View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4380-Insertion-5 (Length: 420)

Name: NF4380-Insertion-5
Description: NF4380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4380-Insertion-5
NF4380-Insertion-5
[»] chr1 (31 HSPs)
chr1 (31-340)||(1932062-1932382)
chr1 (38-332)||(1938327-1938619)
chr1 (31-308)||(1949057-1949344)
chr1 (361-405)||(8712046-8712090)
chr1 (361-413)||(8878831-8878883)
chr1 (361-413)||(29361404-29361456)
chr1 (361-413)||(29672372-29672424)
chr1 (361-413)||(31787138-31787190)
chr1 (361-405)||(47393550-47393594)
chr1 (378-420)||(1932383-1932425)
chr1 (361-419)||(10977830-10977888)
chr1 (361-419)||(31023744-31023802)
chr1 (361-407)||(39674086-39674132)
chr1 (375-420)||(1938661-1938706)
chr1 (361-405)||(4227815-4227859)
chr1 (361-405)||(4750368-4750412)
chr1 (361-405)||(8462449-8462493)
chr1 (361-413)||(12959457-12959509)
chr1 (361-405)||(15170233-15170277)
chr1 (361-405)||(16705363-16705407)
chr1 (361-405)||(24583898-24583942)
chr1 (361-405)||(24589567-24589611)
chr1 (361-405)||(32557966-32558010)
chr1 (361-413)||(35691667-35691719)
chr1 (361-405)||(39282601-39282645)
chr1 (361-405)||(40100554-40100598)
chr1 (361-405)||(41529178-41529222)
chr1 (361-405)||(42334426-42334470)
chr1 (361-405)||(44343812-44343856)
chr1 (361-413)||(45430074-45430126)
chr1 (361-405)||(46160407-46160451)
[»] chr2 (23 HSPs)
chr2 (361-403)||(10197989-10198031)
chr2 (361-413)||(5005183-5005235)
chr2 (361-420)||(22061048-22061107)
chr2 (361-413)||(1684297-1684349)
chr2 (361-413)||(29513437-29513489)
chr2 (361-413)||(36443582-36443634)
chr2 (361-417)||(39293415-39293471)
chr2 (361-405)||(40833537-40833581)
chr2 (361-419)||(21134561-21134619)
chr2 (367-413)||(25556919-25556965)
chr2 (361-398)||(8341656-8341693)
chr2 (361-398)||(25899069-25899106)
chr2 (361-405)||(1221207-1221251)
chr2 (361-413)||(12192475-12192527)
chr2 (361-405)||(14527818-14527862)
chr2 (361-405)||(19002974-19003018)
chr2 (361-405)||(19275110-19275154)
chr2 (361-405)||(26849991-26850035)
chr2 (361-405)||(39927659-39927703)
chr2 (361-413)||(40171960-40172012)
chr2 (361-413)||(41186851-41186903)
chr2 (361-405)||(41787054-41787098)
chr2 (361-405)||(43446602-43446646)
[»] chr7 (25 HSPs)
chr7 (361-413)||(32267689-32267741)
chr7 (361-413)||(2849931-2849983)
chr7 (361-413)||(39938666-39938718)
chr7 (361-418)||(5114016-5114073)
chr7 (360-405)||(22918241-22918286)
chr7 (360-405)||(25428247-25428292)
chr7 (361-413)||(584536-584588)
chr7 (361-405)||(3945200-3945244)
chr7 (361-405)||(10316618-10316662)
chr7 (361-405)||(10657150-10657194)
chr7 (361-405)||(18976008-18976052)
chr7 (361-413)||(22369573-22369625)
chr7 (361-405)||(22624383-22624427)
chr7 (361-405)||(27119016-27119060)
chr7 (361-405)||(32827788-32827832)
chr7 (361-405)||(33938383-33938427)
chr7 (361-405)||(36669696-36669740)
chr7 (361-405)||(37115801-37115845)
chr7 (361-405)||(39199115-39199159)
chr7 (361-405)||(43073899-43073943)
chr7 (361-413)||(43468434-43468486)
chr7 (361-405)||(43884294-43884338)
chr7 (361-405)||(44481055-44481099)
chr7 (361-405)||(46373171-46373215)
chr7 (361-405)||(46774178-46774222)
[»] chr4 (28 HSPs)
chr4 (361-413)||(29832226-29832278)
chr4 (361-419)||(51779602-51779660)
chr4 (361-405)||(25771146-25771190)
chr4 (361-405)||(42507704-42507748)
chr4 (361-404)||(7258078-7258121)
chr4 (361-405)||(2401293-2401337)
chr4 (361-405)||(2409811-2409855)
chr4 (361-405)||(5388227-5388271)
chr4 (361-405)||(6920672-6920716)
chr4 (366-398)||(9033593-9033625)
chr4 (361-405)||(11248916-11248960)
chr4 (361-405)||(17609146-17609190)
chr4 (361-405)||(19806995-19807039)
chr4 (361-405)||(20180436-20180480)
chr4 (361-413)||(20788296-20788348)
chr4 (361-413)||(23237069-23237121)
chr4 (361-405)||(25367412-25367456)
chr4 (361-405)||(32402748-32402792)
chr4 (361-405)||(33501390-33501434)
chr4 (361-405)||(36878609-36878653)
chr4 (361-405)||(37912516-37912560)
chr4 (361-413)||(42133720-42133772)
chr4 (361-405)||(43050234-43050278)
chr4 (361-405)||(43566065-43566109)
chr4 (361-405)||(51487715-51487759)
chr4 (361-405)||(52920752-52920796)
chr4 (361-405)||(55968610-55968654)
chr4 (361-405)||(55984282-55984326)
[»] chr3 (16 HSPs)
chr3 (361-413)||(49818347-49818399)
chr3 (361-405)||(52262293-52262337)
chr3 (361-405)||(28686331-28686375)
chr3 (361-413)||(29227331-29227383)
chr3 (361-420)||(54080264-54080323)
chr3 (363-413)||(23782136-23782186)
chr3 (361-405)||(3835319-3835363)
chr3 (361-405)||(10659269-10659313)
chr3 (361-413)||(33593112-33593164)
chr3 (361-413)||(33600243-33600295)
chr3 (361-405)||(33610259-33610303)
chr3 (361-405)||(46195796-46195840)
chr3 (361-405)||(47142270-47142314)
chr3 (361-413)||(52679748-52679800)
chr3 (361-405)||(54103917-54103961)
chr3 (361-413)||(54747868-54747920)
[»] chr5 (16 HSPs)
chr5 (361-398)||(29000891-29000928)
chr5 (361-413)||(4456462-4456514)
chr5 (361-413)||(13987615-13987667)
chr5 (361-413)||(27366394-27366446)
chr5 (361-419)||(37881585-37881643)
chr5 (361-405)||(12659076-12659120)
chr5 (361-413)||(15268434-15268486)
chr5 (361-405)||(23991780-23991824)
chr5 (361-405)||(25538109-25538153)
chr5 (361-413)||(28024631-28024683)
chr5 (361-405)||(34163191-34163235)
chr5 (361-405)||(34606964-34607008)
chr5 (361-405)||(35288184-35288228)
chr5 (361-405)||(36347375-36347419)
chr5 (361-405)||(39729729-39729773)
chr5 (361-405)||(40915582-40915626)
[»] chr8 (22 HSPs)
chr8 (361-413)||(9470876-9470928)
chr8 (361-413)||(9724653-9724705)
chr8 (361-413)||(18203179-18203231)
chr8 (361-405)||(18673437-18673481)
chr8 (361-413)||(19715296-19715348)
chr8 (361-413)||(29867326-29867378)
chr8 (360-405)||(600219-600264)
chr8 (361-405)||(7884457-7884501)
chr8 (361-413)||(16872520-16872572)
chr8 (361-413)||(17911026-17911078)
chr8 (361-405)||(21545324-21545368)
chr8 (361-405)||(22578274-22578318)
chr8 (361-405)||(23606252-23606296)
chr8 (361-405)||(26393988-26394032)
chr8 (361-413)||(26804985-26805037)
chr8 (361-405)||(28074430-28074474)
chr8 (361-405)||(29342775-29342819)
chr8 (361-405)||(31602882-31602926)
chr8 (361-413)||(34356583-34356635)
chr8 (361-405)||(37965005-37965049)
chr8 (361-405)||(42192394-42192438)
chr8 (361-413)||(44052941-44052993)
[»] chr6 (25 HSPs)
chr6 (361-413)||(1352540-1352592)
chr6 (361-405)||(5489651-5489695)
chr6 (361-405)||(10364638-10364682)
chr6 (361-413)||(11000437-11000489)
chr6 (361-413)||(14304415-14304467)
chr6 (361-413)||(29344045-29344097)
chr6 (361-420)||(2603549-2603608)
chr6 (363-413)||(26409118-26409168)
chr6 (361-398)||(11213560-11213597)
chr6 (360-405)||(19098587-19098632)
chr6 (361-405)||(3787161-3787205)
chr6 (361-405)||(3888631-3888675)
chr6 (361-405)||(6791942-6791986)
chr6 (361-405)||(6833815-6833859)
chr6 (361-405)||(7896939-7896983)
chr6 (361-405)||(10629485-10629529)
chr6 (361-413)||(12058638-12058690)
chr6 (361-405)||(15989757-15989801)
chr6 (361-405)||(20605638-20605682)
chr6 (361-413)||(29455420-29455472)
chr6 (361-413)||(29818252-29818304)
chr6 (361-413)||(31492949-31493001)
chr6 (361-413)||(31498338-31498390)
chr6 (361-405)||(32609861-32609905)
chr6 (365-413)||(35030418-35030466)
[»] scaffold0768 (1 HSPs)
scaffold0768 (361-405)||(6069-6113)
[»] scaffold0427 (1 HSPs)
scaffold0427 (361-405)||(5300-5344)
[»] scaffold0239 (1 HSPs)
scaffold0239 (361-413)||(15891-15943)
[»] scaffold0037 (1 HSPs)
scaffold0037 (361-405)||(98931-98975)


Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 31 - 340
Target Start/End: Original strand, 1932062 - 1932382
Alignment:
Q  31 gttaatgattagaagtcgttactttttaattaactttacatcctctctaaatgctttcttgaattcctaaattaattcatccatgaaataattatgttgt 130  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1932062 gttaatgattagaaatcattactttttaattaactttacatcctctctaaatgctttcttgaattcctaaattaattcatccatgaaataattatgttgt 1932161  T
Q  131 tataaacaa--------taatgtggtattgattaataaagannnnnnnnnaaatgattcattttttcaaaacgaaaattgaaagtgcgaagacatcatta 222  Q
    |||||| ||        |||||  |||||||||||||||||         |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  1932162 tataaaaaaataaaaaataatgctgtattgattaataaagatttttttt-aaatgattcatttttttaaaacgaaaattgaaagtccgaagacatcatta 1932260  T
Q  223 tgactaactgacatctcaactatgccaacac----cccaaccaaccaaccaaagaccatttacaattgcgaaaataatattatctccgtctcaaattata 318  Q
    |||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  1932261 tgactaactgacatctcaactatgccaacactccaaccaaccaaccaaccaaagaccatttacaattgcgaaaataatattatttcggtctcaaattata 1932360  T
Q  319 agctgttttagtaataccaatg 340  Q
    ||||||||||||||||||||||    
T  1932361 agctgttttagtaataccaatg 1932382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 38 - 332
Target Start/End: Original strand, 1938327 - 1938619
Alignment:
Q  38 attagaagtcgttactttttaattaactttacatcctctctaaatgctttcttgaattcctaaattaattcatccatgaaataattatgttgttataaac 137  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||     
T  1938327 attagaattcattactttttaagtaactttacatcctctctaaatgctttcttgaattactaaattaattcatccatgaaataagtattttgttataaaa 1938426  T
Q  138 aa-taatgtggtattgattaataaagannnnnnnnnaaatgattcattttttcaaaacgaaaattgaaagtgcgaagacatcattatgactaactgacat 236  Q
    || |||||| |||||||||||||||||         ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  1938427 aaataatgttgtattgattaataaagatttttttt-aaatgattcattttttcaaaatgaaaattgaaagtgcaaagacatcattatgactaactcacat 1938525  T
Q  237 ctcaactatgccaacaccccaaccaaccaaccaaagaccatttacaattgcgaaaataatattatctccgtctcaaattataagctgttttagtaa 332  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||||| ||||   ||||| |||  || ||||||||||||  ||||||||||    
T  1938526 ctcaactatgtcaacaccccaaccaaccaaccaaccaccatttacaattgtgaaa--tatattttctttgtttcaaattataagtcgttttagtaa 1938619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 31 - 308
Target Start/End: Original strand, 1949057 - 1949344
Alignment:
Q  31 gttaatgattagaagtcgttactttttaattaactttacatcctctctaaatgctttcttgaattcctaaattaattcatccatgaaataattatgttgt 130  Q
    |||||| |||| || || ||| ||||||| |||||||||||||||||||||||||||||| ||||||||| || |||||| ||| |||||||||||||||    
T  1949057 gttaatcattataattcattattttttaactaactttacatcctctctaaatgctttcttcaattcctaatttgattcatgcataaaataattatgttgt 1949156  T
Q  131 tat--aaacaataatgtggtattgattaataa----agannnnnnnnnaaatgattcattttt-tcaaaacgaaaattgaaagtgcgaagacatcattat 223  Q
    |||  ||| ||||||||||||||||||| |||    ||          || | |||||||||| ||||||| ||||||| |||||| |||||||||||||    
T  1949157 tataaaaaaaataatgtggtattgattactaaaaagagctgtttttttaattcattcatttttctcaaaacaaaaattggaagtgcaaagacatcattat 1949256  T
Q  224 gactaactgacatctcaactatgccaacacc---ccaaccaaccaaccaaagaccatttacaattgcgaaaataatattatctccgtc 308  Q
    ||| |||| ||||| ||||||||||  | ||   ||||||||||||||||  |||||||||||||||  ||||||||| |||||||||    
T  1949257 gaccaactaacatcccaactatgccggcccccaaccaaccaaccaaccaacaaccatttacaattgcttaaataatatcatctccgtc 1949344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 8712090 - 8712046
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  8712090 aataccaatgaaacattaatgttactttttctattatatccttaa 8712046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 8878831 - 8878883
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||| ||||| ||||| ||||||||||||||||||||| |||||||| |||||    
T  8878831 aatatcaatgcaacattaatgttactttttctattataaccttaattatttat 8878883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 29361456 - 29361404
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  29361456 aataccaatgaaacattaatgttacttttcctattatatccttaattatttat 29361404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 29672372 - 29672424
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  29672372 aataccaatgaaacattaatgttacttttcctattatatccttaattatttat 29672424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 31787138 - 31787190
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  31787138 aataccaatgcaacattaatgttacttttcctattataaccttaattatttat 31787190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 47393594 - 47393550
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  47393594 aataccaatgaaacattaatgttactttttctattatatccttaa 47393550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 1932383 - 1932425
Alignment:
Q  378 aatgttactttttctattatacccttaattttttatcattctt 420  Q
    |||||||||| |||||||||||||||||| |||||| ||||||    
T  1932383 aatgttacttcttctattatacccttaatattttattattctt 1932425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 10977888 - 10977830
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattct 419  Q
    |||||||||| || || |||||||||||| ||||||||||||||| | ||||| |||||    
T  10977888 aataccaatgaaaaattaatgttacttttcctattatacccttaactatttattattct 10977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 31023802 - 31023744
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattct 419  Q
    |||| ||||| ||||| |||||||| ||||||||||||||||||| | ||||| |||||    
T  31023802 aatatcaatgaaacattaatgttacattttctattatacccttaactatttattattct 31023744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 407
Target Start/End: Original strand, 39674086 - 39674132
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaatt 407  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||||    
T  39674086 aataccaatgcaacattaatgttacttttcctattataaccttaatt 39674132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 420
Target Start/End: Original strand, 1938661 - 1938706
Alignment:
Q  375 atcaatgttactttttctattatacccttaattttttatcattctt 420  Q
    ||||||||||||||| ||||||||||||||| | ||||| ||||||    
T  1938661 atcaatgttacttttcctattatacccttaactgtttattattctt 1938706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 4227815 - 4227859
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  4227815 aataccaatgaaacattaatgttacttttcctattatatccttaa 4227859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 4750412 - 4750368
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  4750412 aataccaatgaaacattaatgttacttttcctattataaccttaa 4750368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 8462493 - 8462449
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  8462493 aataccaatgaaacattaatgttattttttctattatatccttaa 8462449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 12959509 - 12959457
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||  ||||| |||||||||||| |||||||| |||||||| |||||    
T  12959509 aataccaatacaacattaatgttacttttcctattataaccttaattatttat 12959457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 15170277 - 15170233
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  15170277 aataccaatgaaatattaatgttactttttctattatatccttaa 15170233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 16705363 - 16705407
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  16705363 aataccaatgaaacattaatgttacttttactattatatccttaa 16705407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 24583898 - 24583942
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  24583898 aataccaatgaaacattaatgttacttttcctattatatccttaa 24583942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 24589567 - 24589611
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  24589567 aataccaatgaaacattaatgttacttttcctattatatccttaa 24589611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 32557966 - 32558010
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  32557966 aataccaatgaaacattaatgttacttttcctattatatccttaa 32558010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 35691719 - 35691667
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||  ||||| ||| ||||||||| |||||||||||||||| |||||    
T  35691719 aataccaataaaacattaattttactttttatattatacccttaattatttat 35691667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 39282601 - 39282645
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  39282601 aataccaatgaaacattaatgttacttttcctattatatccttaa 39282645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 40100554 - 40100598
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  40100554 aataccaatgaaatattaatgttactttttctattatatccttaa 40100598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 41529178 - 41529222
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  41529178 aataccaatgaaacattaatgttattttttctattatatccttaa 41529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 42334470 - 42334426
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  42334470 aataccaatgaaacattaatgttattttttctattatatccttaa 42334426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 44343856 - 44343812
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  44343856 aataccaatgaaacattaatgttacttttcctattatatccttaa 44343812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 45430074 - 45430126
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||||||||| || ||||| || |||||    
T  45430074 aataccaatgcaacattaatgttactttttctattgtatccttagttatttat 45430126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 46160407 - 46160451
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  46160407 aataccaatgaaacattaatgttacttttcctattatatccttaa 46160451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 361 - 403
Target Start/End: Complemental strand, 10198031 - 10197989
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattataccctt 403  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  10198031 aataccaatgaaacatcaatgttactttttctattataccctt 10197989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 5005235 - 5005183
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||| |||||    
T  5005235 aataccaatgcaacattaatgttactttttctattataaccttaattatttat 5005183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 22061048 - 22061107
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattctt 420  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| ||||| ||||||    
T  22061048 aataccaatgaaacattaatgttacttttcctattatatccttaattatttattattctt 22061107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 1684349 - 1684297
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||||||||||||||||| | |||||| |||||    
T  1684349 aataccaatgaaacattaatgttactttttctattatatctttaattatttat 1684297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 29513437 - 29513489
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||| |||||||||||||||| |||||||| |||||    
T  29513437 aataccaatgcaacattaatgatactttttctattataaccttaattatttat 29513489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 36443582 - 36443634
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||| ||||||||||||| |||||||| |||||    
T  36443582 aataccaatgaaacattaatgttattttttctattatatccttaattatttat 36443634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 417
Target Start/End: Original strand, 39293415 - 39293471
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcatt 417  Q
    |||||||||| ||||| ||||||| ||||||||||||| |||||| | |||||||||    
T  39293415 aataccaatgaaacattaatgttattttttctattatatccttaactatttatcatt 39293471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 40833537 - 40833581
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  40833537 aataccaatgaaacattaatgttactttttctattatatccttaa 40833581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 21134619 - 21134561
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattct 419  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||| | ||||| |||||    
T  21134619 aataccaatgcaacattaatgttacttttcctattataaccttaactatttattattct 21134561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 413
Target Start/End: Original strand, 25556919 - 25556965
Alignment:
Q  367 aatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||| ||||| ||||||||||||||||||||| |||||||| |||||    
T  25556919 aatgcaacattaatgttactttttctattataaccttaattatttat 25556965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 8341693 - 8341656
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattata 398  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  8341693 aataccaatgaaacattaatgttactttttctattata 8341656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 398
Target Start/End: Original strand, 25899069 - 25899106
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattata 398  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  25899069 aataccaatgaaacattaatgttactttttctattata 25899106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 1221251 - 1221207
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  1221251 aataccaatgaaacattaatgttacttttcctattataaccttaa 1221207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 12192475 - 12192527
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| || || |||||||||||| |||||||| |||||||| |||||    
T  12192475 aataccaatgaaatattaatgttacttttcctattatatccttaattatttat 12192527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 14527818 - 14527862
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  14527818 aataccaatgaaacattaatgttacttttcctattatatccttaa 14527862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 19002974 - 19003018
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  19002974 aataccaatgaaacattaatgttacttttcctattatatccttaa 19003018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 19275154 - 19275110
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  19275154 aataccaatgaaacattaatgttacttttcctattatatccttaa 19275110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 26850035 - 26849991
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  26850035 aataccaatgaaacattaatgttacttttcctattatatccttaa 26849991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 39927703 - 39927659
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  39927703 aataccaatgaaacattaatgttacttttcctattataaccttaa 39927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 40171960 - 40172012
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    ||||||||||  |||| ||||||||||||||||||||| | |||||| |||||    
T  40171960 aataccaatgacacattaatgttactttttctattatatctttaattatttat 40172012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 41186851 - 41186903
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| || || |||||||||||| |||||||| |||||||| |||||    
T  41186851 aataccaatgaaaaattaatgttacttttcctattatatccttaattatttat 41186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 41787098 - 41787054
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  41787098 aataccaatgcaacattaatgttacttttcctattataaccttaa 41787054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 43446602 - 43446646
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  43446602 aataccaatgaaatattaatgttactttttctattatatccttaa 43446646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 32267741 - 32267689
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||| |||||    
T  32267741 aataccaatgcaacattaatgttactttttctattataaccttaattatttat 32267689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 2849983 - 2849931
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||||||||||||  ||||||| |||||    
T  2849983 aataccaatgcaacattaatgttactttttctattataatcttaattatttat 2849931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 39938666 - 39938718
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||| || |||||    
T  39938666 aataccaatgtaacattaatgttactttttctattataaccttagttatttat 39938718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 418
Target Start/End: Complemental strand, 5114073 - 5114016
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattc 418  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||| | ||||| ||||    
T  5114073 aataccaatgaaacattaatgttacttttcctattatatccttaactatttattattc 5114016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 22918241 - 22918286
Alignment:
Q  360 taataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    ||||||||||| ||||| |||||||||||| |||||||| ||||||    
T  22918241 taataccaatgaaacattaatgttacttttcctattataaccttaa 22918286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 25428247 - 25428292
Alignment:
Q  360 taataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    ||||||||||| ||||| |||||||||||| |||||||| ||||||    
T  25428247 taataccaatgaaacattaatgttacttttcctattatatccttaa 25428292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 584588 - 584536
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    ||||| |||| ||||| ||| ||||||||||||||||| |||||||| |||||    
T  584588 aatactaatgcaacattaatattactttttctattataaccttaattatttat 584536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 3945200 - 3945244
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  3945200 aataccaatgcaacattaatgttattttttctattataaccttaa 3945244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 10316618 - 10316662
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  10316618 aataccaatgtaacattaatgttacttttcctattataaccttaa 10316662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 10657194 - 10657150
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  10657194 aataccaatgcaacattaatgttacttttcctattataaccttaa 10657150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 18976008 - 18976052
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  18976008 aataccaatgcaacattaatgttacttttcctattataaccttaa 18976052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 22369573 - 22369625
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||||||||| |||||||||||| ||||| || ||||| || |||||    
T  22369573 aataccaatggaacattaatgttacttttcctattgtaaccttagttatttat 22369625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 22624383 - 22624427
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||    
T  22624383 aatatcaatgaaacattaatgttactttttctattatatccttaa 22624427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 27119060 - 27119016
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  27119060 aataccaatgaaacattaatgttacttttcctattatatccttaa 27119016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 32827832 - 32827788
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  32827832 aataccaatgaaacattaatgttacttttcctattatatccttaa 32827788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 33938427 - 33938383
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  33938427 aataccaatgaaaaattaatgttactttttctattatatccttaa 33938383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 36669740 - 36669696
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  36669740 aataccaatgaaatattaatgttactttttctattatatccttaa 36669696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 37115801 - 37115845
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  37115801 aataccaatgaaaaattaatgttactttttctattatatccttaa 37115845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 39199115 - 39199159
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  39199115 aataccaatgaaacattaatgttacttttcctattatatccttaa 39199159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 43073943 - 43073899
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  43073943 aataccaatgcaacattaatgttacttttcctattataaccttaa 43073899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 43468486 - 43468434
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| || || |||||||||||| |||||||| |||||||| |||||    
T  43468486 aataccaatgaaaaattaatgttacttttcctattatatccttaattatttat 43468434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 43884338 - 43884294
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  43884338 aataccaatgaaatattaatgttactttttctattatatccttaa 43884294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 44481055 - 44481099
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  44481055 aataccaatgaaaaattaatgttactttttctattatatccttaa 44481099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 46373215 - 46373171
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  46373215 aataccaatgaaaaattaatgttactttttctattatatccttaa 46373171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 46774178 - 46774222
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  46774178 aataccaatgaaacattaatgttacttttcctattatatccttaa 46774222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 29832278 - 29832226
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||| |||||    
T  29832278 aataccaatgtaacattaatgttactttttctattataaccttaattatttat 29832226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 51779602 - 51779660
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattct 419  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||| | ||||| |||||    
T  51779602 aataccaatgaaacattaatgttactttttctattatatccttaactatttattattct 51779660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 25771190 - 25771146
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||    
T  25771190 aataccaatgaaacatcaatgttacttttcctattatatccttaa 25771146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 42507748 - 42507704
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  42507748 aataccaatgaaacattaatgttactttttctattatatccttaa 42507704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 7258121 - 7258078
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattataccctta 404  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||    
T  7258121 aataccaatgaaacattaatgttactttttctattatatcctta 7258078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 2401293 - 2401337
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  2401293 aataccaatgaaacattaatgttacttttcctattatatccttaa 2401337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 2409811 - 2409855
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  2409811 aataccaatgcaacattaatgttacttttcctattataaccttaa 2409855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 5388227 - 5388271
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  5388227 aataccaatgaaacattaatgttacttttcctattatatccttaa 5388271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 6920672 - 6920716
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  6920672 aataccaatgaaacattaatgttacttttcctattataaccttaa 6920716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 9033593 - 9033625
Alignment:
Q  366 caatggaacatcaatgttactttttctattata 398  Q
    ||||||||||| |||||||||||||||||||||    
T  9033593 caatggaacattaatgttactttttctattata 9033625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 11248960 - 11248916
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  11248960 aataccaatgaaacattaatgttacttttcctattatatccttaa 11248916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 17609190 - 17609146
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  17609190 aataccaatgaaacattaatgttattttttctattatatccttaa 17609146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 19807039 - 19806995
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  19807039 aataccaatgcaacattaatgttacttttcctattataaccttaa 19806995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 20180436 - 20180480
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  20180436 aataccaatgaaaaattaatgttactttttctattatatccttaa 20180480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 20788348 - 20788296
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||| ||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  20788348 aatatcaatgcaacattaatgttacttttcctattataaccttaattatttat 20788296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 23237069 - 23237121
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||| || |||||    
T  23237069 aataccaatgtaacattaatgttacttttcctattataaccttagttatttat 23237121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 25367456 - 25367412
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  25367456 aataccaatgaaacattaatgttacttttcctattataaccttaa 25367412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 32402748 - 32402792
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  32402748 aataccaatgcaacattaatgttacttttcctattataaccttaa 32402792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 33501390 - 33501434
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||    
T  33501390 aatatcaatgaaacattaatgttactttttctattataaccttaa 33501434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 36878653 - 36878609
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||| | ||||||||||||||||||||| ||||||    
T  36878653 aataccaatgcaactttaatgttactttttctattataaccttaa 36878609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 37912516 - 37912560
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  37912516 aataccaatgcaacattaatgttacttttcctattataaccttaa 37912560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 42133772 - 42133720
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| | |||||| |||||||| |||||    
T  42133772 aataccaatgaaacattaatgttacttttcccattatatccttaattatttat 42133720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 43050234 - 43050278
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  43050234 aataccaatgaaatattaatgttactttttctattatatccttaa 43050278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 43566065 - 43566109
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||| | ||||||||||||||||||||| ||||||    
T  43566065 aataccaatgcaactttaatgttactttttctattataaccttaa 43566109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 51487759 - 51487715
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||    
T  51487759 aatatcaatgcaacattaatgttactttttctattataaccttaa 51487715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 52920796 - 52920752
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  52920796 aataccaatgaaacattaatgttacttttcctattatatccttaa 52920752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 55968610 - 55968654
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  55968610 aataccaatgaaacattaatgttacttttcctattatatccttaa 55968654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 55984326 - 55984282
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  55984326 aataccaatgaaacattaatgttacttttcctattatatccttaa 55984282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 49818347 - 49818399
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||| |||||    
T  49818347 aataccaatgcaacattaatgttactttttctattataaccttaattatttat 49818399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 52262293 - 52262337
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  52262293 aataccaatgaaacattaatgttactttttctattatacccttaa 52262337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 28686375 - 28686331
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  28686375 aataccaatgaaacattaatgttactttttctattatatccttaa 28686331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 29227383 - 29227331
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||| ||||| ||||| ||||||||||||||||||||| |||||||| |||||    
T  29227383 aatatcaatgaaacataaatgttactttttctattatatccttaattatttat 29227331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 54080323 - 54080264
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattctt 420  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||| | ||||| ||||||    
T  54080323 aataccaatgaaacattaatgttacttttcctattatatccttaactatttattattctt 54080264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 413
Target Start/End: Original strand, 23782136 - 23782186
Alignment:
Q  363 taccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  23782136 taccaatgaaacattaatgttacttttcctattatatccttaattatttat 23782186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 3835319 - 3835363
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  3835319 aataccaatgaaaaattaatgttactttttctattatatccttaa 3835363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 10659269 - 10659313
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  10659269 aataccaatgaaacattaatgttacttttcctattatatccttaa 10659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 33593164 - 33593112
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| | |||||| |||||    
T  33593164 aataccaatgcaacattaatgttacttttcctattataactttaattatttat 33593112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 33600295 - 33600243
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| | |||||| |||||    
T  33600295 aataccaatgcaacattaatgttacttttcctattataactttaattatttat 33600243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 33610303 - 33610259
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  33610303 aataccaatgcaacattaatgttacttttcctattataaccttaa 33610259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 46195840 - 46195796
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  46195840 aataccaatgaaacattaatgttacttttcctattatatccttaa 46195796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 47142270 - 47142314
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| || |||||||||||||||||| ||||||    
T  47142270 aataccaatgcaacattaacgttactttttctattataaccttaa 47142314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 52679800 - 52679748
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| | |||||| |||||    
T  52679800 aataccaatgaaacattaatgttacttttcctattatatctttaattatttat 52679748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 54103961 - 54103917
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  54103961 aataccaatgaaacattaatgttacttttcctattataaccttaa 54103917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 54747920 - 54747868
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| || || ||||||| ||||||||||||| |||||||| |||||    
T  54747920 aataccaatgaaaaattaatgttattttttctattatatccttaattgtttat 54747868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 29000928 - 29000891
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattata 398  Q
    |||||||||||||||| |||||||||||||||||||||    
T  29000928 aataccaatggaacattaatgttactttttctattata 29000891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 4456462 - 4456514
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  4456462 aataccaatgaaacattaatgttacttttcctattatatccttaattatttat 4456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 13987615 - 13987667
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  13987615 aataccaatgcaacattaatgttacttttcctattataaccttaattatttat 13987667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 27366446 - 27366394
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  27366446 aataccaatgcaacattaatgttacttttcctattataaccttaattatttat 27366394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 37881643 - 37881585
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattct 419  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||| || ||||| |||||    
T  37881643 aataccaatgcaacattaatgttacttttcctattataaccttagttatttattattct 37881585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 12659076 - 12659120
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||||||| |||| ||||||    
T  12659076 aataccaatgcaacattaatgttactttttctaatataaccttaa 12659120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 15268486 - 15268434
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||  ||||||||||||| |||||||| |||||    
T  15268486 aataccaatgaaacattaatgttgttttttctattatatccttaattatttat 15268434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 23991780 - 23991824
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  23991780 aataccaatgcaacattaatgttacttttcctattataaccttaa 23991824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 25538109 - 25538153
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  25538109 aataccaatgtaacattaatgttacttttcctattataaccttaa 25538153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 28024631 - 28024683
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||| |||||||||||||||| | |||||| |||||    
T  28024631 aataccaatgcaacattaatgatactttttctattataactttaattatttat 28024683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 34163191 - 34163235
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  34163191 aataccaatgaaacattaatgttacttttcctattatatccttaa 34163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 34607008 - 34606964
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  34607008 aataccaatgaaacattaatgttacttttcctattatatccttaa 34606964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 35288184 - 35288228
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  35288184 aataccaatgcaacattaatgttacttttcctattataaccttaa 35288228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 36347419 - 36347375
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  36347419 aataccaatgaaacattaatgttacttttcctattatatccttaa 36347375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 39729773 - 39729729
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  39729773 aataccaatgcaacattaatgttacttttcctattataaccttaa 39729729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 40915626 - 40915582
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    ||||| |||| ||||| ||||||||||||||||||||| ||||||    
T  40915626 aatactaatgaaacattaatgttactttttctattatatccttaa 40915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 9470876 - 9470928
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  9470876 aataccaatgcaacattaatgttacttttcctattataaccttaattatttat 9470928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 9724653 - 9724705
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  9724653 aataccaatgcaacattaatgttacttttcctattataaccttaattatttat 9724705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 18203231 - 18203179
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  18203231 aataccaatgaaacattaatgttacttttcctattatatccttaattatttat 18203179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 18673437 - 18673481
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  18673437 aataccaatgaaacattaatgttactttttctattatatccttaa 18673481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 19715296 - 19715348
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  19715296 aataccaatgaaacattaatgttacttttcctattatatccttaattatttat 19715348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 29867326 - 29867378
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  29867326 aataccaatgcaacattaatgttacttttcctattataaccttaattatttat 29867378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 405
Target Start/End: Complemental strand, 600264 - 600219
Alignment:
Q  360 taataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    ||||||||||| || || ||||||||||||||||||||| ||||||    
T  600264 taataccaatgaaatattaatgttactttttctattatatccttaa 600219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 7884501 - 7884457
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  7884501 aataccaatgaaatattaatgttactttttctattatatccttaa 7884457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 16872572 - 16872520
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| || || |||||||||||| |||||||| |||||||| |||||    
T  16872572 aataccaatgaaatattaatgttacttttcctattatatccttaattatttat 16872520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 17911026 - 17911078
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| ||||||| |||||||||||||  ||||||| |||||    
T  17911026 aataccaatgaaacattaatgttaatttttctattatattcttaattatttat 17911078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 21545324 - 21545368
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  21545324 aataccaatgcaacattaatgttacttttcctattataaccttaa 21545368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 22578274 - 22578318
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  22578274 aataccaatgaaacattaatgttacttttcctattatatccttaa 22578318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 23606252 - 23606296
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  23606252 aataccaatgaaaaattaatgttactttttctattatatccttaa 23606296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 26394032 - 26393988
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  26394032 aataccaatgcaacattaatgttacttttcctattataaccttaa 26393988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 26805037 - 26804985
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||| ||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  26805037 aatatcaatgcaacattaatgttacttttcctattataaccttaattatttat 26804985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 28074474 - 28074430
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  28074474 aataccaatgaaacattaatgttacttttcctattataaccttaa 28074430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 29342775 - 29342819
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  29342775 aataccaatgcaacattaatgttacttttcctattataaccttaa 29342819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 31602926 - 31602882
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  31602926 aataccaatgcaacattaatgttacttttcctattataaccttaa 31602882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 34356583 - 34356635
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||  ||||| |||||||||||| |||||||| |||||||| |||||    
T  34356583 aataccaatacaacattaatgttacttttcctattataaccttaattatttat 34356635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 37965049 - 37965005
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    ||||| |||| ||||| ||||||||||||||||||||| ||||||    
T  37965049 aatactaatgaaacattaatgttactttttctattatatccttaa 37965005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 42192438 - 42192394
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  42192438 aataccaatgaaacattaatgttacttttcctattatatccttaa 42192394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 44052941 - 44052993
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||| || |||||    
T  44052941 aatatcaatgtaacattaatgttactttttctattataaccttagttatttat 44052993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 1352540 - 1352592
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  1352540 aataccaatgaaacattaatgttacttttcctattatatccttaattatttat 1352592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 5489651 - 5489695
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  5489651 aataccaatgcaacattaatgttactttttctattataaccttaa 5489695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 10364682 - 10364638
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  10364682 aataccaatgaaacattaatgttactttttctattatatccttaa 10364638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 11000437 - 11000489
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||  ||||||||||||||||||||| |||||||| |||||    
T  11000437 aataccaatgcaacaataatgttactttttctattataaccttaattatttat 11000489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 14304415 - 14304467
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| || || ||||||||||||||||||||| |||||||| |||||    
T  14304415 aataccaatgaaaaattaatgttactttttctattatatccttaattatttat 14304467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 29344045 - 29344097
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  29344045 aataccaatgcaacattaatgttacttttcctattataaccttaattatttat 29344097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 2603608 - 2603549
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttatcattctt 420  Q
    |||||||||| ||||| ||||| ||||||||||||||| |||||| | ||||| ||||||    
T  2603608 aataccaatgaaacattaatgtaactttttctattatatccttaactatttattattctt 2603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 413
Target Start/End: Original strand, 26409118 - 26409168
Alignment:
Q  363 taccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  26409118 taccaatgaaacattaatgttacttttcctattatatccttaattatttat 26409168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 11213597 - 11213560
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattata 398  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  11213597 aataccaatgcaacattaatgttactttttctattata 11213560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 19098587 - 19098632
Alignment:
Q  360 taataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    ||||||||||| || || ||||||||||||||||||||| ||||||    
T  19098587 taataccaatgaaaaattaatgttactttttctattatatccttaa 19098632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 3787161 - 3787205
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  3787161 aataccaatgaaacattaatgttattttttctattatatccttaa 3787205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 3888631 - 3888675
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  3888631 aataccaatgaaacattaatgttacttttcctattatatccttaa 3888675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 6791986 - 6791942
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  6791986 aataccaatgcaacattaatgttacttttcctattataaccttaa 6791942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 6833815 - 6833859
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  6833815 aataccaatgtaacattaatgttacttttcctattataaccttaa 6833859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 7896983 - 7896939
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  7896983 aataccaatgcaacattaatgttacttttcctattataaccttaa 7896939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 10629529 - 10629485
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| || || ||||||||||||||||||||| ||||||    
T  10629529 aataccaatgaaatattaatgttactttttctattatatccttaa 10629485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 12058638 - 12058690
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||  ||||| |||||||||||| |||||||| |||||||| |||||    
T  12058638 aataccaataaaacattaatgttacttttcctattatatccttaattatttat 12058690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 15989801 - 15989757
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  15989801 aataccaatgaaacattaatgttacttttcctattatatccttaa 15989757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 20605638 - 20605682
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  20605638 aataccaatgcaacattaatgttacttttcctattataaccttaa 20605682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 29455420 - 29455472
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| | ||| |||||||||||| |||||||| |||||||| |||||    
T  29455420 aataccaatgcagcattaatgttacttttcctattataaccttaattatttat 29455472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 29818252 - 29818304
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||| ||||| ||||| ||| ||||||||||||||||| |||||||| |||||    
T  29818252 aatatcaatgcaacattaatcttactttttctattataaccttaattatttat 29818304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 31492949 - 31493001
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| || || |||||||||||| |||||||| |||||||| |||||    
T  31492949 aataccaatgaaatattaatgttacttttcctattatatccttaattatttat 31493001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 31498338 - 31498390
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||||||| || || |||||||||||| |||||||| |||||||| |||||    
T  31498338 aataccaatgaaatattaatgttacttttcctattatatccttaattatttat 31498390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 32609861 - 32609905
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  32609861 aataccaatgcaacattaatgttacttttcctattataaccttaa 32609905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 35030418 - 35030466
Alignment:
Q  365 ccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||||| || ||||||||||||||| |||||||||| |||||| |||||    
T  35030418 ccaatgaaatatcaatgttacttttcctattataccattaattatttat 35030466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 6113 - 6069
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  6113 aataccaatgtaacattaatgttacttttcctattataaccttaa 6069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 5300 - 5344
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  5300 aataccaatgaaacattaatgttacttttcctattatatccttaa 5344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 15943 - 15891
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaattttttat 413  Q
    |||| ||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  15943 aatatcaatgcaacattaatgttacttttcctattataaccttaattatttat 15891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 98931 - 98975
Alignment:
Q  361 aataccaatggaacatcaatgttactttttctattatacccttaa 405  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||||    
T  98931 aataccaatgaaacattaatgttacttttcctattatatccttaa 98975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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