - 9683940
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||| |||||||||||||||||| ||||||||  | |||||| |||||||||||||||||||||||||||||||| ||||||    
T  9683858 gatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgggctaagtccataccgagctt 9683940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 42814896 - 42814978
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||||||||||| || |||||||||| ||||||| || ||| |||||||||||||||||||||||||| |||||    
T  42814896 gatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt 42814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 7800010 - 7799919
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||| ||||| |||||||||| |||||||    
T  7800010 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggttaagtccatagagagctt 7799919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 13332601 - 13332510
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||||||||||||||||||||  || |||||||||  ||||||| || | ||||||||||||||||||||||||||||||||||    
T  13332601 ttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctggagccaatttcggtgggctaagtccatacagagctt 13332510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 477 - 627
Target Start/End: Original strand, 16374034 - 16374196
Alignment:
Q  477 agtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacggggccccgg 565  Q
    |||||||||||| ||| ||||||| || ||||||| || ||||||||||||||||| ||||||||||||||          |||||||||||| |||| |    
T  16374034 agtttgctcctccagaggtctcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggctttaaacgggacccccg 16374133  T
Q  566 gag-tgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
     |  |||  | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  16374134 caaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 19421254 - 19421345
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||||||| |||||||||| || |||  || ||| |||||||| |||||||||||||||||||||||    
T  19421254 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagctt 19421345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 31197614 - 31197792
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacaga----------gct 549  Q
    |||||||  ||||||||||||||||| || ||||||||||||||||||||     ||| ||||||||||||  ||||||||||||||          |||    
T  31197614 ttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattcattatgtgtcaatttcggtggattaagtccatacagatcttgctcttgct 31197713  T
Q  550 ttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||||  |||||  | |||||||||||| ||| |||||||||||| |||||||||||| | |||||||    
T  31197714 ttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttttc 31197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 42913691 - 42913512
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||||||| |||||||||| |||| |   | |||||||||||| |||| ||||||||||| ||          ||    
T  42913691 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcatatggtgccaatttcgatgggataagtccatacggaacttgctctggc 42913592  T
Q  549 tttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||||| | | ||||  | |||||||||||| ||||||||||| |||| || ||||||||||| |||||||    
T  42913591 tttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 627
Target Start/End: Original strand, 31273946 - 31274115
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| |||  ||||| ||| ||||||| || | || |||||||| ||||||||||||||||||          |||||||||||    
T  31273946 gatcttggagtttgctcctccagagctctcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagcttgctctggctttaaacgg 31274045  T
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||| |||  ||||||   || ||||||||| |||| ||||||||||| ||||| |||||||| |||||||    
T  31274046 ggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttttc 31274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 32849623 - 32849705
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| ||| ||||| |||||||||||| |||||  |||||| ||||||||||||||| || ||||||    
T  32849623 gatcttggagtttgctcctccagaggtctcgggtttgattccctctagtctcaattttggtgggctaagtccacactgagctt 32849705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 39145821 - 39145652
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccat-acaga----------gctttaaacg 556  Q
    |||||||||||||||||||| ||||||||  |||| |||||||  | |||||||||||||||||||||||| || |||||          ||||||||||    
T  39145821 gatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctggctttaaacg 39145722  T
Q  557 gggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    || ||| |  |||||  | |||||||||||| |||| ||||||||||| ||| ||| |||||||||||||    
T  39145721 ggcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 470 - 550
Target Start/End: Complemental strand, 14199834 - 14199753
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||| |||||| ||| |||||||||| ||||||| ||| ||||||||| ||||||||||||| ||| |||||||    
T  14199834 atcttggagtttcctcctccagaggtctcaggttcgattccctctaatgccaattttggtgggctaagtctatatagagctt 14199753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 2344322 - 2344501
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt------- 551  Q
    |||||||  |||||||||||||||||||| | |  |||||| || ||||||  || |||||||||| ||||||||||||||||||||||||||           
T  2344322 ttggcttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaattttggtgggctaagtccatacagagctttttttggc 2344421  T
Q  552 ---aaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
       ||||||| |||| | | ||| | | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  2344422 tttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 2344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 547 - 626
Target Start/End: Original strand, 3851878 - 3851958
Alignment:
Q  547 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||||||||| | | ||||| | |||||||| ||| |||||||||||||||| |||||||||||||| ||||||    
T  3851878 gctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 515 - 627
Target Start/End: Original strand, 23092175 - 23092298
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgat 603  Q
    ||||||||||||||||||||||||||||||||          ||||||||||||| |||||  | |||  | |||||||||||| |||||||||||||||    
T  23092175 gtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcgat 23092274  T
Q  604 ttttggatcggataccaagttttc 627  Q
    |  ||||||||||||| |||||||    
T  23092275 tcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 27704025 - 27704116
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||||||| |||||||||||  ||| |||||||||| |||| || | | ||||||||||||||||||||||||||| |||||||    
T  27704025 ttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatttcctttggtgccaatttcggtgggctaagtccatagagagctt 27704116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 567 - 626
Target Start/End: Complemental strand, 31712961 - 31712902
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  31712961 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 460 - 533
Target Start/End: Original strand, 22299872 - 22299946
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggct 533  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||| ||||||| || |||||||||||||||||||    
T  22299872 ttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggct 22299946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 494 - 626
Target Start/End: Complemental strand, 41907657 - 41907514
Alignment:
Q  494 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacggggccccggga-gtgggtgatgggat 581  Q
    |||||||||| ||||| | || ||||||||||| |||||||||||||||||||||          ||||||||| |||||| | | ||||||| ||||||    
T  41907657 gtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtgggat 41907558  T
Q  582 tggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | | |||||||||||| |||||||||||||| ||||||    
T  41907557 tggtcccc-cagattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 22696352 - 22696433
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    ||||||||||| |||||||||  | |||||||||||||||||| || |||||||||||||||||   | |||||||||||||||    
T  22696352 gatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg--gactccatacagagcttt 22696433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 619
Target Start/End: Complemental strand, 43785477 - 43785306
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  |||||| ||| ||||||||| | | |||||| ||| ||||||| || |||| |||||| |||| |||||||||||||||||||            
T  43785477 ttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattcccacttgtgctaatttcagtggactaagtccatacagagcttactctggt 43785378  T
Q  551 --taaacggggcc-ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
      ||||||||||| |||  |||||  | || ||||||||| || ||||||||||||||||||||||||||||    
T  43785377 tttaaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggatacc 43785306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 473 - 550
Target Start/End: Complemental strand, 9718152 - 9718074
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||| | | |||||| ||| ||||||| || ||| |||||||| ||||||||||||||| |||||||    
T  9718152 ttggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagctt 9718074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 627
Target Start/End: Original strand, 22299958 - 22300004
Alignment:
Q  581 ttggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||    
T  22299958 ttggtcctctcggattagtcgattcttgaatcggataccgagttttc 22300004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 477 - 550
Target Start/End: Original strand, 28950911 - 28950985
Alignment:
Q  477 agtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||  ||| |||||||||| || |||| || ||||||||||||||||||||||| |||| |||||||    
T  28950911 agtttgctccttcagaggtctcaggttcgactccctctggtgccaatttcggtgggctaagttcatatagagctt 28950985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 577 - 626
Target Start/End: Original strand, 22696473 - 22696522
Alignment:
Q  577 gggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||||||||||||||||| |  |||||||||||||| ||||||    
T  22696473 gggattggtcctctcggattagtcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 576 - 625
Target Start/End: Original strand, 32849742 - 32849791
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    |||||||||||| ||| |||||||||||| |||||||||||||| |||||    
T  32849742 tgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 514 - 550
Target Start/End: Original strand, 21373788 - 21373824
Alignment:
Q  514 agtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||||||||||||||| |||||||||||    
T  21373788 agtgccaatttcggtgggctaagtctatacagagctt 21373824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 625
Target Start/End: Original strand, 22638409 - 22638488
Alignment:
Q  547 gctttaaacggggcc-ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    ||||||||||||||| |||  |||||| | |||||||| ||  |||| ||||||||||| |||||||||||||| |||||    
T  22638409 gctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 615
Target Start/End: Original strand, 25333554 - 25333593
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcgga 615  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  25333554 tgggattggtcccctcggattagtcgattcttggatcgga 25333593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 28647001 - 28647079
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    ||||||||||| |||| ||||  | |||||||||| ||||||| || |||||||||||||||||| ||||| ||||||||    
T  28647001 gatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggc-aagtcaatacagag 28647079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 619
Target Start/End: Original strand, 36395501 - 36395540
Alignment:
Q  580 attggtcctctcggattagtcgatttttggatcggatacc 619  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  36395501 attggtcctctcggattagtcgattcttggattggatacc 36395540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 460 - 548
Target Start/End: Complemental strand, 12211713 - 12211625
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagc 548  Q
    |||||||  ||||||||||| |||||||||  |  |||||||||||| |||| || |||||||||||| ||| | |||||||||||||||    
T  12211713 ttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttcgatggac-aagtccatacagagc 12211625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 473 - 551
Target Start/End: Complemental strand, 21574268 - 21574189
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattccccta--gtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    ||||||| |||||||||  | ||| |||||| |||||||||   ||||||| |||||||||| ||||||||||||||||||    
T  21574268 ttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggc-aagtccatacagagcttt 21574189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 460 - 509
Target Start/End: Original strand, 23854419 - 23854468
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattc 509  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||||    
T  23854419 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 651 - 680
Target Start/End: Original strand, 36772254 - 36772283
Alignment:
Q  651 ccgacaatgtaaaatattttacattgtcgg 680  Q
    ||||||||||||||||||||||||||||||    
T  36772254 ccgacaatgtaaaatattttacattgtcgg 36772283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 1e-44; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 469 - 627
Target Start/End: Original strand, 14212920 - 14213080
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacgggg-ccccggg 566  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| | ||||||||||||||| |||||||||||||||| |||||      
T  14212920 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtccatatagagctttaaacgggggccccgca 14213019  T
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  14213020 agtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttc 14213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 3222812 - 3222635
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  ||||||| |||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||            
T  3222812 ttggcttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtc 3222714  T
Q  551 --taaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
      ||||||||||||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  3222713 tttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 654315 - 654146
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          |||||||||||    
T  654315 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 654216  T
Q  558 ggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||| ||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  654215 ggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 15360276 - 15360097
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  15360276 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 15360177  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  | |||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  15360176 tttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 15360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 34147365 - 34147544
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  ||||||||||||||||| || ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  34147365 ttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 34147464  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  34147465 tttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 34159981 - 34160160
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  ||||||||||||||||| || ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  34159981 ttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 34160080  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  34160081 tttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 11448890 - 11449068
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          ||    
T  11448890 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 11448989  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||| | ||||||    
T  11448990 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 21148688 - 21148510
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  ||||||||||||||||  |  ||| |||||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||||            
T  21148688 ttggcttgggatcttggagtttgctttttcagaggtctcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagagcttgctctgac 21148589  T
Q  551 --taaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
      ||||||||||||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  21148588 tttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 460 - 625
Target Start/End: Original strand, 9238994 - 9239171
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||| |||||||||| |||          ||    
T  9238994 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctttggc 9239093  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    |||||| |||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  9239094 tttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 17081232 - 17081141
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| |||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  17081232 ttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagctt 17081141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 469 - 626
Target Start/End: Original strand, 28672095 - 28672264
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||||||| |||| ||||| ||||||| || ||| |||||| |||||||||||||||||||||          |||||||||||    
T  28672095 gatcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgg 28672194  T
Q  558 ggccc-cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    | ||| ||  |||||| | |||||||||||| |||||||||||||||| ||||||| |||||| ||||||    
T  28672195 gcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 21982498 - 21982320
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  ||||||| |||||||||||| ||| |||| ||||| |||||||  | ||||||||||| ||||||||||||||||||||          ||    
T  21982498 ttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctctggc 21982399  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  21982398 tttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagttttc 21982320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 5360249 - 5360158
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||| ||| ||| |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  5360249 ttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacagagctt 5360158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 469 - 627
Target Start/End: Original strand, 1344963 - 1345133
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||| ||||| ||| |||||||||| ||||||| || ||||||||||| |||||||||||||||||| |          |||||||||||    
T  1344963 gatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaacgg 1345062  T
Q  558 g-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |  |||||  |||||  | |||||||||||| || ||||||||||||| |||||||||||||| |||||||    
T  1345063 gccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 1345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 12591656 - 12591747
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||    
T  12591656 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggctaagtccatacagagctt 12591747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 473 - 626
Target Start/End: Complemental strand, 9690803 - 9690638
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggcc 561  Q
    ||||||||||||| || ||| |||| ||||| |||| |  |||||| ||||||||||||||||||||||||||||||||          |||||||||||    
T  9690803 ttggagtttgctcttccagaggtcttaggttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcc 9690704  T
Q  562 c-cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    | |   |||||  | ||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9690703 ctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 9843957 - 9844136
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||||||| |||||||||| || |||| || ||| |||||| |||||| ||||||||||||||          ||    
T  9843957 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgacttcctctggtgtcaattttggtgggttaagtccatacagagcttgttctggc 9844056  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| ||||   |||||| | || |||||||||  ||||||||||||||| |||||||||||| | |||||||    
T  9844057 tttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttc 9844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 13753259 - 13753346
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattc-ccctagtgccaatttcggtgggctaagtccatacaga 546  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||  |||| | || ||||||||||||||||||||| ||||||||||    
T  13753259 ttggctttggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaaatccatacaga 13753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 481 - 550
Target Start/End: Original strand, 12390465 - 12390535
Alignment:
Q  481 tgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  12390465 tgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 12390535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 469 - 548
Target Start/End: Original strand, 9208280 - 9208359
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggctaagtccatacagagc 548  Q
    |||||||||||||||||||||  | |||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||    
T  9208280 gatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggc-aagtccatacagagc 9208359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 479 - 626
Target Start/End: Original strand, 11840939 - 11841097
Alignment:
Q  479 tttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc----------tttaaacggggccccggga 567  Q
    |||||||||| ||| |||||||| | ||||||| || ||||||||||||||||| |||||||||||| |||          |||||||||||||||   |    
T  11840939 tttgctcctccagaggtctcaggctcgattccctctggtgccaatttcggtgggttaagtccatacaaagcttgctttggttttaaacggggccccataa 11841038  T
Q  568 gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||  | ||||||| |||| |||| ||||||||||| |||||||||||||| ||||||    
T  11841039 gtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 28968220 - 28968133
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattc-ccctagtgccaatttcggtgggctaagtccatacaga 546  Q
    |||||||  |||||||||||||||||||||||| ||||||| || ||||| | |||| | ||||||||||||| ||||||||||||||    
T  28968220 ttggcttgggatcttggagtttgctcctctagaggtctcagattcgattctctctagcgtcaatttcggtgggttaagtccatacaga 28968133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 11007184 - 11007363
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||| | ||  |  |||||||||||||||||||||||||| |||||            
T  11007184 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctctcaatttcggtgggctaagtccatacaaagcttgctctagc 11007283  T
Q  551 --taaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
      ||| ||||||||| | | ||||| | ||||||||| || |||||||||||||||| || ||||||||||| |||||||    
T  11007284 tttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagttttc 11007363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 33718627 - 33718469
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacggggccccggga 567  Q
    ||||||||||||| || ||| |||  ||||||||| ||||| | || |||| ||||| ||||  |||||| ||||||||| ||||||||||||| | | |    
T  33718627 gatcttggagtttacttctccagagatctcaggttcgattctctctggtgcaaattttggtgaactaagtacatacagag-tttaaacggggcctctgca 33718529  T
Q  568 -gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
     ||||  | |||||||| ||| |||||||||||||||| |||||||||||| ||| ||||    
T  33718528 agtggacggtgggattgatcccctcggattagtcgattcttggatcggatatcaaatttt 33718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 31039039 - 31039127
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    ||||||||  ||||||||||||||||| | | |  ||||| ||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  31039039 ttggctttgaatcttggagtttgctccaccaaagatctcaagtttgattccctctagtatcaatttcgatgggctaagtccatacagag 31039127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 469 - 548
Target Start/End: Complemental strand, 17149625 - 17149546
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc 548  Q
    ||||||||||| |||||||||  | |||||||||| ||||||| || |||| ||||||||| ||| |||||||||||||||    
T  17149625 gatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggc-aagtccatacagagc 17149546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 576 - 616
Target Start/End: Original strand, 20836970 - 20837010
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggat 616  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  20836970 tgggattggtcttctcagattagtcgatttttggatcggat 20837010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 576 - 626
Target Start/End: Complemental strand, 5360121 - 5360071
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| |||| ||||||||||| || ||||||||||| ||||||    
T  5360121 tgggattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 460 - 544
Target Start/End: Original strand, 33499493 - 33499578
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtt-tgattccc-ctagtgccaatttcggtgggctaagtccataca 544  Q
    |||||||  |||||||||||||||||||||  | ||||||||||  ||||||| || ||| ||||||||||||||| ||||||||||    
T  33499493 ttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaatttcggtgggct-agtccataca 33499578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 9e-39; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 19456387 - 19456210
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacaga----------gct 549  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||| || || ||||||||||||||||||||||||||||||||          |||    
T  19456387 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggct 19456288  T
Q  550 ttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  19456287 ttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 19456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 8484839 - 8484660
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||||          ||    
T  8484839 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctggc 8484740  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  8484739 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 11926671 - 11926501
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          |||||||||||    
T  11926671 gatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 11926572  T
Q  558 gg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||  |||||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  11926571 ggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 470 - 627
Target Start/End: Complemental strand, 27498899 - 27498730
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacggg 558  Q
    ||||||||||||||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||||||||| |          ||||||||||||    
T  27498899 atcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggg 27498800  T
Q  559 g-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    | |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  27498799 gcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 469 - 619
Target Start/End: Original strand, 38684236 - 38684397
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          |||||||||||    
T  38684236 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 38684335  T
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    | |||||  |||| | | |||||||||||| |||||||||||||||| ||||||||||||||    
T  38684336 gcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggatacc 38684397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 469 - 627
Target Start/End: Original strand, 18207235 - 18207405
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacg- 556  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| |  ||||||||||||||||||||||||||||||||          ||||||||||     
T  18207235 gatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggctttaaacga 18207334  T
Q  557 gggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    || |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  18207335 ggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 470 - 619
Target Start/End: Complemental strand, 11465075 - 11464915
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggg 558  Q
    ||||||||||||||||||| | |||||||||||| |||| || || |||||||||| |||||||||||| ||||||||||||          ||||||||    
T  11465075 atcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacggg 11464976  T
Q  559 gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    ||||||  |||||||| |||||||||||| |||| ||||||||||| ||||||||||||||    
T  11464975 gccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggatacc 11464915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 7085804 - 7085625
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  ||||||||||||| |||||| ||| ||||| |||| ||||||| |||||| |||||||||||||||||||||||||||||          |    
T  7085804 ttggcttgggatcttggagttttctcctccagaggtctccggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgac 7085705  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  7085704 tttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 15641283 - 15641105
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||          ||    
T  15641283 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggc 15641184  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  15641183 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 619
Target Start/End: Complemental strand, 33709679 - 33709510
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga--------gctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||| ||||||| || ||||||||||||||||||||||||||||||||        ||||    
T  33709679 ttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagagagctctggctt 33709580  T
Q  551 taaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    ||||||||  ||||   |||||| | |||||||||||| |||||||||||||||| ||||||||||||||    
T  33709579 taaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 33709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 38631139 - 38630978
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacggg 558  Q
    |||||||  |||||||||||||||||||| ||| ||||||| || ||||||| || |||||||||||| ||||||||||||||||||||       | ||    
T  38631139 ttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcgatgggctaagtccatacagag-------cagg 38631047  T
Q  559 gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
     |||||  |||||| | |||||||||||| ||||||||| |||||| |||||||||||||| |||||||    
T  38631046 cccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 32059618 - 32059439
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||  || ||||||||||||||||||||||||||||||||          ||    
T  32059618 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 32059519  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  32059518 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 32059439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 22392720 - 22392886
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacagagctttaaacgggg 559  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||||||    |||||||||||||||||||||||        |||||||||||||    
T  22392720 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc--tgccaatttcggtgggctaagtcttgctctggctttaaacgggg 22392817  T
Q  560 ccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||| | | ||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| |||||||    
T  22392818 cccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttc 22392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 25586951 - 25587042
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| || || ||||||||||||||||||||||||||||||||||||    
T  25586951 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggctaagtccatacagagctt 25587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 512 - 619
Target Start/End: Original strand, 35425085 - 35425203
Alignment:
Q  512 ctagtgccaatttcggtgggctaagtccatacagagct----------ttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtc 600  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||| | | ||||| | |||||||||||||||||||||||||    
T  35425085 ctagtgccaatttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtc 35425184  T
Q  601 gatttttggatcggatacc 619  Q
    |||| ||||||||||||||    
T  35425185 gattcttggatcggatacc 35425203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 37495066 - 37495157
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||    
T  37495066 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagctt 37495157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 470 - 550
Target Start/End: Original strand, 34310171 - 34310252
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||    
T  34310171 atcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagctt 34310252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 469 - 618
Target Start/End: Complemental strand, 13038623 - 13038463
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga---------gctttaaacggg 558  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| | |||||||||| ||||||||         ||||||||||||    
T  13038623 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtatggctttaaacggg 13038524  T
Q  559 g-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    | |||||  |||||| | |||||||| ||| |||| ||||||||||| |||||||||||||    
T  13038523 gcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 30485847 - 30486026
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||| | || ||| ||||||||||||||||||||||||||||          ||    
T  30485847 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggc 30485946  T
Q  549 tttaaacg-gggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||  | |||||  |||||| | |||||||||||| |||||||||||| ||| |||||||||||||| |||||||    
T  30485947 tttaaacgatgcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 469 - 627
Target Start/End: Complemental strand, 10869734 - 10869564
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacgg 557  Q
    |||||||||||||||||||| | | |||||||||| ||||||  || || ||||||||||||||||||||||| || ||||||          |||| ||    
T  10869734 gatcttggagtttgctcctccaaaggtctcaggttcgattccatctggttccaatttcggtgggctaagtccacactgagcttgctctggctttaaatgg 10869635  T
Q  558 ggcc-ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||| |||  |||||| | |||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  10869634 ggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 460 - 618
Target Start/End: Complemental strand, 13108627 - 13108458
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag---------ct 549  Q
    |||||||  |||||||||||||||||||| |||  ||||||||| ||||||| || |||||||||| | |||||||||| |||||||||         ||    
T  13108627 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtctgcct 13108528  T
Q  550 ttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    |||||||||| |||||  |||||| | |||||||| ||| |||| ||||||||||| |||||||||||||    
T  13108527 ttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 547 - 627
Target Start/End: Complemental strand, 41351183 - 41351103
Alignment:
Q  547 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||||| |||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  41351183 gctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 1827708 - 1827617
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| ||  | |||||||||||||| ||||||||||||||||||    
T  1827708 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctgataccaatttcggtgggttaagtccatacagagctt 1827617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 4603796 - 4603975
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| | |  ||||| ||| ||||||  || |||||||||||| |||||||||||||||||||          ||    
T  4603796 ttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagtccatacagagctcgctctggc 4603895  T
Q  549 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||||| |  |||||  | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  4603896 tttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 4603975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 473 - 618
Target Start/End: Complemental strand, 27487720 - 27487562
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacag----------agctttaaacggggcc 561  Q
    ||||||||||||| || ||| |||||||||||||| ||   | |||||||||||||||| ||||||||||||||          |||||||||||||| |    
T  27487720 ttggagtttgctcttccagaggtctcaggtttgatcccatttggtgccaatttcggtggactaagtccatacagagcttgctctagctttaaacgggggc 27487621  T
Q  562 cc--gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    ||  |  |||||| | |||||||||||| |||||||||||||||| |||||||||||||    
T  27487620 ccttgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatac 27487562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 15971300 - 15971209
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| || |||| ||  || |||||||||||||||||||||||||| |||||    
T  15971300 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctgatgtcaatttcggtgggctaagtccatacatagctt 15971209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 36954846 - 36954925
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||||||||||||||||||| |||||||||| ||||||| || || | |||||||| | |||||||||||||||||    
T  36954846 gatcttggagtttgctcctctagaggtctcaggttcgattccctctggttctaatttcggcgtgctaagtccatacagag 36954925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 549 - 626
Target Start/End: Original strand, 22693054 - 22693132
Alignment:
Q  549 tttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||||||| | | ||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 460 - 548
Target Start/End: Original strand, 7151348 - 7151437
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc 548  Q
    |||||||  |||||||||||||||||||| ||| |||| ||||| || |||| || | | ||||||||||||||||||||||||||||||    
T  7151348 ttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccctctggcgtcaatttcggtgggctaagtccatacagagc 7151437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 459 - 550
Target Start/End: Complemental strand, 6014459 - 6014367
Alignment:
Q  459 attggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||  |||||||||||||||| ||| |||  ||||||||| |||| |  || ||||||||||||||||| ||||||||||||||||||    
T  6014459 attggcttgggatcttggagtttgcttctccagagatctcaggttcgattacttctggtgccaatttcggtgggttaagtccatacagagctt 6014367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 31288124 - 31287945
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  |||||||||||||||||||| | | |||||| ||| ||||||| | | |||||||||||||||| |||||||||||| ||          |    
T  31288124 ttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttgac 31288025  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||  |||| |||||||| || ||||| |||||||| |||||||    
T  31288024 tttaaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagttttc 31287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 567 - 627
Target Start/End: Original strand, 37495192 - 37495252
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  37495192 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 576 - 627
Target Start/End: Complemental strand, 10631339 - 10631288
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  10631339 tgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 12398626 - 12398535
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| | | |||||||||| |||||||  | ||| |||||||||||| |||||| ||||||||||||    
T  12398626 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagctt 12398535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 19145580 - 19145498
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    ||||||||||| |||||||||  | ||||| |||| ||||||| || |||||||||||||||||| ||||||||||||||||||    
T  19145580 gatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggc-aagtccatacagagcttt 19145498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 626
Target Start/End: Original strand, 42193513 - 42193680
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||| | | ||| |||||||||| |||| || ||  ||||||||||||||||||||||| |||||||          ||||||||  |    
T  42193513 gatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacagagtttgctttggctttaaa-tg 42193611  T
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    | |||||  |||||| | |||| |||||||||||||||||||||||| ||||||| |||| ||| ||||    
T  42193612 gaccccgcaagtgggcggtggggttggtcctctcggattagtcgattcttggatcagatatcaattttt 42193680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 548
Target Start/End: Original strand, 15931087 - 15931166
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc 548  Q
    |||||||||||||||| ||  | | |||||||||| ||||||| || |||||||||||||| |||||||||||||||||||    
T  15931087 gatcttggagtttgcttcttcacaagtctcaggttcgattccctctggtgccaatttcggt-ggctaagtccatacagagc 15931166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 469 - 627
Target Start/End: Complemental strand, 21236531 - 21236361
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 557  Q
    ||||||||||||| |||||  ||| ||||  |||| ||||| | |||||| |||||||  ||||||||||||||||||||          ||||||||||    
T  21236531 gatcttggagttttctccttcagaggtcttcggttcgattctctctagtgtcaatttcaatgggctaagtccatacagagttttctctgactttaaacgg 21236432  T
Q  558 ggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| | | ||||| | ||||||| |||| ||| |||||||||||| ||| |||||||||| |||||||    
T  21236431 ggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttttc 21236361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 626
Target Start/End: Complemental strand, 23270700 - 23270522
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  ||||||||||||||||| || | | |||||| ||| |||| ||   | |||||||||||||||||||||||||||||||||||            
T  23270700 ttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtgggctaagtccatacagagcttgctttggc 23270601  T
Q  551 --taaacggggccccgggag-tgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
      ||||||| ||||| | |  |||  | |||||||||||| ||||||||||| |||| |||||| ||||||||||||||    
T  23270600 tttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 576 - 626
Target Start/End: Complemental strand, 28614536 - 28614486
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||| ||| |||| |||||||||||||||||||||||||| ||||||    
T  28614536 tgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 472 - 544
Target Start/End: Complemental strand, 15485457 - 15485385
Alignment:
Q  472 cttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccataca 544  Q
    |||||||| |||||||||  | |||||||||| |||||||||    |||||||||||||| ||||||||||||    
T  15485457 cttggagtgtgctcctctcaaggtctcaggttcgattcccctgacaccaatttcggtgggttaagtccataca 15485385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 460 - 512
Target Start/End: Original strand, 37397732 - 37397784
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc 512  Q
    ||||||| ||||||||||||||||||||| | | |||| ||||||||||||||    
T  37397732 ttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattcccc 37397784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 626
Target Start/End: Original strand, 5049254 - 5049333
Alignment:
Q  547 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| |||||  | |||  | ||||||||||||  ||| ||||||||||| |||||||| ||||||||||||    
T  5049254 gctttaaacgggcccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 540
Target Start/End: Complemental strand, 12317318 - 12317247
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtcca 540  Q
    |||||||||||||||||||| || ||||| ||||||| |||  || ||| ||||||||||||| ||||||||    
T  12317318 atcttggagtttgctcctcttgaggtctcgggtttgatttcatctggtgtcaatttcggtgggttaagtcca 12317247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 626
Target Start/End: Complemental strand, 19145471 - 19145412
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||||||| ||||||||||| | || |||||||||||||| ||||||    
T  19145471 agtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 627
Target Start/End: Complemental strand, 25548584 - 25548533
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||    
T  25548584 tgggattggtcatctcgaattagtcgattcttggatcgaataccgagttttc 25548533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 460 - 549
Target Start/End: Complemental strand, 22253323 - 22253233
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagct 549  Q
    |||||||  |||||| || |||||||||||  |  ||||||||| || || | ||||||||||||||| ||||||||||||||||| ||||    
T  22253323 ttggcttgggatctttgactttgctcctctctagatctcaggttcgactttctctagtgccaatttcgatgggctaagtccatacaaagct 22253233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 460 - 510
Target Start/End: Original strand, 34049841 - 34049891
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcc 510  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||    
T  34049841 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 576 - 626
Target Start/End: Original strand, 34310289 - 34310339
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| |||| |||| |||||| |||||||||||||| ||||||    
T  34310289 tgggattggtcccctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 615
Target Start/End: Original strand, 5067390 - 5067447
Alignment:
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcgga 615  Q
    |||||||  |||||| | |||||||||||| ||| |||||||||||| ||||||||||    
T  5067390 ggccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 5e-37; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 15566677 - 15566499
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||          ||    
T  15566677 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 15566578  T
Q  549 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||||  |||||| | |||||||||||| ||| |||||||||||| |||||||||||||| |||||||    
T  15566577 tttaaacgggcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 52821804 - 52821636
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||| ||||||||||||||||          |||||||||||    
T  52821804 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgg 52821705  T
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  52821704 ggccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 10190920 - 10190741
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||          ||    
T  10190920 ttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 10190821  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||  | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  10190820 tttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 10083997 - 10083818
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||          ||    
T  10083997 ttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 10083898  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| ||||   |||||  | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  10083897 tttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 25289892 - 25289714
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||          ||    
T  25289892 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 25289793  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  25289792 tttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcgaattagtcgattcttggatcggataccgagttttc 25289714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 460 - 626
Target Start/End: Complemental strand, 49258440 - 49258262
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  ||||||| |||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||          ||    
T  49258440 ttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggc 49258341  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||| ||||   |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  49258340 tttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 53424354 - 53424176
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| | | |||||||||||||||||||||||||||||||          ||    
T  53424354 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagtttgctatggc 53424255  T
Q  549 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||||  |||| | | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  53424254 tttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 35492930 - 35493108
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  35492930 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 35493029  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||| | ||||| ||||||    
T  35493030 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 30807331 - 30807152
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  30807331 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 30807232  T
Q  549 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||  |||||  |||||| | | |||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  30807231 tttaaacggggccccccgcaagtgggcggtaggattggtcc-ctcggattagtcgattcttggatcggataccgagttttc 30807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 39042021 - 39041852
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacgg 557  Q
    |||||||||||||||||||| ||| |||||| ||| ||||| | || ||||||||||||||||||||||||||| ||||||||          |||||||    
T  39042021 gatcttggagtttgctcctccagaggtctcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaaacgg 39041922  T
Q  558 ggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | | ||||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  39041921 ggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 8456328 - 8456149
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||| ||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  8456328 ttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 8456229  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  ||||||   |||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  8456228 tttaaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 45272594 - 45272415
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||||||||||| || ||||||| || ||||||||||||||||||||||||||||| ||          ||    
T  45272594 ttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggc 45272495  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| ||||||||||| || | |||||||||||||| |||||||    
T  45272494 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 46576367 - 46576546
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||| ||||||||||||||||||||          ||    
T  46576367 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggc 46576466  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | | |||||||||| || ||||||||||||| |||||||||||||| |||||||    
T  46576467 tttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 53234088 - 53233910
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||            
T  53234088 ttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 53233989  T
Q  551 --taaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
      ||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  53233988 tctaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 460 - 618
Target Start/End: Original strand, 25379780 - 25379950
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||  |||||||||||||||| ||||||||||||||||||          ||    
T  25379780 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagtccatacagagcttgctctggc 25379879  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    ||||||||||| |||||  || ||| | |||||||||||| |||||||||||||||| |||||||||||||    
T  25379880 tttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatac 25379950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 26174132 - 26174311
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| || || ||||||||||||||||| ||||||||||||||          ||    
T  26174132 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctctggc 26174231  T
Q  549 tttaaa-cggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||  ||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  26174232 tttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 40133627 - 40133448
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  ||| |||||||||||||||| | | |||||||||| ||||||| || ||| ||||||||||||||||||||||||||||          ||    
T  40133627 ttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctggc 40133528  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  40133527 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 26108311 - 26108402
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  26108311 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 26108402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 45529932 - 45529754
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | |||||||||| |||||||||||||||||||          ||    
T  45529932 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgatgggctaagtccatacagagcttgctctggc 45529833  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  45529832 tttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 45529754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 40940844 - 40940935
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||||||||| |||||||||||||||||||    
T  40940844 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagctt 40940935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 469 - 627
Target Start/End: Original strand, 48977416 - 48977586
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| | | |||||||||| ||||||  || ||||||||||||||||| ||||||||||||||          |||||||||||    
T  48977416 gatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacgg 48977515  T
Q  558 ggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |  |||||| | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  48977516 ggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 469 - 618
Target Start/End: Complemental strand, 18177056 - 18176895
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    ||||||||||||||||| || ||| || ||||||| ||||||| || |||||||||||||||| |||||||||||||||          |||||||||||    
T  18177056 gatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacgg 18176957  T
Q  558 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    || |||||  |||||| | ||||||||||||  ||||||||||||||| |||||||||||||    
T  18176956 ggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatac 18176895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 469 - 626
Target Start/End: Original strand, 21362971 - 21363140
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||| |||||||||| |||||||||||||||||          |||||||||||    
T  21362971 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggctttaaacgg 21363070  T
Q  558 -ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
     | |||||  |||||| | |||||||||| | ||||||||| |||||| |||||||||||||| ||||||    
T  21363071 agcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 481 - 627
Target Start/End: Complemental strand, 8097436 - 8097278
Alignment:
Q  481 tgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc----------tttaaacggggccccggga-g 568  Q
    |||||||| ||| | |||||||| ||||||| || |||| ||||||| |||||||||||||||||||||          ||||||||||||||| | | |    
T  8097436 tgctcctccagaggcctcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggctttaaacggggcccccgcaag 8097337  T
Q  569 tgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  8097336 tgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 31538016 - 31537925
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||||||||||| || |||||||||| ||||||||||||| |||||||||||    
T  31538016 ttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaattttggtgggctaagtctatacagagctt 31537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 469 - 627
Target Start/End: Complemental strand, 52455818 - 52455648
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||| | ||||||||||| | ||||||          ||||||||||    
T  52455818 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtctacacagagcttgctctgactttaaacgg 52455719  T
Q  558 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    || |||||  ||||  || |||||||||||| |||||||||||||||| |||||| ||||||| |||||||    
T  52455718 ggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 52455648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 7470384 - 7470302
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| | | |||||||||| ||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  7470384 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgggctaagttcatacagagctt 7470302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 547 - 627
Target Start/End: Complemental strand, 24165794 - 24165714
Alignment:
Q  547 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||||||||  |||||| | |||||||| ||| |||||||||||||||| |||||||||||||| |||||||    
T  24165794 gctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 460 - 619
Target Start/End: Original strand, 30257643 - 30257814
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| | | |||||||||| |||||||  | |||||||||||| ||| |||||||||||||||          ||    
T  30257643 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagcttgctctggc 30257742  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    |||||| |||| |||||  |||||| | ||| |||||||| |||||||||||||||| ||||||||||||||    
T  30257743 tttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggatacc 30257814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 34492753 - 34492662
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||| ||||||| ||  ||||||||||| |||||||||||||||||||||||    
T  34492753 ttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcgttgggctaagtccatacagagctt 34492662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 7485694 - 7485531
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccata--caga----gctttaaacggggcc 561  Q
    |||||||||||||||||||| | | |||||||||| ||||||| ||  |||||||||||||||||||||| ||||    ||    ||||||||| || ||    
T  7485694 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggctaagttcatagcttgatctggctttaaacaggccc 7485595  T
Q  562 ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    | |  |||||  | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  7485594 ctgcaagtggccggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 29915438 - 29915356
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| ||| |||||||||| |||| |  || |||||| |||||||||||||||| ||||||||||||    
T  29915438 gatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggctaagtacatacagagctt 29915356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 29964591 - 29964509
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| ||| |||||||||| |||| |  || |||||| |||||||||||||||| ||||||||||||    
T  29964591 gatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggctaagtacatacagagctt 29964509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 626
Target Start/End: Original strand, 32151452 - 32151621
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacgg 557  Q
    |||||||||||||||||||| | | || |||  || ||||| | |||||||||||||||||||||||||  ||||||||||||          |||||||    
T  32151452 gatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgggctaagctcatacagagcttgctctggctttaaacgg 32151551  T
Q  558 ggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | | ||||| | || ||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  32151552 ggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 469 - 537
Target Start/End: Original strand, 19857079 - 19857148
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagt 537  Q
    |||||||||||||||||||| |||||||||||||| |||||||  | ||| |||||||||||||||||||    
T  19857079 gatcttggagtttgctcctccagatgtctcaggttcgattccctttggtgtcaatttcggtgggctaagt 19857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 567 - 627
Target Start/End: Complemental strand, 53848493 - 53848433
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  53848493 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 567 - 626
Target Start/End: Original strand, 24407399 - 24407458
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  24407399 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 469 - 627
Target Start/End: Complemental strand, 25344226 - 25344057
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 557  Q
    |||||| ||||||||||||| |||  ||||||||||||||||| | | || ||||||  |||| ||||||||||||||||          ||||||||||    
T  25344226 gatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaatttttgtggtctaagtccatacagagtttgctctggctttaaacgg 25344127  T
Q  558 ggccccggg-agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |  |||||| |||||||||||| | |||||||||||||||| || ||||| ||||| |||||||    
T  25344126 ggcccccgctagtgggcgatgggattggttc-ctcggattagtcgattcttagatcgaataccgagttttc 25344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 469 - 619
Target Start/End: Complemental strand, 33398637 - 33398475
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacgg 557  Q
    ||||||| ||||||||| |||| |  ||||| ||| ||||||| ||||||||||||| |||||| || |||||||||||||||          |||||||    
T  33398637 gatcttgtagtttgctcttctaaagatctcaagttcgattccctctagtgccaattttggtgggttatgtccatacagagcttgctctagctttaaacgg 33398538  T
Q  558 ggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    |||||| | | ||||| | |||||||||| | |||| ||||||||||| ||||||||||||||    
T  33398537 ggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggatacc 33398475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 494 - 627
Target Start/End: Complemental strand, 2511441 - 2511296
Alignment:
Q  494 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacggggcc-ccgggagtgggtgatgggat 581  Q
    |||||||||| ||||||| || ||||||||||||||||||||||| |||||||||          ||||||||||| || |||  |||||| | ||||||    
T  2511441 gtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggcggtgggat 2511342  T
Q  582 tggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||  |||| |||||| |||| ||| ||||||||||||||||||    
T  2511341 tggtctcctcgaattagtagattcttgaatcggataccaagttttc 2511296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 473 - 550
Target Start/End: Original strand, 51532821 - 51532899
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||| ||| | | |||||| ||| ||||| | ||| |||||||||||||||||||||||||||||||||||    
T  51532821 ttggagtttgcttctccaaaggtctcatgttcgattctctctaatgccaatttcggtgggctaagtccatacagagctt 51532899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 470 - 546
Target Start/End: Original strand, 1692863 - 1692940
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacaga 546  Q
    ||||||||||||||||||| ||| |||||||||| ||||||   ||||| |||||||||||| ||||||| |||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattccatttagtgtcaatttcggtggactaagtctatacaga 1692940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 578 - 627
Target Start/End: Original strand, 3747730 - 3747779
Alignment:
Q  578 ggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 619
Target Start/End: Original strand, 26158837 - 26159001
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacag----agctttaaa 554  Q
    |||||||  ||||||||||| |||||||||  | ||||||||||| ||||||  | ||||||||||||||||| |||||||||||||     ||||  ||    
T  26158837 ttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtggg-taagtccatacagctctggcttagaa 26158935  T
Q  555 cgg-ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    ||| | |||||  |||||| | |||||||| ||| ||||||||||||| |  ||||||||||||||    
T  26158936 cggagcccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatacc 26159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 626
Target Start/End: Original strand, 54475798 - 54475878
Alignment:
Q  547 gctttaaacggggcc-ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||||||| |||  |||||| | |||||||||||| || ||||||||||||| ||||||| |||||| ||||||    
T  54475798 gctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 476 - 550
Target Start/End: Complemental strand, 53288874 - 53288799
Alignment:
Q  476 gagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||| | | |||||||| | ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  53288874 gagtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttcggtggactaagtccatacaaagctt 53288799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 576 - 626
Target Start/End: Original strand, 4048097 - 4048147
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| ||||||||||| |||| |||||||||||||| ||||||    
T  4048097 tgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 470 - 547
Target Start/End: Complemental strand, 6041840 - 6041762
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggctaagtccatacagag 547  Q
    ||||||||||||||||||||  | |  ||| ||| |||| ||||||||||||||||||||||  |||||||||||||||    
T  6041840 atcttggagtttgctcctctcaaggagtcatgttcgattgcccctagtgccaatttcggtggattaagtccatacagag 6041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 11390630 - 11390712
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||| |||||| | |  | |||||||||||| || || ||| |||||| |||||||||||||||||||||||||    
T  11390630 gatcttggagttttctcctccaaagatttcaggtttgatttcctctggtgtcaattttggtgggctaagtccatacagagctt 11390712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 542
Target Start/End: Original strand, 25017543 - 25017617
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccata 542  Q
    |||||||||||||||||||| | |  ||| ||||| ||||||  |||||| ||||||||||||||||||||||||    
T  25017543 gatcttggagtttgctcctccaaagatcttaggttcgattccatctagtgtcaatttcggtgggctaagtccata 25017617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 40777052 - 40777114
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggcta 534  Q
    ||||||| |||||||||  | |||||||||||||||| | |||||||||||||||||||||||    
T  40777052 ttggagtgtgctcctctcaaggtctcaggtttgattctctctagtgccaatttcggtgggcta 40777114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 494 - 550
Target Start/End: Complemental strand, 17579280 - 17579223
Alignment:
Q  494 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||||| || ||||||  ||||| |||||||||||||||||||||||||    
T  17579280 gtctcaggtttgatttcctctagtgttaattttggtgggctaagtccatacagagctt 17579223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 627
Target Start/End: Complemental strand, 32094813 - 32094756
Alignment:
Q  570 gggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||| ||||||||||||||||  |||||||| || |||||||||||||| |||||||    
T  32094813 gggtggtgggattggtcctctcatattagtcggttcttggatcggataccgagttttc 32094756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 547 - 627
Target Start/End: Original strand, 1178289 - 1178368
Alignment:
Q  547 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||| ||||||||    ||||| | |||||||||||| |||||||||||||| | |||||||||||||| |||||||    
T  1178289 gctttaaatggggccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 1178368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 515 - 551
Target Start/End: Original strand, 1242048 - 1242084
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1242048 gtgccaattttggtgggctaagtccatacagagcttt 1242084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 626
Target Start/End: Original strand, 4462749 - 4462829
Alignment:
Q  546 agctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||||||||||  |||||  | |||||||| ||| |||||||||||  ||| |||||| ||||||| ||||||    
T  4462749 agctttaaacggggccccgcaagtggacggtgggattgatccactcggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 547 - 618
Target Start/End: Complemental strand, 55371374 - 55371302
Alignment:
Q  547 gctttaaacggggccc-cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    |||| ||||||||||| ||  |||||| | |||||||||||| |||||||||||||||  |||||||||||||    
T  55371374 gcttaaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 626
Target Start/End: Complemental strand, 50731296 - 50731237
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||||||| ||| |||||||||||  |||||||||||||| ||||||    
T  50731296 agtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 626
Target Start/End: Original strand, 50781558 - 50781617
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||||||| ||| |||||||||||  |||||||||||||| ||||||    
T  50781558 agtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 576 - 618
Target Start/End: Complemental strand, 4252446 - 4252404
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    |||||||||||| |||||||||||||||  |||||||||||||    
T  4252446 tgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 579 - 625
Target Start/End: Original strand, 48105027 - 48105073
Alignment:
Q  579 gattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    |||||||||  ||||||||||||||| |||||||||||||| |||||    
T  48105027 gattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 460 - 552
Target Start/End: Complemental strand, 4252574 - 4252482
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttta 552  Q
    |||||||  ||||||||||| |||||||||  | |||||| ||||||||||| || ||||||||||| |||  | ||||||||||| |||||||    
T  4252574 ttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttcagtgatc-aagtccatacaaagcttta 4252482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 627
Target Start/End: Complemental strand, 33698786 - 33698705
Alignment:
Q  547 gctttaaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||||| ||||  | |||||| |||||||||||| |||  ||||||||||| | ||||||||| || |||||||    
T  33698786 gctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagttttc 33698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 460 - 544
Target Start/End: Original strand, 49167075 - 49167160
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca 544  Q
    |||||||  |||||||||||||||||||| | |  | ||||||| ||||| | || ||| |||||||||||| |||||||||||||    
T  49167075 ttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtcaatttcggtggactaagtccataca 49167160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 470 - 550
Target Start/End: Original strand, 55287832 - 55287913
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||| ||||||||||||  ||| || ||||||| ||||||| || |||||||||| | ||||||| ||||||||| |||||    
T  55287832 atcttagagtttgctccttcagaggtttcaggttcgattccctctggtgccaattttgatgggctaggtccatacaaagctt 55287913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 9e-36; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 469 - 625
Target Start/End: Original strand, 17935797 - 17935965
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||||          |||||||||||    
T  17935797 gatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtttgctctggctttaaacgg 17935896  T
Q  558 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    || |||||  |||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  17935897 ggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 4621415 - 4621236
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  4621415 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 4621316  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  4621315 tttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4621236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 24122042 - 24122220
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||| ||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  24122042 ttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 24122141  T
Q  549 tttaaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| ||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  24122142 tttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 619
Target Start/End: Original strand, 24674412 - 24674583
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  24674412 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 24674511  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||| ||||||||||| ||||||||||||||    
T  24674512 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggatacc 24674583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 7578428 - 7578607
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  |||||||||||||| ||||| ||| |||||||||| |||||||  | |||||||||||||||||||||||||||||| ||          |    
T  7578428 ttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctgac 7578527  T
Q  549 tttaaacggggccc-cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||||| ||  |||||||| |||||||||| | ||||||||||| ||||||||||||||||||| |||||||    
T  7578528 tttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagttttc 7578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 469 - 627
Target Start/End: Complemental strand, 7766896 - 7766726
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || |||| ||||||||||||||||||||||||||||          ||||||||||    
T  7766896 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaaacgg 7766797  T
Q  558 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    || |||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||| | |||||||    
T  7766796 ggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 470 - 627
Target Start/End: Complemental strand, 15059570 - 15059401
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacggg 558  Q
    ||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          ||||||||||||    
T  15059570 atcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg 15059471  T
Q  559 g-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    | |||||  |||||| | || ||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  15059470 gtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 460 - 619
Target Start/End: Complemental strand, 45859221 - 45859050
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca----------gagc 548  Q
    |||||||  |||||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||            ||    
T  45859221 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttgc 45859122  T
Q  549 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    ||||||| ||| |||||  |||||||| | |||||||||| ||||||||||| |||| ||||||||||||||    
T  45859121 tttaaacagggcccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcggatacc 45859050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 8077666 - 8077757
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||    
T  8077666 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt 8077757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 30677204 - 30677286
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||| |||||||||||||| | | |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  30677204 gatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagagctt 30677286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 46607838 - 46607920
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  46607838 gatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 46607920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 27455044 - 27454863
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||| | ||  |||||||||||||| ||||||||||||||||          ||    
T  27455044 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaatttcggtgagctaagtccatacagagcttgctctggc 27454945  T
Q  549 tttaaacggg---gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||    |||||   ||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  27454944 tttaaacgggccccccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagttttc 27454863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 9500533 - 9500442
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||    
T  9500533 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt 9500442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 37351639 - 37351548
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| | |||||||||||| ||||||  ||  |||||||||||||||||||||||||||||||||||    
T  37351639 ttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatgccaatttcggtgggctaagtccatacagagctt 37351548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 23734135 - 23734315
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  |||||| || |||||||||| ||| |||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||          |    
T  23734135 ttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcc 23734234  T
Q  549 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||  |||||  |||||| | ||  |||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  23734235 tttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23734315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 23741327 - 23741507
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  |||||| || |||||||||| ||| |||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||          |    
T  23741327 ttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcc 23741426  T
Q  549 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||  |||||  |||||| | ||  |||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  23741427 tttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23741507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 469 - 544
Target Start/End: Complemental strand, 46113571 - 46113495
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca 544  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || || |||||||||||||||||||||||||||    
T  46113571 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtaccaatttcggtgggctaagtccataca 46113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 626
Target Start/End: Complemental strand, 7197424 - 7197247
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| ||  |||||||||||||||| |||||| |||||||          ||    
T  7197424 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtggg-taagtcaatacagaccttgctctggc 7197326  T
Q  549 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||| |||||| |  |||||| | || ||||||||| ||||||||||||||||  ||||||||||||| ||||||    
T  7197325 tttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 7946863 - 7946954
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||||||| |||||||||||| ||| |||||| ||| ||||||| || |||||||||||||||||||||||| |||||||||||    
T  7946863 ttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagctt 7946954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 36156057 - 36155975
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| ||| || ||||||| ||||||| || |||||||||||||||||| |||||||| ||||||||    
T  36156057 gatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaatttcggtgggccaagtccatgcagagctt 36155975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 33905688 - 33905600
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||  ||||||||||||| |||||||||||||||    
T  33905688 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtatcaatttcggtgggttaagtccatacagag 33905600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 625
Target Start/End: Original strand, 34778361 - 34778535
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || || ||||||| |||||| |   ||||||||||          ||    
T  34778361 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtaccaattttggtgggtt---tccatacagagtttgctttggc 34778457  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    ||||||||||| |||||  |||||  | |||||||||||| || ||||||||||||| |||||||||||||| |||||    
T  34778458 tttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 469 - 547
Target Start/End: Complemental strand, 25237158 - 25237080
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||||||||||| ||||  | |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  25237158 gatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggc-aagtccatacagag 25237080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 619
Target Start/End: Original strand, 1378926 - 1379087
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| | | |||||| ||| |||| || || ||| ||||||||||||||||||||||||||||          |||||||||||    
T  1378926 gatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgctctggctttaaacgg 1379025  T
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    | |||||  |||||  | || ||||||||| ||| |||||||||||| || |||||||||||    
T  1379026 gcccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggatacc 1379087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 23232434 - 23232352
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||| ||||||||| || ||| || ||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  23232434 gatcttgaagtttgctcttccagaggtttcaggttcgattccctctggcgccaatttcggtgggctaagtccatacagagctt 23232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 460 - 544
Target Start/End: Original strand, 18646872 - 18646957
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca 544  Q
    ||||||| ||||||| ||||||||| ||| ||| |||||||||| ||||| | || |||||||||||||||||||||||| |||||    
T  18646872 ttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtctataca 18646957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 469 - 544
Target Start/End: Original strand, 809250 - 809325
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggctaagtccataca 544  Q
    ||||||||||||| |||||||  | ||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  809250 gatcttggagtttactcctcttaaggtctcaggtttgattacccctagtgtcaatttcggtgggc-aagtccataca 809325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 32729564 - 32729742
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||| ||||||||||||||  | |||||||||| |||||||  | |||||||||||||||||| |||||||||||||          ||    
T  32729564 ttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggc-aagtccatacagagcttgctctggc 32729662  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |||| |||||  |||||| | |||||||| ||| || |||||||||| | ||||||||||||||| |||||||    
T  32729663 tttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagttttc 32729742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 168220 - 168311
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||| |||||||||| |  | | |||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||    
T  168220 ttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctt 168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 8779905 - 8779823
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||| ||| ||| ||||||| || |||| |  |||||| |||||||||||||||||||||||||| |||||    
T  8779905 gatcttggagtttgcttctccagaggtctcagcttcgatttcttctagtgtcaatttcggtgggctaagtccatacacagctt 8779823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 18533893 - 18533811
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||| ||||||||||||| ||| || |||| |||||||| | ||||||||||||||| ||| ||||||||||| |||||||    
T  18533893 gatcttagagtttgctcctccagaggtatcagatttgattctctctagtgccaatttcgatggactaagtccatatagagctt 18533811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 472 - 549
Target Start/End: Original strand, 39964543 - 39964621
Alignment:
Q  472 cttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagct 549  Q
    |||||||| |||||||||  | |||||||||||||||||| || ||||||||||||||||||| ||| || ||||||||    
T  39964543 cttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtgggctgagttcacacagagct 39964621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 544
Target Start/End: Original strand, 2272372 - 2272448
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccataca 544  Q
    |||||| ||||||||||||  ||| |||||||||||||||||| ||  ||||||||||| |||||||||| ||||||    
T  2272372 gatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaatttcgctgggctaagttcataca 2272448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 550
Target Start/End: Original strand, 21726759 - 21726839
Alignment:
Q  471 tcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||| |||||||||||| ||| |||||||||| |||||||  | |||||||||||| |||| |||||||||| |||||||    
T  21726759 tcttgaagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcgatgggttaagtccatatagagctt 21726839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 575 - 626
Target Start/End: Original strand, 5315477 - 5315528
Alignment:
Q  575 atgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||| ||||||    
T  5315477 atgggattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 580 - 627
Target Start/End: Original strand, 14603947 - 14603994
Alignment:
Q  580 attggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagttttc 14603994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 16749153 - 16749228
Alignment:
Q  8 aagggaatgttaattgggcaatagaatttgaaattagcatatagtttttcatgtggtgattttggttcatatgtgt 83  Q
    ||||||||| |||||||||||||  ||||||||| |||||| ||||||   | |||||||||||||||||| ||||    
T  16749153 aagggaatgataattgggcaatatcatttgaaatgagcatacagttttaattttggtgattttggttcatacgtgt 16749228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 494 - 551
Target Start/End: Original strand, 16539661 - 16539718
Alignment:
Q  494 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    |||||||||||||||||| || |||||||||| ||||||| ||||||||||||||||||    
T  16539661 gtctcaggtttgattccctctggtgccaattttggtgggc-aagtccatacagagcttt 16539718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 530
Target Start/End: Complemental strand, 20487359 - 20487297
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgg 530  Q
    |||||||||||||||||||| ||| |||||| ||| ||||||| || ||||||||||||||||    
T  20487359 gatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 20487297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 576 - 626
Target Start/End: Original strand, 23041669 - 23041719
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  23041669 tgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 548 - 626
Target Start/End: Complemental strand, 26513226 - 26513148
Alignment:
Q  548 ctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||| ||||   |||||| | ||||| |||||| |||||||||||||||| |||||||| ||||| ||||||    
T  26513226 ctttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 549 - 627
Target Start/End: Original strand, 27159205 - 27159283
Alignment:
Q  549 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||||  |||||  | |||||||||||| ||| ||||||||||| ||||||||||||| | |||||||    
T  27159205 tttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttttc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 548 - 626
Target Start/End: Complemental strand, 40802147 - 40802069
Alignment:
Q  548 ctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||| |||||  |||||||| || |||||||||||| | ||||||||||| ||| |||| ||||| ||||||    
T  40802147 ctttaaacgggtccccgcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 460 - 551
Target Start/End: Original strand, 1138598 - 1138689
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    |||||||  ||||||||||| |||||||||  | |||| ||||| || || | ||||||||||||||||||| | ||||||||||||||||||    
T  1138598 ttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggac-aagtccatacagagcttt 1138689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 472 - 551
Target Start/End: Original strand, 37047023 - 37047102
Alignment:
Q  472 cttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    |||||||| |||||||||  | ||||||||||||||| ||||| || | ||||| |||||||| |||||||||||||||||    
T  37047023 cttggagtgtgctcctctcaaggtctcaggtttgattccccctggtacaaattttggtgggct-agtccatacagagcttt 37047102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 19034555 - 19034473
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    |||||||||||||| ||||| | | || ||||||| ||||  | || |||||||||||||||||| ||||||||||||||||||    
T  19034555 gatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaatttcggtgggc-aagtccatacagagcttt 19034473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 618
Target Start/End: Complemental strand, 40145940 - 40145889
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    |||||||| || | ||||||| |||||||||||||||| |||||||||||||    
T  40145940 agtgggtggtgagtttggtcccctcggattagtcgattcttggatcggatac 40145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 550
Target Start/End: Complemental strand, 40146016 - 40145973
Alignment:
Q  507 ttcccctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||| |||||||||||||  ||||||||||||||||||||||||    
T  40146016 ttcctctagtgccaatttatgtgggctaagtccatacagagctt 40145973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 550
Target Start/End: Complemental strand, 45331740 - 45331709
Alignment:
Q  519 caatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||||||||||||||||||||||    
T  45331740 caatttcggtgggctaagtccatacagagctt 45331709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 576 - 618
Target Start/End: Complemental strand, 8779786 - 8779744
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    |||||||||||| |||||||||||||||| || ||||||||||    
T  8779786 tgggattggtcccctcggattagtcgattcttagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 567 - 625
Target Start/End: Complemental strand, 37351512 - 37351454
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    |||||| | |||||||||||| ||||||||||||| |  |||||||||||||| |||||    
T  37351512 agtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 627
Target Start/End: Complemental strand, 8254832 - 8254751
Alignment:
Q  547 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||||||| | | ||||| | |||||||| ||| || | ||||||||||| ||| |||||||||| |||||||    
T  8254832 gctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagttttc 8254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 470 - 550
Target Start/End: Original strand, 32930778 - 32930859
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||| |||||  ||| |||||| ||| |||| || || ||||| |||| |||||||||||||||| ||||||||    
T  32930778 atcttggagtttactccttcagaggtctcaagttcgatttcctctggtgcccattttggtgggctaagtccatgcagagctt 32930859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 627
Target Start/End: Original strand, 48699876 - 48699957
Alignment:
Q  547 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| ||||| | | ||||| | |||||||| |||  ||||||||||||||| |||||||||||| | |||||||    
T  48699876 gctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttc 48699957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 548
Target Start/End: Complemental strand, 49101806 - 49101730
Alignment:
Q  472 cttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacagagc 548  Q
    |||||||| |||||||||  | |||| |  ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  49101806 cttggagtgtgctcctctcaaggtcttacatttgattccccctggtgccaatt-cggtgggctaagtccatacagagc 49101730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 3e-35; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 39349279 - 39349458
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  39349279 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 39349378  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  39349379 tttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 4718668 - 4718847
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  4718668 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 4718767  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  4718768 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 34237833 - 34237654
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  34237833 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 34237734  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||| | | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  34237733 tttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34237654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 19471632 - 19471812
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || |||||||||| |||| ||||||||||||||||          ||    
T  19471632 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggc 19471731  T
Q  549 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||  |||||  |||||| |||||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  19471732 tttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19471812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 19542556 - 19542736
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || |||||||||| |||| ||||||||||||||||          ||    
T  19542556 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggc 19542655  T
Q  549 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||  |||||  |||||| |||||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  19542656 tttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 19590140 - 19589960
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || |||||||||| |||| ||||||||||||||||          ||    
T  19590140 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggc 19590041  T
Q  549 tttaaacgggg--ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||  |||||  |||||| |||||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  19590040 tttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19589960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 460 - 625
Target Start/End: Original strand, 28193497 - 28193674
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||| ||||||||||||||          ||    
T  28193497 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctctggc 28193596  T
Q  549 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    |||||||||||||||    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  28193597 tttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 459 - 627
Target Start/End: Complemental strand, 8765705 - 8765525
Alignment:
Q  459 attggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------g 547  Q
    ||||||||  |||||||||||||||||| | |||  ||||||||| ||||||| || |||||||||||| |||||||||||||||||||          |    
T  8765705 attggcttgagatcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctctgg 8765606  T
Q  548 ctttaaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||| ||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  8765605 ctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 3734801 - 3734622
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  3734801 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 3734702  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  | ||||   |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  3734701 tttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 21603253 - 21603431
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||| ||||||||||||| ||| |||||||||| |||||||  | |||||||||||||||||||||| |||||||||          ||    
T  21603253 ttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggc 21603352  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  21603353 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 469 - 626
Target Start/End: Complemental strand, 42643287 - 42643118
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaac-g 556  Q
    |||||||||||||||||||| ||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||          ||| |||| |    
T  42643287 gatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtcttgaaacgg 42643188  T
Q  557 gggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||  |||||| | |||||||||||| |||| |||||| |||| |||||||||||||| ||||||    
T  42643187 gggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 2618209 - 2618388
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| ||||  |||| ||||||| || ||||||||||| ||||||||||||||||||||          ||    
T  2618209 ttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggc 2618308  T
Q  549 tttaaacgg-ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||| | |||||  |||||| | |||||||||||| |||||||||||||||| ||||||||||| || |||||||    
T  2618309 tttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagttttc 2618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 14632977 - 14633156
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || |||||||||||||||||||||||| |||||||          ||    
T  14632977 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctggc 14633076  T
Q  549 tttaaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||| ||||| ||  ||   |||||| | |||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  14633077 tttgaacggagcgtccacaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagttttc 14633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 459 - 626
Target Start/End: Original strand, 20469939 - 20470117
Alignment:
Q  459 attggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------g 547  Q
    ||||||||  |||||||||||||||||||| ||| |||||||||| ||||||| |||| |||||||| | |||||||||||||||||||          |    
T  20469939 attggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagagccaatttagatgggctaagtccatacagagcttgctctgg 20470038  T
Q  548 ctttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||| | | |||||  |||||| | |||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  20470039 ctttaaacagagcccccgcaagtgggcggtgggattggttc-ctcggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 42328028 - 42328206
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  ||||||||||||| |||||| ||| || ||||||||||||||| ||  |||||||||||||||||||||||||||||||          ||    
T  42328028 ttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggc 42328126  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| ||||   |||||  |||||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  42328127 tttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 42328206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 469 - 627
Target Start/End: Original strand, 32879311 - 32879481
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagct----------ttaaacgg 557  Q
    |||||| ||||||| ||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||          ||||||||    
T  32879311 gatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctgacattaaacgg 32879410  T
Q  558 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    || ||||   |||||| | |||||||||||| |||||||||||||||| |||||| ||||||| |||||||    
T  32879411 ggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 32879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 15259575 - 15259493
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||| |||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  15259575 gatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 15259493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 27746504 - 27746422
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| | | |||||||||| ||||||| | | |||||||||||||||||||||||||||||||||||    
T  27746504 gatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt 27746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 264577 - 264486
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||| ||||||||||||| |||  ||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  264577 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt 264486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 651344 - 651435
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||| ||||||||||||| |||  ||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  651344 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt 651435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 837079 - 837170
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||| ||||||||||||| |||  ||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  837079 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt 837170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 18532130 - 18532217
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacaga 546  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||||||  || || ||||||||||||||||||||||||||||    
T  18532130 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtcaatttcggtgggctaagtccatacaga 18532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 547 - 627
Target Start/End: Complemental strand, 2639491 - 2639410
Alignment:
Q  547 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||||||| | | ||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  2639491 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 469 - 625
Target Start/End: Complemental strand, 7558112 - 7557952
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtcc----atacagagctttaaacggggcccc 563  Q
    |||||||||||||||||||| ||| ||||||| || || |||| || |||||||||| ||||||||||||||     | | | |||||||||||  ||||    
T  7558112 gatcttggagtttgctcctccagaagtctcagattcgatttcctctggtgccaattttggtgggctaagtccgcttgttctg-gctttaaacggaccccc 7558014  T
Q  564 gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    |  |||||  | |||||||||||| |||| ||||||||||||||| |||||||||| |||||    
T  7558013 gcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 20305931 - 20306110
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||| ||||||||||||| | | ||||||| || ||||||  || |||||||||||| |||||||||||||||||||          ||    
T  20305931 ttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggc 20306030  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  20306031 tttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 20306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 21092564 - 21092743
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||| ||||||||||||| | | ||||||| || ||||||  || |||||||||||| |||||||||||||||||||          ||    
T  21092564 ttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggc 21092663  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||| ||||||||||  |||||||||||||| |||||||    
T  21092664 tttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 21092743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 469 - 627
Target Start/End: Complemental strand, 4698892 - 4698722
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||  ||| |||||||||| ||||||| || ||| |||||||||||||||||||||||  |||          |||||||||||    
T  4698892 gatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctctggctttaaacgg 4698793  T
Q  558 -ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
     | |||||  |||| | | |||||||||||| ||||||||||||||||  ||||| ||||||| |||||||    
T  4698792 agcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagttttc 4698722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 26169017 - 26168936
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||||  | ||||||||||||||||| |||  ||||||||||||||||| |||| ||||||||||||    
T  26169017 gatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggc-aagttcatacagagctt 26168936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 2166731 - 2166811
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||| ||| | | |||||||||| ||||||| | ||||||||||| || |||||||||||||||||||||    
T  2166731 gatcttggagtttgcttctccaaaggtctcaggttcgattccc-tcgtgccaatttcagtaggctaagtccatacagagctt 2166811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 494 - 550
Target Start/End: Complemental strand, 6953151 - 6953094
Alignment:
Q  494 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  6953151 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 6953094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 626
Target Start/End: Original strand, 25248469 - 25248547
Alignment:
Q  547 gctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| || ||  |||||| | |||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  25248469 gctttaaacgggccctcgcaagtgggcggtgggattggtcccctcggattagtcgattttt-gatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 460 - 551
Target Start/End: Complemental strand, 34639384 - 34639294
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    |||||||  ||||||||||| |||||||||  | |||||||| | ||| || || ||||||||||||||||| |||||||||||||||||||    
T  34639384 ttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcgatccctctggtgccaatttcggtggg-taagtccatacagagcttt 34639294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 24018414 - 24018496
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| | | |||| ||||| |||| || ||| || ||||||| ||||||||||||||||||||||||    
T  24018414 gatcttggagtttgctcctccaaaggtctgaggttcgatttcctctaatgtcaatttcagtgggctaagtccatacagagctt 24018496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 626
Target Start/End: Original strand, 18128634 - 18128714
Alignment:
Q  547 gctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||||||||| | | ||||| | |||||||||||||||| ||||||||| || |||||||| ||||| ||||||    
T  18128634 gctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 469 - 532
Target Start/End: Original strand, 15974937 - 15975000
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggc 532  Q
    ||||||||||| |||||||||  | |||||| ||| |||||||||||||| |||||||||||||    
T  15974937 gatcttggagtatgctcctctcaaggtctcaagttcgattcccctagtgcaaatttcggtgggc 15975000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 34610865 - 34610774
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||| |||||||||| || || |||||||| ||||| ||||||| ||  ||||||||||||||| ||||||| |||||||||||    
T  34610865 ttggcttaggattttggagtttgttcatccagatgtctgaggttcgattccctctgatgccaatttcggtggtctaagtctatacagagctt 34610774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 9047447 - 9047365
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| | | || | | ||||||||||| ||| ||||||||| ||||| ||||||||||||| |||||    
T  9047447 gatcttggagtttgctcctccaaaggttttaagtttgattccctctaatgccaattttggtggactaagtccatacaaagctt 9047365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 580 - 626
Target Start/End: Original strand, 9713609 - 9713655
Alignment:
Q  580 attggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||| |||||||||||||||| |||||||||||||| ||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 28088318 - 28088400
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||| || || ||| ||||||| || ||||||| | | || ||||||||||||| ||||||||||||||||||    
T  28088318 gatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttcggtgggttaagtccatacagagctt 28088400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 472 - 534
Target Start/End: Complemental strand, 40137000 - 40136938
Alignment:
Q  472 cttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggcta 534  Q
    |||||||| |||||||||  | |||||||||||||||| ||  ||||||||||||||||||||    
T  40137000 cttggagtgtgctcctctcaaggtctcaggtttgattctcccggtgccaatttcggtgggcta 40136938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 469 - 549
Target Start/End: Original strand, 28964065 - 28964146
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagct 549  Q
    |||||| ||||||||||||||  | || ||| ||| ||||||  || ||||||||||||||||||||||||||||| |||||    
T  28964065 gatcttagagtttgctcctcttaaggtttcatgttcgattccatctggtgccaatttcggtgggctaagtccatacggagct 28964146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 626
Target Start/End: Original strand, 2166838 - 2166897
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||||||| ||| ||||||||||||||| ||| ||||||| ||||||    
T  2166838 agtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 550
Target Start/End: Original strand, 21667629 - 21667664
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||| |||||||||||||||||||||||||||||||    
T  21667629 gtgctaatttcggtgggctaagtccatacagagctt 21667664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 627
Target Start/End: Original strand, 33747037 - 33747084
Alignment:
Q  580 attggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |||||||||||||||||  |||||||||||||| |||||||    
T  33747037 attggttctctcggattagtcgatccttggatcggataccgagttttc 33747084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 627
Target Start/End: Complemental strand, 34610733 - 34610686
Alignment:
Q  580 attggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  34610733 attggtcccctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 576 - 626
Target Start/End: Complemental strand, 6953057 - 6953008
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| |||||||||||||||| |||||||| ||||| ||||||    
T  6953057 tgggattggtcc-ctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 34694746 - 34694681
Alignment:
Q  468 tgatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggc 532  Q
    ||||||||||||||||||||||  | |||| ||||| ||||||  || ||||||||||||||||||    
T  34694746 tgatcttggagtttgctcctctcaaggtcttaggttcgattccatctggtgccaatttcggtgggc 34694681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 3e-35; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 40059030 - 40058851
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||||||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          ||    
T  40059030 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 40058931  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  40058930 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 469 - 627
Target Start/End: Complemental strand, 34844927 - 34844757
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          |||||||||||    
T  34844927 gatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgg 34844828  T
Q  558 gg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    || |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  34844827 ggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 460 - 625
Target Start/End: Original strand, 52983638 - 52983815
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||| ||||||||||||||||||||          ||    
T  52983638 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggc 52983737  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  52983738 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 460 - 624
Target Start/End: Complemental strand, 20078162 - 20077986
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||          ||    
T  20078162 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggc 20078063  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtt 624  Q
    ||||||||||| |||||  |||||| | ||||||| || | |||||||||||||||| |||||||||||||| ||||    
T  20078062 tttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 27528973 - 27528794
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  27528973 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 27528874  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||| |||||| |||||  |||||| | || ||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  27528873 tttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 32986216 - 32986395
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||  |||||| || |||||||||||||||||||||||||||||||||          |    
T  32986216 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgac 32986315  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |||| |||||  |||||| | |||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  32986316 tttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 46714411 - 46714591
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccccta--gtgccaatttcggtgggctaagtccatacaga----------g 547  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| ||||   ||||||||||||||||||||||||||||||||          |    
T  46714411 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgggctaagtccatacagagcttgcccttg 46714510  T
Q  548 ctttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||| |||||  |||||| | |||||||||||| |||||||||||| ||| ||| |||||||||| |||||||    
T  46714511 ctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagttttc 46714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 460 - 626
Target Start/End: Complemental strand, 33696457 - 33696279
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||  |||||| || ||||||||||||||||||||||||||||||||          ||    
T  33696457 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 33696358  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| |||| |||||  |||||| | || |||||||||||||||||||||| ||| |||||||||||| | ||||||    
T  33696357 tttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 496 - 626
Target Start/End: Original strand, 34723854 - 34723996
Alignment:
Q  496 ctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccggga-gtgggtgatgggattg 583  Q
    |||||||| ||||||| || |||||||||||||||||||||||||||||| |||||          ||||||||||||| | | ||||||| ||||||||    
T  34723854 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattg 34723953  T
Q  584 gtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  34723954 gtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 469 - 619
Target Start/End: Complemental strand, 43719234 - 43719094
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacggggccccggga 567  Q
    |||||||||||||||||||| ||| || ||||||| ||||| | ||||||| |||||||||||||||||||||||||||||           |||||  |    
T  43719234 gatcttggagtttgctcctccagaggtttcaggttcgattctctctagtgctaatttcggtgggctaagtccatacagagc-----------ccccgaaa 43719146  T
Q  568 gtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    ||||| | ||||||||||| ||||||||||||||||| ||||||||||||||    
T  43719145 gtgggcggtgggattggtcatctcggattagtcgattcttggatcggatacc 43719094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 19660710 - 19660531
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattc-ccctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||| | ||  ||| |||||||||||| ||||||||||||||          ||    
T  19660710 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatgcaaatttcggtgggataagtccatacagagcttgctctggc 19660611  T
Q  549 tttaaac-ggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||| ||| |||||  |||||| | |||||||| ||| |||||||||||||||| |||||||||||||| |||||||    
T  19660610 tttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 19660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 25852233 - 25852324
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  25852233 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 25852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 469 - 618
Target Start/End: Original strand, 49287886 - 49288046
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||| | || |||||||||||||||||||||||||||||| |          |||||||||||    
T  49287886 gatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgctatggctttaaacgg 49287985  T
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggatac 618  Q
    |  ||||  |||||| | || ||||||||| |||||||||||||||| ||||||| |||||    
T  49287986 gctcccgcaagtgggcgctgagattggtcccctcggattagtcgattcttggatcagatac 49288046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 54127520 - 54127341
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| | | ||||||||||  |||||| || |||||||||||||||||||||||| |||||||          ||    
T  54127520 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctggc 54127421  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| ||||||||||||| || ||||| |||||||  |||||||    
T  54127420 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactgagttttc 54127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 22625248 - 22625157
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||||||||||||| |||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  22625248 ttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 22625157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 13550236 - 13550318
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||| |||||||||||||||||| ||||||||  | |||||| |||||||||||||||||||||||||||||||| ||||||    
T  13550236 gatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgggctaagtccataccgagctt 13550318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 5609380 - 5609201
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  ||||||||||||||||| |  ||  |||||||||| ||||| | || ||||||||||||||||||||||||||||||||          ||    
T  5609380 ttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 5609281  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |||| |||||  |||||  | |||||||| ||| |||||||||||||||| |||||||||||||| |||||||    
T  5609280 tttaaatggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 5609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 473 - 625
Target Start/End: Complemental strand, 20527198 - 20527035
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc----------tttaaacggggcc 561  Q
    |||||||||| ||||| ||| |||||| ||||||||||| || | |||||||||||||||||||||||||| |||||          ||||||| |||||    
T  20527198 ttggagtttgttcctccagaggtctcaagtttgattccctctggcgccaatttcggtgggctaagtccatatagagcttgatttcggtttaaacagggcc 20527099  T
Q  562 ccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttt 625  Q
    |||  |||||| | | |||||||||  ||||||||||||||||||||||||  ||||| |||||    
T  20527098 ccgtaagtgggcggtaggattggtctcctcggattagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 20566368 - 20566547
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtc-tcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------g 547  Q
    |||||||  |||||||||||||||||||| ||| ||  ||||||| ||||||| || |||||||||||||||||| |||||||||||||          |    
T  20566368 ttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctgg 20566467  T
Q  548 ctttaaacgg-ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||| | |||||  |||||| | |||||||||||| ||| |||||||||||| |||||||||||| | ||||||    
T  20566468 ctttaaacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 35229187 - 35229277
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||    
T  35229187 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttcta-tgccaatttcggtgggctaagtccatacatagctt 35229277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 473 - 627
Target Start/End: Complemental strand, 36131675 - 36131509
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacagag----------ctttaaacggg-gc 560  Q
    |||||||| | ||||| |||||||||||||| |||||||  | |||||||||||||||| ||||||||||||||||          |||||||||||  |    
T  36131675 ttggagttcgttcctccagatgtctcaggttcgattccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaaacgggacc 36131576  T
Q  561 cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||  |||||| | |||||||||||| |||||||||||||||| || |||| |||||| |||||||    
T  36131575 cccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagttttc 36131509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 494 - 627
Target Start/End: Original strand, 32990488 - 32990633
Alignment:
Q  494 gtctcaggtttgattcccct-agtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg-ccccgggagtgggtgatgggat 581  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||          ||||||||||||| |||||  |||||| | ||||||    
T  32990488 gtctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggat 32990587  T
Q  582 tggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |||||| ||||||||| |||||||| ||||  |||||||    
T  32990588 tggtcccctcggactagtcgattcttggatcgaatactgagttttc 32990633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 33992654 - 33992736
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| ||| |||| ||||| ||||| | || |||||||||||||||||||||||||||||| |||||    
T  33992654 gatcttggagtttgctcctccagaggtcttaggttcgattctctctggtgccaatttcggtgggctaagtccatacatagctt 33992736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 1985855 - 1985943
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||||||  | |||| ||||||| ||||||||||||||||||||    
T  1985855 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgcgaatttcgatgggctaagtccatacagag 1985943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 494 - 617
Target Start/End: Complemental strand, 9517785 - 9517650
Alignment:
Q  494 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccgggag-tgggtgatgggat 581  Q
    |||||||||| ||||| | || ||||||||||| ||||||||||||||||||||||||          ||||||||||||| | || |||||| || |||    
T  9517785 gtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgagat 9517686  T
Q  582 tggtcctctcggattagtcgatttttggatcggata 617  Q
    |||||| |||||||||||||||| ||||||||||||    
T  9517685 tggtcccctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 44343533 - 44343712
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  |||||||||||||||||| | | | | |||| ||| ||||||| || |||| ||||| |||||||||||||||||||||||||            
T  44343533 ttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgctaattttggtgggctaagtccatacagagcttgctctgac 44343632  T
Q  551 --taaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
      |||||||||| ||||  |||||| | |||||||||||| |||| ||||||||||| ||| |||||||||| |||||||    
T  44343633 tttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttttc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 35674919 - 35674828
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||||||||||||||||| || | | ||| |||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  35674919 ttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 35674828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 12500227 - 12500145
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||  | | |||||||||||||||||| || |||||||||||  ||||||||||||||||| |||||    
T  12500227 gatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagctt 12500145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 470 - 627
Target Start/End: Complemental strand, 45787871 - 45787703
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaac-gg 557  Q
    |||||||| |||||||||| |||  ||||||||| ||||||| ||  |||||||||| ||||||||||||||||||||          ||||||||| ||    
T  45787871 atcttgga-tttgctcctccagagatctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacagg 45787773  T
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    | |||||  |||||  | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  45787772 gcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 569 - 626
Target Start/End: Complemental strand, 55158400 - 55158343
Alignment:
Q  569 tgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  55158400 tgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 495 - 627
Target Start/End: Complemental strand, 18875659 - 18875516
Alignment:
Q  495 tctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccgggagtgggtgatgggattg 583  Q
    ||||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||          |||||||| ||||   |||||||  ||||||||    
T  18875659 tctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccacaagtgggtagtgggattg 18875560  T
Q  584 gtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
     ||| |||||||||||| ||||||||||| |||||| |||||||    
T  18875559 atcccctcggattagtcaatttttggatcagataccgagttttc 18875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 469 - 547
Target Start/End: Complemental strand, 13873464 - 13873385
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||||||||||||||  | | |||||||||| ||||||| || |||||||||||||| |||||||| |||||||||    
T  13873464 gatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttcggtaggctaagttcatacagag 13873385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 32942389 - 32942480
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||||||||||||| |||||| ||| || | ||||| ||||| | ||  |||||||||||||||||||||||||||||||||||    
T  32942389 ttggcttgagatcttggagtttactcctccagaggtttaaggttcgattctctctgatgccaatttcggtgggctaagtccatacagagctt 32942480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 567 - 617
Target Start/End: Original strand, 4064998 - 4065048
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggata 617  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  4064998 agtgggcggtgggattggtcccctcggattagtcgatttttggatcggata 4065048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 576 - 626
Target Start/End: Original strand, 23639771 - 23639821
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  23639771 tgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 576 - 626
Target Start/End: Original strand, 23645429 - 23645479
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  23645429 tgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 460 - 549
Target Start/End: Original strand, 34835548 - 34835638
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagct 549  Q
    |||||||  |||||| ||||||||||||||  | |||||| ||| ||||||| || ||| ||||||||||||||||||||||||| |||||    
T  34835548 ttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtcaatttcggtgggctaagtccatacggagct 34835638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 470 - 550
Target Start/End: Original strand, 2351042 - 2351123
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||| |||||||||||| ||| |||||||||| ||||||| || |||||||||||||| | |||| |||||||| |||||    
T  2351042 atcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtcgactaaatccatacatagctt 2351123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 582 - 627
Target Start/End: Complemental strand, 21387531 - 21387486
Alignment:
Q  582 tggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  21387531 tggtcccctcggattagtcgattattggatcggataccaagttttc 21387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 51535641 - 51535727
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggc----taagtccatacagagctt 550  Q
    |||||||||||||||||||| | | |||||||||| ||||||| || |||||||||| |||||||    ||||||||||||||||||    
T  51535641 gatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaattttggtgggctaattaagtccatacagagctt 51535727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 7392141 - 7392054
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||  |||||||||||||||||||| | | |||||||||| |||||||  | |||||||||||||| || |||||||||||||||    
T  7392141 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcggt-ggttaagtccatacagag 7392054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 551
Target Start/End: Complemental strand, 41621774 - 41621683
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    |||||||  |||||||||||||||||||||  | |||||| |||||| |||| || |||||||||| ||||||| || |||||||||||||||    
T  41621774 ttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtgggc-aaatccatacagagcttt 41621683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 515 - 550
Target Start/End: Complemental strand, 29875897 - 29875862
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||||||||||||||||||||||||||    
T  29875897 gtgccaatttcggtgggctaagtccatacagagctt 29875862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 567 - 626
Target Start/End: Original strand, 52494626 - 52494685
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  52494626 agtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 515 - 550
Target Start/End: Complemental strand, 55961875 - 55961840
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||||||||||||||||||||||||||    
T  55961875 gtgccaatttcggtgggctaagtccatacagagctt 55961840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 473 - 550
Target Start/End: Complemental strand, 13584419 - 13584341
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||| | | |||||| ||| ||||||| || ||| |||||||| ||||||||||||||| |||||||    
T  13584419 ttggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagctt 13584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 567 - 619
Target Start/End: Original strand, 37302625 - 37302677
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    |||||| ||||||||||||||  ||||||||||||||| ||| ||||||||||    
T  37302625 agtgggcgatgggattggtcccttcggattagtcgattcttgaatcggatacc 37302677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 626
Target Start/End: Original strand, 25852353 - 25852412
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||  ||||||||||||| ||||||||||||| || ||||| |||||||| ||||||    
T  25852353 agtgggcaatgggattggtcccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 619
Target Start/End: Original strand, 35229315 - 35229358
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||    
T  35229315 tgggattggtcccctcgaattagtcgattcttggatcggatacc 35229358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 473 - 535
Target Start/End: Original strand, 37455609 - 37455671
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaa 535  Q
    ||||||| |||||||||  | |||||||||| ||||||||| |||||||||||  ||||||||    
T  37455609 ttggagtatgctcctctcaaggtctcaggttcgattcccctggtgccaatttcaatgggctaa 37455671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 578 - 627
Target Start/End: Complemental strand, 23131484 - 23131435
Alignment:
Q  578 ggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||| ||||||||||| || ||||||||||| |||||||    
T  23131484 ggattggtcccctcgaattagtcgattcttcgatcggataccgagttttc 23131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 5e-34; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 469 - 626
Target Start/End: Original strand, 25293194 - 25293356
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccata---cagagctttaaacgggg--ccc 562  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||| ||||   | | |||||||||||||  |||    
T  25293194 gatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatagctctg-gctttaaacggggccccc 25293292  T
Q  563 cgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||  |||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  25293293 cgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 44946231 - 44946052
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| | | |||||||||||||||||||||||||||||||          ||    
T  44946231 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctctggc 44946132  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  44946131 tttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 33827751 - 33827572
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||| ||||||||| ||| |||||||||| ||||||| || |||||||||||| |||||||||||||||||||          ||    
T  33827751 ttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctctggc 33827652  T
Q  549 tttaaacggggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||| |  |||||| | |||||||||||| || ||||||||||||| |||||||||||||| |||||||    
T  33827651 tttaaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 472 - 627
Target Start/End: Original strand, 35171831 - 35171998
Alignment:
Q  472 cttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgggg- 559  Q
    ||||||||||||||||| ||| |||||||||| ||||||| || |  |||||||||||||||||||||||||||||          |||||||||||||     
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggc 35171930  T
Q  560 ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||  |||||| | |||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  35171931 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 10582168 - 10582077
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  10582168 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 10582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 469 - 627
Target Start/End: Original strand, 15037987 - 15038157
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| | | |||||||||| ||||||| | | |||||||||||||||||||||||||||||||          |||||||||||    
T  15037987 gatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacgg 15038086  T
Q  558 -ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
     | |||||  |||||| | |||||||||||| ||| |||||||||||| |||||||||||||| |||||||    
T  15038087 agcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 470 - 550
Target Start/End: Original strand, 17324795 - 17324876
Alignment:
Q  470 atcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  17324795 atcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 17324876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 34516586 - 34516413
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtccatacagagctt--------- 550  Q
    |||||||  |||||||||||||||||||| ||| || ||||||| |||||     |||  |||||||||||||||||||||||||||||||             
T  34516586 ttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattcg----gtggtaatttcggtgggctaagtccatacagagcttgctctcgct 34516491  T
Q  551 -taaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
     |||||||| ||| |  |||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  34516490 ttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 626
Target Start/End: Complemental strand, 11941388 - 11941210
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||  ||||||  | |||||||||| |||||| ||||||||||||||          ||    
T  11941388 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaattttggtgggttaagtccatacagagcttgctctggc 11941289  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||  |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  11941288 tttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 27290607 - 27290698
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctag-tgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| | | |||||||||||||||||||||||||||||||||||    
T  27290607 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagctt 27290698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 13266509 - 13266686
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  ||||||||| ||||||||| |||| |||||| ||| ||||| | || ||||||||| |||||| |||||||||||||||||||            
T  13266509 ttggcttgagatcttggaatttgctcctttagaggtctcatgttcgattcactctggtgccaattccggtggactaagtccatacagagcttgctctggc 13266608  T
Q  551 --taaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
      ||||||||||||||  ||||||| ||||||||||||| |||  ||||||||||| |||||||||||| | ||||||    
T  13266609 tttaaacggggccccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 469 - 627
Target Start/End: Original strand, 41314020 - 41314189
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------ctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || ||| |||||||||||||||||||| ||||||||          ||||||||||    
T  41314020 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagcttgctctgactttaaacgg 41314119  T
Q  558 ggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |  ||||  |||||  | |||||||||||| ||| ||||| |||||| || |||||||||||||||||||    
T  41314120 gatcccgcaagtggacggtgggattggtcccctcagattaatcgattcttcgatcggataccaagttttc 41314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 1191532 - 1191620
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||    
T  1191532 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccctctagtaccaatttcggtgggctaagtccatacagag 1191620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 36242490 - 36242311
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt-------- 550  Q
    |||||||  ||||||| | |||||||||| ||| |||||||||| ||||||| || ||| ||||||||||||||||||||||  ||||||||            
T  36242490 ttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctggc 36242391  T
Q  551 --taaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
      ||||||||| |||||  |||||| | |||||||||||| ||||||||| |||||| |||||||||||||||| |||||    
T  36242390 tttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccaaattttc 36242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 24196023 - 24196200
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  ||| |||| ||| ||||||| ||| || ||||||| ||||||| || |||| |||||||||||||||||||||||||||          ||    
T  24196023 ttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctctggc 24196122  T
Q  549 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||||  |||||| | |||||||||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  24196123 tttaaacggg-ccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagttttc 24196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 473 - 626
Target Start/End: Complemental strand, 30466995 - 30466830
Alignment:
Q  473 ttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaa-cggggc 560  Q
    |||||||||| ||||||||| |||||||||| ||||| | ||  |||||||||||||||||||||||||||||||          |||||||| |||| |    
T  30466995 ttggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaccgggcc 30466896  T
Q  561 cccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||  ||||||   ||||||||||||  ||||||||||||||| |||||||||||||| ||||||    
T  30466895 cccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 515 - 627
Target Start/End: Original strand, 3943815 - 3943938
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacagagctt----------taaacggggc-cccgggagtgggtgatgggattggtcctctcggattagtcgat 603  Q
    |||||||||||||| |||||||||||||||||||||          |||||||||| ||||  |||||||| |||||||||||| || |||||||||| |    
T  3943815 gtgccaatttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggt 3943914  T
Q  604 ttttggatcggataccaagttttc 627  Q
    | ||||||||||||||||||||||    
T  3943915 tattggatcggataccaagttttc 3943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 515 - 627
Target Start/End: Original strand, 28668948 - 28669071
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacagagctt----------taaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgat 603  Q
    |||||||||||||||| |||||||||||||||||||          |||||||||||||   | ||||| | |||||||||||| |||||||||||||||    
T  28668948 gtgccaatttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgat 28669047  T
Q  604 ttttggatcggataccaagttttc 627  Q
    |||||||||||||||| |||||||    
T  28669048 ttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 44976332 - 44976244
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||  |||||||| ||||||||||| ||| |||||||||| ||||||| || |||||||||| ||||||||||||||||||||||    
T  44976332 ttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagag 44976244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 469 - 604
Target Start/End: Original strand, 32845119 - 32845251
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctttaaacggggcccc-ggg 566  Q
    |||||||||||||||||||| | | || ||||||| ||||||| || ||||||||||||||||||||||||||||     |||||||| ||||||| |      
T  32845119 gatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttcggtgggctaagtccata-----ctttaaacagggcccctgca 32845213  T
Q  567 agtgggtgatgggattggtcctctcggattagtcgatt 604  Q
    |||||| | ||||||||||||  ||| |||||||||||    
T  32845214 agtgggcggtgggattggtcccttcgaattagtcgatt 32845251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 5394036 - 5394124
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||| |||||||| ||||||||||||||||||||    
T  5394036 ttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagag 5394124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 4567615 - 4567524
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  ||||||| |||||||||||  ||| |||||||||| |||| || || ||||||||||||||||||||| ||||||||||||||    
T  4567615 ttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctctggtgccaatttcggtgggctaaatccatacagagctt 4567524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 43374503 - 43374412
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||||| || |||||||||||||||||||||||  ||||| |||||    
T  43374503 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagctt 43374412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 8258925 - 8259003
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga 546  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||   |||||||| |||||| ||||||||||||||    
T  8258925 gatcttggagtttgctcctccagatgtctcaggttcgattccctctgacgccaattttggtgggttaagtccatacaga 8259003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 534 - 627
Target Start/End: Original strand, 14486929 - 14487023
Alignment:
Q  534 aagtccatacagagctttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||||||||||  ||||||||||| | | ||||| | |||||||||||| ||||||||||||| |  |||||||||||||| |||||||    
T  14486929 aagtccatacagagcttagaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 567 - 627
Target Start/End: Complemental strand, 2140545 - 2140485
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  2140545 agtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 459 - 550
Target Start/End: Original strand, 19054043 - 19054135
Alignment:
Q  459 attggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||  ||||||||||| |||||||| | | |||||||||||||||||  || |||  || ||||||||||||||||||||||||||||    
T  19054043 attggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattccttctggtgttaacttcggtgggctaagtccatacagagctt 19054135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 576 - 627
Target Start/End: Complemental strand, 4567479 - 4567428
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  4567479 tgggattggtcctctcggattagtcaattcttggatcggatacccagttttc 4567428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 45271403 - 45271494
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||| ||||||||| ||| ||| || ||| ||| ||||||| || ||||||||||| ||||||||||||||||||||||||    
T  45271403 ttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt 45271494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 494 - 547
Target Start/End: Complemental strand, 23787152 - 23787098
Alignment:
Q  494 gtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  23787152 gtctcaggtttgattccctctggtgccaatttcggtgggctaaatccatacagag 23787098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 549 - 626
Target Start/End: Original strand, 4852649 - 4852726
Alignment:
Q  549 tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||||||||  |||||  | ||| |||||||| ||||||||| |||||| ||||||||||| |||||||||    
T  4852649 tttaaacggggccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 551
Target Start/End: Complemental strand, 8192529 - 8192438
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagcttt 551  Q
    |||||||  ||||||||||| |||||||||  | |||||||||| ||||||| || |||||||| ||||||||| ||||||||| ||||||||    
T  8192529 ttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggc-aagtccatatagagcttt 8192438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 627
Target Start/End: Original strand, 18692098 - 18692158
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| | |||||||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  18692098 agtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 627
Target Start/End: Original strand, 19054164 - 19054224
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| | |||||||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  19054164 agtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagttttc 19054224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 627
Target Start/End: Original strand, 39957896 - 39957956
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |||||||||||| | |||||||||||||||| |||||| ||||||| |||||||    
T  39957896 agtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttc 39957956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 538
Target Start/End: Complemental strand, 6714459 - 6714380
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcc-cctagtgccaatttcggtgggctaagtc 538  Q
    |||||||  |||||||||||||||||||| ||| |||||||||||||||||  ||||    |||||||||||||||||||    
T  6714459 ttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattccatctagcattaatttcggtgggctaagtc 6714380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 460 - 539
Target Start/End: Complemental strand, 18976603 - 18976524
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattcccctagtgccaatttcggtgggctaagtcc 539  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||| |||||||   | |||||||||||||| ||||||||    
T  18976603 ttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgagccaatttcggtggactaagtcc 18976524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 576 - 627
Target Start/End: Complemental strand, 43374380 - 43374329
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||  ||||||||||||||| |||||||||||||| |||||||    
T  43374380 tgggattggtcccttcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 40997519 - 40997437
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattcccc-tagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| | | |||||| |||  ||||||| |||| |||||||||||| | |||||| |||||||||||    
T  40997519 gatcttggagtttgctcctccaaaggtctcatgttcaattccccctagtaccaatttcggtgagataagtcaatacagagctt 40997437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 460 - 548
Target Start/End: Complemental strand, 28194311 - 28194223
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc 548  Q
    |||||||  ||||||||||| |||||||||  | |||| ||||| ||||| | || |||||||||||||||||| |||||||||||||||    
T  28194311 ttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggc-aagtccatacagagc 28194223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 460 - 548
Target Start/End: Original strand, 40591202 - 40591290
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagc 548  Q
    |||||||  ||||||||||| |||||||||  | ||||||||||||| |||  || ||| |||||||||||||| |||||||||||||||    
T  40591202 ttggcttgagatcttggagtgtgctcctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggc-aagtccatacagagc 40591290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 578 - 619
Target Start/End: Original strand, 45132436 - 45132477
Alignment:
Q  578 ggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  45132436 ggattggtcctctcggattaatcgattcttggatcggatacc 45132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 567 - 619
Target Start/End: Complemental strand, 18976514 - 18976462
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggatacc 619  Q
    |||||| | |||||||||||| |||| ||||||||||| ||||||||||||||    
T  18976514 agtgggcggtgggattggtcccctcgaattagtcgattcttggatcggatacc 18976462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 19606023 - 19605936
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    |||||||  |||||||||||  ||||||||  | |||||||||| ||||||| ||| ||| ||||||||||||| ||||||||||||||    
T  19606023 ttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggc-aagtccatacagag 19605936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 550
Target Start/End: Complemental strand, 918819 - 918784
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||| |||||||||||||||||||||||    
T  918819 gtgccaatttcgttgggctaagtccatacagagctt 918784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 626
Target Start/End: Complemental strand, 27269403 - 27269344
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||| ||| |||||||||||||||| |||||| ||||||| ||||||    
T  27269403 agtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 627
Target Start/End: Original strand, 27290729 - 27290772
Alignment:
Q  584 gtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||| |||||||||||||||| |||||||||||||| |||||||    
T  27290729 gtcccctcggattagtcgattcttggatcggataccgagttttc 27290772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 550
Target Start/End: Complemental strand, 36390730 - 36390655
Alignment:
Q  476 gagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    ||||||||| ||| | | |||||||||| |||| || || |||||||||||||||| ||||||||||||| |||||    
T  36390730 gagtttgcttctccaaaggtctcaggttcgatttcctctggtgccaatttcggtggactaagtccatacaaagctt 36390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 576 - 626
Target Start/End: Complemental strand, 44929896 - 44929846
Alignment:
Q  576 tgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||||||||| || | ||||||||||| |||||||||||||| ||||||    
T  44929896 tgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 578 - 627
Target Start/End: Complemental strand, 1501511 - 1501463
Alignment:
Q  578 ggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||||||| |||||||||||||||| || ||||||||||| |||||||    
T  1501511 ggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 1501463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 460 - 552
Target Start/End: Original strand, 29698166 - 29698258
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttga-ttcccctagtgccaatttcggtgggctaagtccatacagagcttta 552  Q
    |||||||  ||||||||| |||||||||||  | |||||| |||| | |||| || ||| |||||||||||||| |||| ||||||||||||||    
T  29698166 ttggcttgggatcttggaatttgctcctctcaaggtctcaagttttatttcctctggtgtcaatttcggtgggc-aagttcatacagagcttta 29698258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 460 - 626
Target Start/End: Complemental strand, 7487 - 7309
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  |||||||||||||||||||| |||  ||||||||| ||||||| |  |||||||||||||||||||||||||||||||||          |    
T  7487 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctctggc 7388  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  7387 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 5260 - 5081
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| | | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  5260 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 5161  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  | |||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  5160 tttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 40344 - 40522
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||  ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||          ||    
T  40344 ttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 40443  T
Q  549 tttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||| |||||  |||||| | |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  40444 tttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagttttc 40522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 460 - 627
Target Start/End: Original strand, 161828 - 162007
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagc---------- 548  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||              
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 161927  T
Q  549 -tttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
     |||||  ||| |||||  |||||| | |||||||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  161928 ttttaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 162007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 5e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 460 - 626
Target Start/End: Complemental strand, 97544 - 97366
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag----------c 548  Q
    |||||||  ||||||| |||||||||||| | | |||||||||| ||||||| || |||||||||||||||||||||||||||||||||          |    
T  97544 ttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgac 97445  T
Q  549 tttaaacggg-gccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||||||  |||||  |||||| | ||||||||||||||||| |||||||| |||||||| |||||||| ||||||    
T  97444 tttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 460 - 627
Target Start/End: Complemental strand, 53049 - 52870
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gc 548  Q
    |||||||  |||||||||||||||||||| ||| |  ||||||| ||||||| || |||||||||||||||||| || ||||||||||          ||    
T  53049 ttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggc 52950  T
Q  549 tttaaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||||||||||||| | | ||||| | | ||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  52949 tttaaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagttttc 52870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 1234 - 1143
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  1234 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 1143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 9477 - 9386
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||    
T  9477 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 12178 - 12087
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| || || | ||||||||||||||||||||||||||||||||||    
T  12178 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagctt 12087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 480 - 627
Target Start/End: Original strand, 39131 - 39290
Alignment:
Q  480 ttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacggggccccggga- 567  Q
    ||||||||| ||| |||||| ||| ||||||| || |||||||||||||||||||| |||||||||||          ||||||||||||||||| | |     
T  39131 ttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaa 39230  T
Q  568 gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    ||||| | |||||||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  39231 gtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 39290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 10871 - 10780
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| |||| || || | ||||||||||||||||||||||||||||||||||    
T  10871 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagctt 10780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 469 - 627
Target Start/End: Complemental strand, 41813 - 41644
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacaga----------gctttaaacgg 557  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| || || ||||||||| || ||||||||||||||||          |||||||||||    
T  41813 gatcttggagtttgctcctccagaggtctcaggttcgattccctcttgttccaatttcgttgtgctaagtccatacagagcttgctctggctttaaacgg 41714  T
Q  558 ggcccc-gggagtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagttttc 627  Q
    |||||| |  ||||||  ||||||||||||| |||||||||||||||| || ||||||||||  |||||||    
T  41713 ggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattctt-gatcggatacagagttttc 41644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 136 - 48
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagag 547  Q
    ||||||| |||||||||||||||||| || ||| |||||||||| ||||||| ||  || |||||||| ||||||||||||||||||||    
T  136 ttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccctcttatgtcaatttcgatgggctaagtccatacagag 48  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 15019 - 15101
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||| ||| ||||||||||  |||||| || |||| |||||||||||| ||||||||| ||||||||    
T  15019 gatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgctaatttcggtgggttaagtccatccagagctt 15101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 515 - 626
Target Start/End: Complemental strand, 13166 - 13047
Alignment:
Q  515 gtgccaatttcggtgggctaagtccatacagag-------ctttaaacgggg-ccccgggagtgggtgatgggattggtcctctcggattagtcgatttt 606  Q
    ||||||||||||||||| |||||||||||||||       |||||||||||| |||||  |||||  | |||||||| ||| ||| ||||||| |||| |    
T  13166 gtgccaatttcggtgggttaagtccatacagagcttgctactttaaacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattct 13067  T
Q  607 tggatcggataccaagtttt 626  Q
    ||||||||||||| ||||||    
T  13066 tggatcggataccgagtttt 13047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 469 - 550
Target Start/End: Original strand, 20250 - 20332
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtccatacagagctt 550  Q
    |||||||||||||||||||  | | |||||||||||||||||| || |||||||||||  ||||||||||||||||| |||||    
T  20250 gatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagctt 20332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 460 - 626
Target Start/End: Original strand, 66781 - 66951
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgggctaagtc-catacagag-ctttaaacg 556  Q
    |||||||  |||||||||||||||||||| | | |||||| ||| ||||||  || |||||||||| ||||||||||||| | | |   | |||||||||    
T  66781 ttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaattttggtgggctaagtcgcttgctctggctttaaacg 66880  T
Q  557 gggccccggga-gtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    ||||||| | | ||||| | |||||||||||| ||||||||||||| |  |||||||||||||| ||||||    
T  66881 gggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 517 - 627
Target Start/End: Original strand, 32365 - 32485
Alignment:
Q  517 gccaatttcggtgggctaagtccatacagagctt----------taaacggggccccggga-gtgggtgatgggattggtcctctcggattagtcgattt 605  Q
    ||||||||||||||||||||||||||||||||||          |||| | |||||| | | ||||||| |||||||||||| ||||||||||||||||     
T  32365 gccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagtcgattc 32464  T
Q  606 ttggatcggataccaagttttc 627  Q
    || ||||||||||| |||||||    
T  32465 tt-gatcggataccgagttttc 32485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 567 - 626
Target Start/End: Complemental strand, 8510 - 8451
Alignment:
Q  567 agtgggtgatgggattggtcctctcggattagtcgatttttggatcggataccaagtttt 626  Q
    |||||| | |||||||||||| |||||||||||||||| || ||||||||||| ||||||    
T  8510 agtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 460 - 532
Target Start/End: Complemental strand, 8585 - 8512
Alignment:
Q  460 ttggcttttgatcttggagtttgctcctctagatgtctcaggtttgatt-cccctagtgccaatttcggtgggc 532  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||  | || ||||||||||||||||||    
T  8585 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaatttcggtgggc 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 516 - 626
Target Start/End: Complemental strand, 123172 - 123066
Alignment:
Q  516 tgccaatttcggtgggctaagtccatacagagctttaaacggggccccgggagtgggtgatgggattggtcctctcggattagtcgatttttggatcgga 615  Q
    ||||||||||||||||| |||||||||| |  |||  ||| |||||||   |||| ||| |||||||||||| ||||||||| ||||| || ||||||||    
T  123172 tgccaatttcggtgggc-aagtccatacgg--cttagaacagggccccacaagtgtgtggtgggattggtcccctcggattaatcgatctt-ggatcgga 123077  T
Q  616 taccaagtttt 626  Q
    |||||||||||    
T  123076 taccaagtttt 123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 530
Target Start/End: Complemental strand, 8348 - 8286
Alignment:
Q  469 gatcttggagtttgctcctctagatgtctcaggtttgattccc-ctagtgccaatttcggtgg 530  Q
    |||||||||||||||||||| ||| |||||| ||| ||||||| || ||||||||||||||||    
T  8348 gatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 8286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 623
Target Start/End: Complemental strand, 26648 - 26605
Alignment:
Q  580 attggtcctctcggattagtcgatttttggatcggataccaagt 623  Q
    |||||||| |||| |||||||||||||||||||| |||||||||    
T  26648 attggtcccctcgaattagtcgatttttggatcgaataccaagt 26605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University