View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4378_low_2 (Length: 319)
Name: NF4378_low_2
Description: NF4378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF4378_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 18 - 308
Target Start/End: Original strand, 19278994 - 19279284
Alignment:
Q |
18 |
gtatcaactcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactgtttaacaaaagaggataattcgatcacaaatttcagtgtgaaag |
117 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
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|
T |
19278994 |
gtatcaactcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactgtttaacaaaagaggataatttgatcacaaattttagtgtgaaag |
19279093 |
T |
 |
Q |
118 |
agcttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatac |
217 |
Q |
|
|
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
19279094 |
agcttgataagctagtttatcttcatggagctatatgtgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatat |
19279193 |
T |
 |
Q |
218 |
actacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatggggtgatgat |
308 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
19279194 |
actacctagtggagaccatgttagtctaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatggggtgatgat |
19279284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 21 - 308
Target Start/End: Complemental strand, 13271949 - 13271662
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactgtttaacaaaagaggataattcgatcacaaatttcagtgtgaaagagc |
120 |
Q |
|
|
||||||||||||| ||| ||||||||| |||||||||||||||| | | | ||| ||||| ||||||| |||| ||||| ||||| | ||| || | |
|
|
T |
13271949 |
tcaactcatcctaatgtggaagcaaaacttattcaagagatcaaagatcattgtctaacacaagaggagaatttgatcaataatttaaatgttgaaaaca |
13271850 |
T |
 |
Q |
121 |
ttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacact |
220 |
Q |
|
|
|||||||||| |||||||||||| |||||||| |||| |||| || |||||||| ||| |||||||||| |||||||||||||||||||| |||| ||| |
|
|
T |
13271849 |
ttgataagctgatttaccttcatgcagctatatgtgaaaccttgagactttatcctcctataccatttgatcacaagtgtgcagttaattctgatatact |
13271750 |
T |
 |
Q |
221 |
acctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatggggtgatgat |
308 |
Q |
|
|
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| |
|
|
T |
13271749 |
acctagtggacaccatgttggtccaaacacaaagttaatatactctttgtatgcaatgggaagaatggaacatgtatggggtggtgat |
13271662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 45 - 301
Target Start/End: Original strand, 13080718 - 13080974
Alignment:
Q |
45 |
aaaattattcaagagatcaaggttaactgtttaacaaaagaggataattcgatcacaaatttcagtgtgaaagagcttgataagctagtttaccttcatg |
144 |
Q |
|
|
|||||||||||||||||||| | ||| ||||||| | | || || |||| ||| | ||||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
13080718 |
aaaattattcaagagatcaaagataattgtttaaaacacgatgagaattttatcgctaatttaggtgtggaagagcttgataagctagtttaccttcatg |
13080817 |
T |
 |
Q |
145 |
gagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacactacctagtggagaccatgttagtcc |
244 |
Q |
|
|
|||| |||| ||||||||||||||| ||||| ||||| ||||| | ||||||||||| | || || |||| ||| ||||||||||||||||||||||| |
|
|
T |
13080818 |
gagccatatgtgaagccttaaggctatatccttctgtagcatttcagcacaagtgtgctatcaaatcggataaacttcctagtggagaccatgttagtcc |
13080917 |
T |
 |
Q |
245 |
aaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
T |
13080918 |
aaatacaaagttaatatattctttgtatgcaatgggaaggatggagcaaatatgggg |
13080974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 114 - 301
Target Start/End: Original strand, 12963797 - 12963984
Alignment:
Q |
114 |
aaagagcttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccg |
213 |
Q |
|
|
|||| |||||||||||| ||||| |||||||||||||| | |||||| |||||||||||||| ||| ||||||||||||||||||||||| |||| || | |
|
|
T |
12963797 |
aaagggcttgataagcttgtttatcttcatggagctatttgtgaagctttaaggctttatcctcctataccatttgaacacaagtgtgcaattaaatcag |
12963896 |
T |
 |
Q |
214 |
atacactacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
12963897 |
atatattacctagtggagaccatgttagtccaaatacaaagttgatatattctttgtatgcaatgggaaggatggaacaaatatgggg |
12963984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 308
Target Start/End: Original strand, 13244350 - 13244637
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactgtttaacaaaagaggataattcgatcacaaatttcagtgtgaaagagc |
120 |
Q |
|
|
|||||||||||||||| ||||| |||||||||||||||||||| | ||| ||| ||||| ||||||| |||| |||| ||||| | ||| || || |
|
|
T |
13244350 |
tcaactcatcctattggggaagcgaaaattattcaagagatcaaagataattgtctaacacaagaggagaatttaatcaataatttaaacgtggaaaaga |
13244449 |
T |
 |
Q |
121 |
ttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacact |
220 |
Q |
|
|
|||||||||| ||||||||||||||||| |||| |||| |||| ||||| ||||| ||| | ||||| | |||||||| || | || || |||| ||| |
|
|
T |
13244450 |
ttgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctatatcctcctctggcatttcagcacaagtgcgctatcaaatctgatatact |
13244549 |
T |
 |
Q |
221 |
acctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatggggtgatgat |
308 |
Q |
|
|
|||||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
T |
13244550 |
acctagtggagaacatgttggtccaaatacaaagttgatatattctttgtatgcaatgggaaggatgcaacaaatatggggagatgat |
13244637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 39 - 302
Target Start/End: Complemental strand, 13086452 - 13086189
Alignment:
Q |
39 |
gaagcaaaaattattcaagagatcaaggttaactgtttaacaaaagaggataattcgatcacaaatttcagtgtgaaagagcttgataagctagtttacc |
138 |
Q |
|
|
||||| ||||| ||||||||||| || | ||| ||| || || | |||||||||| | |||| ||||| || || || ||||| |||| ||||| |||| |
|
|
T |
13086452 |
gaagctaaaataattcaagagataaaagataattgtctatcacatgaggataatttggtcactaatttaagagttgaaaagcttaataaactagtgtacc |
13086353 |
T |
 |
Q |
139 |
ttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacactacctagtggagaccatgt |
238 |
Q |
|
|
||||||||||||||| |||||| || ||||||||||| |||||||||||| | |||||||||||| | || | |||| ||||||||||||||| |||| |
|
|
T |
13086352 |
ttcatggagctatatgtgaagcattgaggctttatcctcctgtaccatttcagcacaagtgtgcaatcaaagctgatatactacctagtggagattatgt |
13086253 |
T |
 |
Q |
239 |
tagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatggggt |
302 |
Q |
|
|
|| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
13086252 |
taaaccaaatactaagttaatatactctttgtatgcaatgggaaggatgaaacaaatatggggt |
13086189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 13204723 - 13204542
Alignment:
Q |
120 |
cttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacac |
219 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| ||||||||| || |||||||| |||||||| ||||| || | |||||| | || ||||||| || |
|
|
T |
13204723 |
cttgataagctagtgtaccttcatggagctatatgtgaagccttgagactttatcctcctgtaccttttgagcatatatgtgcaatcaaatccgatatac |
13204624 |
T |
 |
Q |
220 |
tacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||||||||||||| | ||||||||||||||||| |||| | ||||||||||| || |||||||||||||||||||||||||| |
|
|
T |
13204623 |
tacctagtggagagcgtgttagtccaaatacaaggttattgtactctttgtacgctatgggaaggatggaacaaatatgggg |
13204542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 13007464 - 13007283
Alignment:
Q |
120 |
cttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacac |
219 |
Q |
|
|
|||||||||||||| ||||| ||||||||| ||| ||||||| | ||||||||||| |||||||| ||||| || | |||||| | |||||||||| || |
|
|
T |
13007464 |
cttgataagctagtgtacctccatggagctctatgtgaagccatgaggctttatcctcctgtaccttttgagcatatctgtgcaatcaattccgatatac |
13007365 |
T |
 |
Q |
220 |
tacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||||||||||||| | ||||||||||||||||| |||| | ||||||||||| || |||||||||||||||||||||||||| |
|
|
T |
13007364 |
tacctagtggagagcgtgttagtccaaatacaaggttattgtactctttgtacgctatgggaaggatggaacaaatatgggg |
13007283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 13094663 - 13094482
Alignment:
Q |
120 |
cttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacac |
219 |
Q |
|
|
|||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||| |||||||| ||||| || | |||||| | || || |||| || |
|
|
T |
13094663 |
cttgataagctagtatacctccatggagctatatgtgaaaccttaaggctttatcctcctgtaccttttgagcatatctgtgcaatcaaatctgatatac |
13094564 |
T |
 |
Q |
220 |
tacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||||||||||| ||||||||| ||||||||||| ||||| |||||||||||| | |||||||||||||||||||||||||| |
|
|
T |
13094563 |
tacctagtggataccatgttactccaaatacaactttaatttactctttgtattctatgggaaggatggaacaaatatgggg |
13094482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 301
Target Start/End: Original strand, 13070104 - 13070285
Alignment:
Q |
120 |
cttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacac |
219 |
Q |
|
|
|||||||| ||||| ||||||||||||||||||| |||| |||| || |||||||| |||||||| ||||| || | |||||| | || ||||||| || |
|
|
T |
13070104 |
cttgataatctagtgtaccttcatggagctatatgtgaaaccttgagactttatcctcctgtaccttttgagcatatatgtgcaatcaaatccgatatac |
13070203 |
T |
 |
Q |
220 |
tacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||||||||||||| | ||||||||||||||||| |||| | ||||||||||| || |||||||||||||||||||||||||| |
|
|
T |
13070204 |
tacctagtggagagcgtgttagtccaaatacaaggttattgtactctttgtacgctatgggaaggatggaacaaatatgggg |
13070285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 13130188 - 13129911
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactgtttaacaaaagaggataattcgatcacaaatttcag---tgtgaaag |
117 |
Q |
|
|
|||||| |||||||||| |||| |||||| |||||||||||||| | ||| || |||||| |||||| |||| ||| || ||| || |||| | |
|
|
T |
13130188 |
tcaacttatcctattgtggaagaaaaaatcattcaagagatcaaagataattggttaacacaagagggtaatcggattac---tttgaggcatgtg---g |
13130095 |
T |
 |
Q |
118 |
agcttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatac |
217 |
Q |
|
|
| |||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||| ||| |||| ||||| || | ||| || | || || |||| |
|
|
T |
13130094 |
atcttgataagctagtatacctccatggagctatatgtgaaaccttaaggctttatcctcctataccttttgagcatatctgttcaatcaaatctgatat |
13129995 |
T |
 |
Q |
218 |
actacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||||||||||||| ||||||||||||||||||||| || || |||||||||||| | |||||||||||||||||||||||||| |
|
|
T |
13129994 |
actacctagtggataccatgttagtccaaatacaactttgatttactctttgtattctatgggaaggatggaacaaatatgggg |
13129911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 13101264 - 13101083
Alignment:
Q |
120 |
cttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacac |
219 |
Q |
|
|
|||||||||||||| ||||| ||||||||||||| |||| |||| ||||||||||| |||||||| ||||| || | ||| || | || ||||||| || |
|
|
T |
13101264 |
cttgataagctagtgtacctccatggagctatatgtgaaaccttgaggctttatcctcctgtaccttttgagcatatatgttcaatcaaatccgatatac |
13101165 |
T |
 |
Q |
220 |
tacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
| ||||||||||| | | ||||||||||||||| |||| | ||||||||||| || |||||||||||||||||||||||||| |
|
|
T |
13101164 |
ttcctagtggagagcgttttagtccaaatacaaggttattgtactctttgtacgctatgggaaggatggaacaaatatgggg |
13101083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 13161785 - 13161604
Alignment:
Q |
120 |
cttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacac |
219 |
Q |
|
|
|||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||| |||| ||||| || | |||||| | || ||||||| || |
|
|
T |
13161785 |
cttgataagctagtatacctccatggagctatatgtgaaaccttaaggctttatccacctataccttttgagcatatctgtgcaatcaaatccgatatac |
13161686 |
T |
 |
Q |
220 |
tacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||||||||||||| | | ||||||||||||||| ||||| |||||| ||||| | ||||| |||||||||||| ||||||| |
|
|
T |
13161685 |
tacctagtggagaacgtattagtccaaatacaagtttaatgtactctatgtattctatgggcaggatggaacaactatgggg |
13161604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 301
Target Start/End: Original strand, 30367940 - 30368217
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactgtttaacaaaagaggataattcgatcacaaatttcagtg-tgaaagag |
119 |
Q |
|
|
||||||||||||||||| ||||| |||||||||||||||||||| | ||| ||| || ||||| | || |||| ||| || |||| || || || |
|
|
T |
30367940 |
tcaactcatcctattgtggaagccaaaattattcaagagatcaaagataattgtgtatcaaaacatgagaattggataac----ttcaatggtggaaagc |
30368035 |
T |
 |
Q |
120 |
cttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatacac |
219 |
Q |
|
|
|||||||||||||| ||||| ||||||||||||| |||| || | ||| | ||||| ||||||| ||||| | | ||||| | || || |||| || |
|
|
T |
30368036 |
cttgataagctagtctacctccatggagctatatgtgaatccatgaggttgtatcctactgtaccttttgagcttatcagtgcaatcaaatctgatatac |
30368135 |
T |
 |
Q |
220 |
tacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||| |
|
|
T |
30368136 |
tacctagtggagagaatgttagtccaaataccaagttaatttactctttgtatgctatgggaaggatggaaaaaatatgggg |
30368217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 118 - 301
Target Start/End: Original strand, 13065139 - 13065322
Alignment:
Q |
118 |
agcttgataagctagtttaccttcatggagctatatttgaagccttaaggctttatccacctgtaccatttgaacacaagtgtgcagttaattccgatac |
217 |
Q |
|
|
|||||||||| ||| ||||||| || |||||||||| ||||||||||||||||||||| |||||||| | || || |||| |||| | || | |||| |
|
|
T |
13065139 |
agcttgataaactaatttacctccacggagctatatgtgaagccttaaggctttatcctcctgtacctatcgagcaaaagtttgcaatcaaagctgatat |
13065238 |
T |
 |
Q |
218 |
actacctagtggagaccatgttagtccaaatacaaagttaatatactctttgtatgcaatgggaaggatggaacaaatatgggg |
301 |
Q |
|
|
||| |||||||||| |||||| ||||||||||||| | || |||||| ||||||| |||||||||||||||| |||||||||| |
|
|
T |
13065239 |
acttcctagtggagtccatgtaagtccaaatacaaggatattatactatttgtattcaatgggaaggatggagaaaatatgggg |
13065322 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 19727510 - 19727461
Alignment:
Q |
24 |
actcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactg |
73 |
Q |
|
|
|||||||||||||||||||| |||||||||||||| ||||| | |||||| |
|
|
T |
19727510 |
actcatcctattgtcgaagccaaaattattcaagaaatcaaagataactg |
19727461 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 13007560 - 13007508
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactg |
73 |
Q |
|
|
||||||||||||||||| ||||| |||||||||||||| ||||| | |||||| |
|
|
T |
13007560 |
tcaactcatcctattgtggaagccaaaattattcaagaaatcaaagataactg |
13007508 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 13161881 - 13161810
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaagagatcaaggttaactgtttaacaaaagaggataat |
92 |
Q |
|
|
|||||| |||||||||| |||| |||||| |||||||||||||| | ||| || ||||| ||||||||||| |
|
|
T |
13161881 |
tcaacttatcctattgtggaagaaaaaatcattcaagagatcaaagataattggctaacacaagaggataat |
13161810 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 13070008 - 13070045
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaaga |
58 |
Q |
|
|
||||||||||||||||| ||||| |||||||||||||| |
|
|
T |
13070008 |
tcaactcatcctattgtggaagccaaaattattcaaga |
13070045 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 12963740 - 12963780
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaagagat |
61 |
Q |
|
|
||||||||||||||||| ||| | ||||||||||||||||| |
|
|
T |
12963740 |
tcaactcatcctattgtggaaactaaaattattcaagagat |
12963780 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 36668368 - 36668331
Alignment:
Q |
141 |
catggagctatatttgaagccttaaggctttatccacc |
178 |
Q |
|
|
||||||||| ||| |||||||||||||||||||||||| |
|
|
T |
36668368 |
catggagctttatgtgaagccttaaggctttatccacc |
36668331 |
T |
 |
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Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 31396508 - 31396548
Alignment:
Q |
21 |
tcaactcatcctattgtcgaagcaaaaattattcaagagat |
61 |
Q |
|
|
||||||||||||| ||| ||||| ||||||||||||||||| |
|
|
T |
31396508 |
tcaactcatcctaatgtggaagccaaaattattcaagagat |
31396548 |
T |
 |
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