View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4381_high_55 (Length: 270)
Name: NF4381_high_55
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4381_high_55 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 6937194 - 6937434
Alignment:
| Q |
11 |
cacagacatctttcttaatttcagatgtttcatattctggaatcacatccaacatgcacattttcctattatgcttcttcctgcaattgatctgcagtgt |
110 |
Q |
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| T |
6937194 |
cacagacatctttcttaatttcagatgtttcatattctggaatcacatccaacatgcacattttcctattatgcttcttcctgcaattgatctgcagtgt |
6937293 |
T |
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| Q |
111 |
cctagttaagattataggttttcctgagaaacaaccagcaacataaacctcaattacaggaacagaaacatgttttcctttgaaaaaaccactattagat |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6937294 |
tctagttaagattataggttttcctgagaaacaaccagcaacataaacctcaatttcaggaacagaaacatgttttcctttgaaaaaaccactattagat |
6937393 |
T |
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| Q |
211 |
gccatttctgtttcacaattcatactccaatatctcttatc |
251 |
Q |
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| T |
6937394 |
gccatttctgtttcacaattcatactccaatatctcttatc |
6937434 |
T |
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