View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4381_high_53 (Length: 272)
Name: NF4381_high_53
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4381_high_53 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 9 - 265
Target Start/End: Original strand, 4592152 - 4592408
Alignment:
| Q |
9 |
acatcatcacttaaattcaataggggaagatcaatcaattattgttgaactgctttgcataaaaaattacttaaatttgattttatttaagcaacacctc |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592152 |
acatcatcacttaaattcaataggggaagatcaatcaattattgttgaactgctttgcataaaaaattacttaaatttgattttatttaagcaacacctc |
4592251 |
T |
|
| Q |
109 |
cttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgcctttttcctcatcttcttt |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592252 |
cttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgttctcctctgccttcttcttcaactcgattgcctttttcctcatcttcttt |
4592351 |
T |
|
| Q |
209 |
cctttctctcccaccatcaattcattgacaagtttctccacctcctccctctttaca |
265 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
4592352 |
cctttctctcccaccatcaattcattgataagtttctccacctcctctctctttaca |
4592408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 265
Target Start/End: Original strand, 4563640 - 4563888
Alignment:
| Q |
17 |
acttaaattcaataggggaagatcaatcaattattgttgaactgctttgcataaaaaa-ttacttaaatttgattttatttaagcaacacctccttgatc |
115 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||||| |||||| ||||||||| |||||||||||| |
|
|
| T |
4563640 |
acttaaattcaataggggaagatcaattaattatcgttgaactgaattgcataaaaaagttacttaaatt-gattttgtttaagcaaaacctccttgatc |
4563738 |
T |
|
| Q |
116 |
aatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgcctttttcctcatcttctttcctttct |
215 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||| ||||||| | |||||| | |||||||||||||| |||||||||| || ||||||||||||||||| |
|
|
| T |
4563739 |
actttgtccaagttcatgtatgaacaacctccagctctcgtgttttcctccactttcttcttcaactcaattgccttttgccgcatcttctttcctttct |
4563838 |
T |
|
| Q |
216 |
ctcccaccatcaattcattgacaagtttctccacctcctccctctttaca |
265 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
4563839 |
ctcctgacatcaattcattgacaagtttctccacctcttctctctttaca |
4563888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 63 - 261
Target Start/End: Original strand, 4585608 - 4585809
Alignment:
| Q |
63 |
ttgcataaaaaatt-acttaaa--tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgct |
159 |
Q |
| |
|
|||||||||||||| ||||| | ||||||||||||||||||| |||||||| |||| ||| |||||||| || |||||||||||||||||||||||| |
|
|
| T |
4585608 |
ttgcataaaaaattcacttataggtttgattttatttaagcaaaacctccttaatcactttttccaagtttatgtatgaacaacctccaggtctcgtgtc |
4585707 |
T |
|
| Q |
160 |
ctcctccgccttcttcttcaactcgattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctc |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||| ||| |
|
|
| T |
4585708 |
ctcctccgccttcttcttcaactcgattgccttttgcctcatcttctttccattctctcccaccatcaattcattgaccaacttctccacctcctctctc |
4585807 |
T |
|
| Q |
260 |
tt |
261 |
Q |
| |
|
|| |
|
|
| T |
4585808 |
tt |
4585809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 79 - 261
Target Start/End: Complemental strand, 4613859 - 4613677
Alignment:
| Q |
79 |
ttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttc |
178 |
Q |
| |
|
|||| ||||||||| ||| |||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |
|
|
| T |
4613859 |
ttaagtttgattttgtttcagcagcacctcattgatcactttgtccaagttcatatatgaacaacctcctggtctcgtgtcctcctctgccttcttcttc |
4613760 |
T |
|
| Q |
179 |
aactcgattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||| |
|
|
| T |
4613759 |
aactcaattgccttttgcctcattttctttcctttctctcccaccatcaattcattgaccagcttctctacctcatctctctt |
4613677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 77 - 261
Target Start/End: Original strand, 4579421 - 4579605
Alignment:
| Q |
77 |
acttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttct |
176 |
Q |
| |
|
|||||| || |||||| ||| || ||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||| |
|
|
| T |
4579421 |
acttaagttcgattttgtttgagtaacacctccttaatcactttctccaagttcatgtatgaacagcctccaggtctcgtgtcctcctccaccttcttct |
4579520 |
T |
|
| Q |
177 |
tcaactcgattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| || || |||||||||||||| ||||| |
|
|
| T |
4579521 |
tcaactcaattgccttttgcctcatcttctttgctttctctcccaccatcaattcattaaccagcttctccacctcctctctctt |
4579605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 84 - 265
Target Start/End: Original strand, 4560502 - 4560683
Alignment:
| Q |
84 |
tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactc |
183 |
Q |
| |
|
||||||||| |||||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||| ||| |
|
|
| T |
4560502 |
tttgattttgtttaagcaacacctccttaatcactttctccaagttcatgtatgaacaacctccaggtctcgtgtacacctccgcctttttcttcagctc |
4560601 |
T |
|
| Q |
184 |
gattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctttaca |
265 |
Q |
| |
|
|| ||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
4560602 |
catggccttttgcctcatcttctttcctttatctcaggacatcaattcattgaccagtttctccacgtcctccctctttaca |
4560683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 86 - 252
Target Start/End: Original strand, 4570970 - 4571136
Alignment:
| Q |
86 |
tgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcga |
185 |
Q |
| |
|
||||||||||||||||| |||||||| |||| ||| ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| ||| | |
|
|
| T |
4570970 |
tgattttatttaagcaaaacctccttaatcactttttccaagttcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcttcttcatctcca |
4571069 |
T |
|
| Q |
186 |
ttgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctc |
252 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
4571070 |
ttatatttttcctcatcttctttcctttatctcccaccatcaattcattgaccaaattctccacctc |
4571136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 85 - 265
Target Start/End: Original strand, 4574305 - 4574485
Alignment:
| Q |
85 |
ttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcg |
184 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| ||| |||||||| | |||||||||||||||||||||||| | ||||| |||||||||||| ||| |
|
|
| T |
4574305 |
ttgattttgtttaagcaacacctccttaatcactttctccaagtttgtgtatgaacaacctccaggtctcgtgtccacctccaccttcttcttcagctca |
4574404 |
T |
|
| Q |
185 |
attgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctttaca |
265 |
Q |
| |
|
|| || |||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4574405 |
atggctttttgcctcatcttctttcctttatctccggacatcaattcattgaccagtttctccacctcctccctctttaca |
4574485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 94 - 265
Target Start/End: Complemental strand, 4504523 - 4504352
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
||||||||| || ||||| |||| ||||||||||||||| ||||||||||| ||| |||| ||| |||||| ||||||||||||||||| || |||||| |
|
|
| T |
4504523 |
tttaagcaagacgtccttaatcactttgtccaagttcatgtatgaacaaccaccaagtcttgtgtcctcctctgccttcttcttcaactccatggccttt |
4504424 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctttaca |
265 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| || |||| |||| |
|
|
| T |
4504423 |
tgcctcatcttctttcctttctctcccaccatcaattcattaataagtttctctacctcttctctctgtaca |
4504352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 88 - 236
Target Start/End: Original strand, 4480693 - 4480841
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| ||||||||| |||||||| |||| ||||||||||||||| ||||||||||| |||||||| ||| |||||| ||| ||||||||||||| || |
|
|
| T |
4480693 |
attttgtttaagcaagacctccttaatcactttgtccaagttcatgtatgaacaaccaccaggtcttgtgtcctcctctgccatcttcttcaactccatg |
4480792 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattga |
236 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4480793 |
gccttttgcttcatcttctttcctttctctcccaccaacaattcattga |
4480841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 261
Target Start/End: Original strand, 4516302 - 4516494
Alignment:
| Q |
69 |
aaaaaattacttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgc |
168 |
Q |
| |
|
||||||| |||| ||| | ||||| ||| |||| ||||||||| |||| ||| |||||||||| |||||||||||| || ||||| ||| |||||| || |
|
|
| T |
4516302 |
aaaaaatcactttaatctaattttgtttgagcagcacctccttaatcactttttccaagttcacatatgaacaaccacctggtcttgtgtcctcctctgc |
4516401 |
T |
|
| Q |
169 |
cttcttcttcaactcgattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
|||||||||||| || || ||||||| |||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||| ||||| |
|
|
| T |
4516402 |
cttcttcttcaattccatggccttttgcctcatcttctttcctttatctcccaccattaattcattgatcagcttctccacctcctctctctt |
4516494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 4515253 - 4515080
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||| |||||| | || ||| |||| ||| ||| || |||||||| |||||||| || |
|
|
| T |
4515253 |
attttgtttaagcaacacctccttgatcactttgtccaagttcaagtatgaagacccgccaagtctagtgtcctcgtctgccttctttttcaactccata |
4515154 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||||||||||| || || |||||||| ||||| |
|
|
| T |
4515153 |
acctttttcctcattttatttcctttctctcccaccatcaattcattgacaagcttttcaacctcctctctctt |
4515080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 84 - 237
Target Start/End: Original strand, 4557121 - 4557274
Alignment:
| Q |
84 |
tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactc |
183 |
Q |
| |
|
||||||||| ||||||||| |||||||| |||| ||| ||||| ||||| ||||||||||| |||||||||||| ||||||||||||| |||||| ||| |
|
|
| T |
4557121 |
tttgattttgtttaagcaaaacctccttaatcactttttccaaattcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcgtcttcatctc |
4557220 |
T |
|
| Q |
184 |
gattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgac |
237 |
Q |
| |
|
||| |||||||| |||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
4557221 |
aattatctttttccacatcttctttcctttctccccctccatcaattcattgac |
4557274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 265
Target Start/End: Original strand, 3171747 - 3171918
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
||||||||| |||||||| |||| ||| ||||||||||| ||||||||||| ||| ||| || |||||| ||||||||||||||||| || ||| || |
|
|
| T |
3171747 |
tttaagcaagacctccttaatcactttatccaagttcatgtatgaacaaccaccaaatcttgtatcctcctctgccttcttcttcaactccatggccctt |
3171846 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctttaca |
265 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| | ||||||||| |
|
|
| T |
3171847 |
tgcctcatcttctttcctttctctcccaccatcaattcgttgatcagtttctctacctcccctctctttaca |
3171918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 265
Target Start/End: Complemental strand, 4490481 - 4490310
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
|||||||| || ||||| |||| ||||||||||||||| ||||||| ||| || |||||||| |||| | ||||||||||||||||| | |||||| |
|
|
| T |
4490481 |
tttaagcatgacatccttaatcactttgtccaagttcatgtatgaactaccaccgagtctcgtgtcctccgctgccttcttcttcaactccgtcgccttt |
4490382 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctttaca |
265 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||| |
|
|
| T |
4490381 |
tgcctcatcttctttcctttctctcccaccatcaattcattgatcagtttctctacctcttctctctttaca |
4490310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 261
Target Start/End: Original strand, 4598162 - 4598344
Alignment:
| Q |
79 |
ttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttc |
178 |
Q |
| |
|
|||| ||||||| | |||||| ||||||||||| |||| ||| || |||||||| ||||||||||||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
4598162 |
ttaagtttgattctgtttaagaaacacctccttaatcactttctctaagttcatgtatgaacaacctccaagtctcgtttcctcctccgccttcatcttc |
4598261 |
T |
|
| Q |
179 |
aactcgattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
|| || |||| ||||| |||||| ||||||||||| |||||| ||||||||| ||||| || |||||||||||||| ||||| |
|
|
| T |
4598262 |
aaatcaattgtcttttgcctcattttctttcctttatctcccgacatcaattcgttgaccagcttctccacctcctctctctt |
4598344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 4469809 - 4469976
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
||||||||| || ||||| || | ||||||||||||| | |||||| |||||||||||| || ||||||| |||||||||| ||||| || |||| |
|
|
| T |
4469809 |
tttaagcaagacatccttaatgactttgtccaagttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaactccatgatcttt |
4469908 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
| ||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||| || ||||| |
|
|
| T |
4469909 |
tccctcatcttctttccattctctccaaccatcaattcattgactagcttctccacctcatctctctt |
4469976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 4492955 - 4493116
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| ||||||||| || |||||||||| ||||||||||||||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| | |
|
|
| T |
4492955 |
attttgtttaagcaagacatccttgatcactttgtccaagttcatgtatgaacaaccaccaggtactgtgtcctcctctgccttctttttcaactccgtg |
4493054 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccac |
249 |
Q |
| |
|
|| ||| |||||||||| |||||||||||||| ||||| | |||||||| || |||||||| |
|
|
| T |
4493055 |
gcttttctcctcatcttgtttcctttctctccaaccataatctcattgaccagattctccac |
4493116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 236
Target Start/End: Original strand, 4617022 - 4617170
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| |||||||||||| ||||| || | ||||| ||||||||| ||||||||||| || ||||| ||| ||||||| ||||||||||||||||| || |
|
|
| T |
4617022 |
attttgtttaagcaacacatccttaataactttgttcaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaactccatg |
4617121 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattga |
236 |
Q |
| |
|
||||||| | |||| ||||||||||| ||||| | |||| |||||||| |
|
|
| T |
4617122 |
gccttttgcttcattttctttcctttatctccggctatcacttcattga |
4617170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 88 - 246
Target Start/End: Original strand, 4505857 - 4506015
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| |||||||||||||||||| || | ||||||||||||||| |||||||||| |||||||| || ||||| ||| |||| |||||||| || |
|
|
| T |
4505857 |
attttgtttaagcaacacctccttaataactttgtccaagttcatgaatgaacaaccaccaggtcttgtatcctcctttgccctctttttcaactccatg |
4505956 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctc |
246 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||| | ||||| ||| || ||||| |
|
|
| T |
4505957 |
acctttttcctcatcttgtttcctttctctccaaccataatttcatcgaccagcttctc |
4506015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 261
Target Start/End: Original strand, 4461123 - 4461296
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| ||||||||| || ||||| || | ||||||||||||| | |||||| |||||||||||| || ||||||| |||||||||| || || || |
|
|
| T |
4461123 |
attttgtttaagcaagacatccttaatgactttgtccaagttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaattccatg |
4461222 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
|||||| ||||||||||||||| ||||||| ||||||||||| ||||| | ||||||||||| |||||||| |
|
|
| T |
4461223 |
accttttgcctcatcttctttccaatctctccaaccatcaattcgttgaccaacttctccacctcatccctctt |
4461296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 261
Target Start/End: Original strand, 4601789 - 4601962
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| |||||||||||||||||| || | |||||||| |||| | ||||||||||| || |||| |||||||||| ||| ||||||||||||| || |
|
|
| T |
4601789 |
attttgtttaagcaacacctccttaataactttgtccaggttcttgtatgaacaaccacctagtctagtgctctcctttgccatcttcttcaactccatg |
4601888 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
||||||| |||||||||||| ||||| ||||| | |||| |||||||| || ||| ||| |||||| ||||| |
|
|
| T |
4601889 |
gccttttgcctcatcttcttgcctttatctccggctatcacttcattgatcagcttcgccaactcctctctctt |
4601962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 237
Target Start/End: Complemental strand, 4267292 - 4267149
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
|||||||| |||||||| || | ||||||||||||||| |||||| |||| |||||||| ||| |||| || |||||| |||||||||| | | ||| |
|
|
| T |
4267292 |
tttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcctcttcaactccaagacattt |
4267193 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgac |
237 |
Q |
| |
|
| | ||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
4267192 |
tgcttcatcatatttcctttctctcccaccatcaattcattgac |
4267149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 4625957 - 4626124
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
||||||||| || || || |||| ||| |||| ||||| ||||||||||| || || || || ||||||| ||||||||||||||||| || |||||| |
|
|
| T |
4625957 |
tttaagcaagacatcattaatcagtttatccatattcatgtatgaacaaccaccgggactaatgttctcctctgccttcttcttcaactccatggccttt |
4626056 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
| ||||||||||||||| || ||||| |||||||| |||||| |||||||| ||| |||||||||| |
|
|
| T |
4626057 |
tgcctcatcttctttccgttatctcctgccatcaatgcattgatcagtttctctaccccctccctctt |
4626124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 107 - 261
Target Start/End: Original strand, 4568072 - 4568229
Alignment:
| Q |
107 |
tccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgc---cttcttcttcaactcgattgcctttttcctcatct |
203 |
Q |
| |
|
||||| |||| ||||||||||||||| |||||| || | |||||||| ||| || ||| || ||||||||||||||| | ||||||| |||||||| |
|
|
| T |
4568072 |
tccttaatcactttgtccaagttcatgtatgaagaatcaccaggtcttgtgtccttctctgccttcttcttcttcaactccacggccttttgcctcatct |
4568171 |
T |
|
| Q |
204 |
tctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
| |||||||||| ||||||||| |||||||| | || |||||||||||||| ||||| |
|
|
| T |
4568172 |
tttttcctttctgtcccaccattaattcattcatcagcttctccacctcctctctctt |
4568229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 4622148 - 4622290
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
|||||||| |||||||| || | |||||||||||| | ||||||||||| ||||| || || |||| || ||||||| ||||||||| || |||||| |
|
|
| T |
4622148 |
tttaagcatgacctccttaataactttgtccaagttgttgtatgaacaaccaccagggctggtcgtctcatctgccttctccttcaactccatggccttt |
4622247 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattga |
236 |
Q |
| |
|
| ||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
4622248 |
tgtctcatcttctttcctttatctcccgacatcaattcattga |
4622290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 4392152 - 4392048
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||||| ||||| |||| ||||||| ||| ||||| |||||||||||||||||||| |||||| |
|
|
| T |
4392152 |
tttaagcaagacctccttaatcagtttgtccaagttcatgaatgaagaaccaccaggtcatgtgtcctcctttgccttcttcttcaactcgatcgccttt |
4392053 |
T |
|
| Q |
194 |
ttcct |
198 |
Q |
| |
|
||||| |
|
|
| T |
4392052 |
ttcct |
4392048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 4256738 - 4256571
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
|||||||| |||||||| || | ||||||||||||||| ||||| ||| | || || ||| ||| ||| | |||||||||||| || || ||||| |
|
|
| T |
4256738 |
tttaagcatgacctccttaataactttgtccaagttcatcaatgaatgaccagctgggctggtgttcttctctgtcttcttcttcaattccatgaccttt |
4256639 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
| |||||||||||||||||| |||||| |||||||||||||| || ||||||||||| || ||||| |
|
|
| T |
4256638 |
tgcctcatcttctttcctttttctcccgacatcaattcattgatcagattctccacctcatctctctt |
4256571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 255
Target Start/End: Complemental strand, 4299866 - 4299711
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
|||||||| |||||||| || | ||||||||||||||| || |||||||| || || | ||| ||||||| |||||| ||||| |||||||| |
|
|
| T |
4299866 |
tttaagcagaacctccttaataactttgtccaagttcatgtacgaacaaccacctggattagtgttctcctctgccttc------aactcccttgccttt |
4299773 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctc |
255 |
Q |
| |
|
| |||||||| | ||||||||||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
4299772 |
tgtctcatcttatctcctttctctcccaccatcaattcattgatcagcttttccacctcctc |
4299711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 4260256 - 4260162
Alignment:
| Q |
118 |
tttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgcctttttcctcatcttctttcctt |
212 |
Q |
| |
|
||||||||||||||| ||||| |||| || || ||| ||||||| |||||| |||||||||| || |||||| ||||||||||||||||| |
|
|
| T |
4260256 |
tttgtccaagttcatcaatgaataaccagatggactggtgttctcctctgccttcctcttcaactccatgaccttttgcctcatcttctttcctt |
4260162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 4607027 - 4606957
Alignment:
| Q |
84 |
tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctc |
154 |
Q |
| |
|
||||||||| ||||||||| |||| ||| |||| ||| ||||||||||| |||||| |||| || |||||| |
|
|
| T |
4607027 |
tttgattttgtttaagcaaaaccttcttaatcactttttccaagttcatgtatgaaaaaccacctggtctc |
4606957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 4457715 - 4457767
Alignment:
| Q |
209 |
cctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
||||| ||||||||||||||||||||||| | ||||||||||| || ||||| |
|
|
| T |
4457715 |
cctttttctcccaccatcaattcattgactaacttctccacctcatctctctt |
4457767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 20863986 - 20863802
Alignment:
| Q |
77 |
acttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttct |
176 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||| |||| | ||||| ||| |||||| |||||||||| |
|
|
| T |
20863986 |
acttaagtttgattttgtttaagcaacacctccttaatcactttgtccaagttcatatatgaaccaccttccggtcttgtgtcctcctctgccttcttct |
20863887 |
T |
|
| Q |
177 |
tcaactcgattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
||||||| ||| ||||| ||||||| || |||||||||||||||||||||||||||| || || ||||||||||||| ||||| |
|
|
| T |
20863886 |
tcaactcatttgtcttttgcctcatcctccttcctttctctcccaccatcaattcatttaccagcatctccacctcctctctctt |
20863802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 88 - 248
Target Start/End: Original strand, 1674226 - 1674386
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| |||||||||||| ||||| |||| ||||||||||||||| ||||||||||| || ||||| ||| ||||||| |||||||||||||| || || |
|
|
| T |
1674226 |
attttgtttaagcaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaattccatg |
1674325 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctcca |
248 |
Q |
| |
|
||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
1674326 |
gccttttgcctcatcttttttccattctctcccaccatcaattcattgataagcttctcca |
1674386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 261
Target Start/End: Complemental strand, 16686432 - 16686226
Alignment:
| Q |
57 |
actgctttgcataaaaaa--ttacttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctc |
154 |
Q |
| |
|
||||| |||||||||||| | ||||| ||||||||| ||||||||| |||||| | |||| ||| ||||||||||| ||||||||||| ||||||||| |
|
|
| T |
16686432 |
actgcattgcataaaaaaagtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtctc |
16686333 |
T |
|
| Q |
155 |
gtgctctcctccgccttcttcttcaactcgattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcct |
254 |
Q |
| |
|
| | || ||| ||||| | | || || ||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | |
|
|
| T |
16686332 |
gggtcttcgtccaccttcatttgcagttcaattatctttttcctcatcttctttcctttctctcccaccatcaattcattgaccaatttctccacctcat |
16686233 |
T |
|
| Q |
255 |
ccctctt |
261 |
Q |
| |
|
| ||||| |
|
|
| T |
16686232 |
ctctctt |
16686226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 88 - 248
Target Start/End: Complemental strand, 28000231 - 28000071
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| ||||| |||||| ||||| |||| ||||||||||||||| ||||||||||| || ||||| ||| ||||||| ||||| ||||||||||| || |
|
|
| T |
28000231 |
attttgtttaaacaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgcctttttcttcaactccatg |
28000132 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctcca |
248 |
Q |
| |
|
||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
28000131 |
gccttttgcctcatcttttttccattctctcccaccatcaattcattgataagcttctcca |
28000071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 237
Target Start/End: Original strand, 24103005 - 24103148
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
|||||||| |||||||| || | ||||||||||||||| |||||| |||| |||| ||| ||| |||| || ||||||||||| ||||| | ||||| |
|
|
| T |
24103005 |
tttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccagatcttgtgttctcttctgccttcttcttgaactccaagaccttt |
24103104 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgac |
237 |
Q |
| |
|
| | ||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
24103105 |
tgcttcatcgtctttccgttctctcccaccatcaattcattgac |
24103148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 3845 - 3678
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
||||||||| |||||||| || | |||||||| |||||| ||||||| ||| || ||||| ||| ||||||| ||||||||||| ||||| | |||||| |
|
|
| T |
3845 |
tttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttcttctttaactccacggccttt |
3746 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| || ||||| |
|
|
| T |
3745 |
tgcctcatcttctttcctttctctcccaccgtcaattcattgactagcttctccacctcatctctctt |
3678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 4812 - 4670
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
|||||||| |||||||| |||| ||||||||||||||| |||||||| || |||| || ||| ||||||| ||||||||||||||||| || |||||| |
|
|
| T |
4812 |
tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccaccagaactggtgttctcctctgccttcttcttcaactccatggccttt |
4713 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattga |
236 |
Q |
| |
|
| |||||||||| ||||||| |||||| |||||||||||||| |
|
|
| T |
4712 |
tgcctcatcttcattcctttatctcccgacatcaattcattga |
4670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 3086426 - 3086593
Alignment:
| Q |
94 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgattgccttt |
193 |
Q |
| |
|
||||||||| |||||||| || | ||||||||||||||| ||||||||||| || || ||| |||| || || |||||||| ||||| | ||| |
|
|
| T |
3086426 |
tttaagcaagacctccttaataactttgtccaagttcatgtatgaacaaccaccgatactggtgttctcttctgctttcttctttaactctgcgacattt |
3086525 |
T |
|
| Q |
194 |
ttcctcatcttctttcctttctctcccaccatcaattcattgacaagtttctccacctcctccctctt |
261 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||||| || ||||| |||||||| ||||| |
|
|
| T |
3086526 |
tgcctcatcttctttcctttatctcccaccatcaattcattgatcagcttctcgacctcctctctctt |
3086593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 1281114 - 1281238
Alignment:
| Q |
88 |
attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcttcttcaactcgatt |
187 |
Q |
| |
|
||||| ||||||||||| ||||| |||| |||||| |||||||| ||||||||||| || ||||| ||| ||||||||||| ||||||||| || || |
|
|
| T |
1281114 |
attttgtttaagcaacatttccttaatcactttgtcgaagttcatgtatgaacaaccacccggtctagtgttctcctccgccgccttcttcaattccatg |
1281213 |
T |
|
| Q |
188 |
gcctttttcctcatcttctttcctt |
212 |
Q |
| |
|
||||||| ||||| |||||||||| |
|
|
| T |
1281214 |
gccttttctctcatattctttcctt |
1281238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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