View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4381_high_75 (Length: 225)
Name: NF4381_high_75
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4381_high_75 |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 2393262 - 2393438
Alignment:
| Q |
10 |
catcatcatgctttgatcaaccgaaactcccacaaaaacattgtgtgattaaatacctcactctcaaggacagctgaatgaagtatttttccaccttgtt |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2393262 |
catcatcatgctttgatcaaccgaaactcccacaaaaacattgtgtgattaaatacctcactctcaaggacagctgaatgaagtatttttccaccttgtt |
2393361 |
T |
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| Q |
110 |
taactgtgttagctttgattttgaccatttgagttaccgatgcctaaaattccactatgtgtatggtaaagagcacc |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2393362 |
taactgtgttagctttgattttgaccatttgagttaccgatgcctaaaattccactatgtgtatggtaaagagcacc |
2393438 |
T |
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