View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4376_low_6 (Length: 308)
Name: NF4376_low_6
Description: NF4376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4376_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 290
Target Start/End: Original strand, 8843932 - 8844205
Alignment:
| Q |
18 |
atcctcatcttgcattaaatcatttaaatgtataggaaaatgttaataggtgtctttcacgcacacgaaacacatgttaataaactatgtataagatctc |
117 |
Q |
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| T |
8843932 |
atcctcatcttgcattaaatcatttaaatgtataggaaaatgttaatagatgtctttcacacacacgaaacacatgttaataaactatgtataagatctc |
8844031 |
T |
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| Q |
118 |
tnnnnnnngagctatgtataagaattttgtttaaaagtcgtatattaaattcttaaagatacactaattatttttcagtgtaaaatttctacttttgagt |
217 |
Q |
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| T |
8844032 |
taaaaaaagagctatgtataagaattttgtttaaaagtcgtatattaaattcttaaagatacactaattattttttagtgtaaaatttttacctttgagt |
8844131 |
T |
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| Q |
218 |
tctttaacacgtgtttt-ggggatctagaattgatgttgtacaaaagcacaaagtttcacaatgtaattaatca |
290 |
Q |
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||||||||| ||||||| |||||| | || |||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
8844132 |
tctttaacatgtgttttgggggatttggatttgatgttgtacaaaagcacaaagtttcacgatgtaattaatca |
8844205 |
T |
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