View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4381_high_36 (Length: 323)
Name: NF4381_high_36
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4381_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 20 - 244
Target Start/End: Complemental strand, 34062097 - 34061873
Alignment:
| Q |
20 |
attcccacatatccttgatttctggtgagnnnnnnnncttctcaaaaatttcannnnnnnncttcatatttgttgaccctttattccataattgattatg |
119 |
Q |
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| T |
34062097 |
attcccacatatccttgatttctggtgagttttttttcttctcaaaaatttcattttttttcttcatatttgttgaccctttattccataattgattatg |
34061998 |
T |
|
| Q |
120 |
ctgtgatcaattcatcattttcctnnnnnnntctaatttttatttgattttagggattggatttatcattgttgttctgtgtcattcattttgattcatt |
219 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34061997 |
ctgtgatcaattcatcattttcctaaaaaaatctaatttttatttgattttagggattggatttatcattgttgttctgtgtcattcattttgattcatt |
34061898 |
T |
|
| Q |
220 |
ggtgttgaggtaagtttaagcttaa |
244 |
Q |
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||||||||||||||||||||||||| |
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| T |
34061897 |
ggtgttgaggtaagtttaagcttaa |
34061873 |
T |
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